RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 LINC00694P0DN24 101 aa12.6□□□□□ -0.39
RAB40C-205ENST00000539661 GAGE2AQ6NT46 116 aa12.6□□□□□ -0.39
RAB40C-205ENST00000539661 INSP01308 110 aa12.59□□□□□ -0.39
RAB40C-205ENST00000539661 CREBBPQ92793 2442 aa12.59□□□□□ -0.39
RAB40C-205ENST00000539661 DEFB112Q30KQ8 113 aa12.59□□□□□ -0.39
RAB40C-205ENST00000539661 A0A1B0GX51 115 aa12.58□□□□□ -0.39
RAB40C-205ENST00000539661 CRYGAP11844 174 aa12.58□□□□□ -0.39
RAB40C-205ENST00000539661 NIPBLQ6KC79 2804 aaeCLIP12.58□□□□□ -0.4
RAB40C-205ENST00000539661 CRPP02741 224 aa12.58□□□□□ -0.4
RAB40C-205ENST00000539661 SORL1Q92673 2214 aa12.58□□□□□ -0.4
RAB40C-205ENST00000539661 TRAV13-1A0A0B4J241 112 aa12.58□□□□□ -0.4
RAB40C-205ENST00000539661 TRBV10-1A0A0K0K1A3 114 aa12.58□□□□□ -0.4
RAB40C-205ENST00000539661 LRRC75A-AS1Q8N1F1 130 aa12.58□□□□□ -0.4
RAB40C-205ENST00000539661 C2orf48Q96LS8 159 aa12.58□□□□□ -0.4
RAB40C-205ENST00000539661 CDC42SE2Q9NRR3 84 aa12.57□□□□□ -0.4
RAB40C-205ENST00000539661 RPL36AP83881 106 aaKnown RBP12.57□□□□□ -0.4
RAB40C-205ENST00000539661 RPL36ALQ969Q0 106 aaKnown RBP12.57□□□□□ -0.4
RAB40C-205ENST00000539661 ACANP16112 2415 aa12.56□□□□□ -0.4
RAB40C-205ENST00000539661 ATP5J2P56134 94 aa12.56□□□□□ -0.4
RAB40C-205ENST00000539661 MAP6D1Q9H9H5 199 aa12.55□□□□□ -0.4
RAB40C-205ENST00000539661 DNAL4O96015 105 aa12.55□□□□□ -0.4
RAB40C-205ENST00000539661 Q9HAA7 133 aa12.55□□□□□ -0.4
RAB40C-205ENST00000539661 J3KT08 172 aa12.54□□□□□ -0.4
RAB40C-205ENST00000539661 H0YGX0 51 aa12.54□□□□□ -0.4
RAB40C-205ENST00000539661 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
RAB40C-205ENST00000539661 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
RAB40C-205ENST00000539661 OBSCN-AS1Q96MR7 158 aa12.53□□□□□ -0.4
RAB40C-205ENST00000539661 ITPR2Q14571 2701 aa12.53□□□□□ -0.4
RAB40C-205ENST00000539661 K7EQD1 137 aa12.53□□□□□ -0.4
RAB40C-205ENST00000539661 SLURP1P55000 103 aa12.53□□□□□ -0.4
RAB40C-205ENST00000539661 RPS28P62857 69 aaKnown RBP12.52□□□□□ -0.4
RAB40C-205ENST00000539661 Q6JHZ5 121 aa12.52□□□□□ -0.4
RAB40C-205ENST00000539661 LINC00337Q8N6G1 96 aa12.52□□□□□ -0.4
RAB40C-205ENST00000539661 SND1-IT1Q9HBX3 110 aa12.52□□□□□ -0.41
RAB40C-205ENST00000539661 IGKV2-28A0A075B6P5 120 aa12.51□□□□□ -0.41
RAB40C-205ENST00000539661 IGKV2D-28P01615 120 aa12.51□□□□□ -0.41
RAB40C-205ENST00000539661 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
RAB40C-205ENST00000539661 Q96MF0 132 aa12.51□□□□□ -0.41
RAB40C-205ENST00000539661 ZNF702PQ9H963 129 aa12.51□□□□□ -0.41
RAB40C-205ENST00000539661 KRTAP10-9P60411 292 aa12.5□□□□□ -0.41
RAB40C-205ENST00000539661 MIR7-3HGQ8N6C7 128 aa12.5□□□□□ -0.41
RAB40C-205ENST00000539661 COX7B2Q8TF08 81 aa12.5□□□□□ -0.41
RAB40C-205ENST00000539661 KLK5Q9Y337 293 aaPredicted RBP12.5□□□□□ -0.41
RAB40C-205ENST00000539661 SMIM11BQ8TCY0 68 aa12.49□□□□□ -0.41
RAB40C-205ENST00000539661 MTORP42345 2549 aa12.49□□□□□ -0.41
RAB40C-205ENST00000539661 TRGV1A0A0A0MS02 117 aa12.49□□□□□ -0.41
RAB40C-205ENST00000539661 HELZ2Q9BYK8 2649 aaKnown RBP12.48□□□□□ -0.41
RAB40C-205ENST00000539661 ITPR3Q14573 2671 aa12.48□□□□□ -0.41
RAB40C-205ENST00000539661 A0A087WYN8 130 aa12.48□□□□□ -0.41
RAB40C-205ENST00000539661 J3QLI3 93 aa12.48□□□□□ -0.41
RAB40C-205ENST00000539661 UBE2L6O14933 153 aa12.48□□□□□ -0.41
RAB40C-205ENST00000539661 DSCR9P59020 149 aa12.48□□□□□ -0.41
RAB40C-205ENST00000539661 TMEM243Q9BU79 118 aa12.48□□□□□ -0.41
RAB40C-205ENST00000539661 FLNAP21333 2647 aaKnown RBP12.47□□□□□ -0.41
RAB40C-205ENST00000539661 LINC01356Q8N9X3 169 aa12.47□□□□□ -0.41
RAB40C-205ENST00000539661 DYNLRB2Q8TF09 96 aa12.47□□□□□ -0.41
RAB40C-205ENST00000539661 C14orf132Q9NPU4 83 aa12.47□□□□□ -0.41
RAB40C-205ENST00000539661 DEFB136Q30KP8 78 aa12.46□□□□□ -0.41
RAB40C-205ENST00000539661 LOC107984640A0A0U1RRK4 108 aa12.45□□□□□ -0.42
RAB40C-205ENST00000539661 C1orf158Q8N1D5 194 aa12.45□□□□□ -0.42
RAB40C-205ENST00000539661 SERP2Q8N6R1 65 aa12.45□□□□□ -0.42
RAB40C-205ENST00000539661 XCL2Q9UBD3 114 aa12.45□□□□□ -0.42
RAB40C-205ENST00000539661 DEFB114Q30KQ6 69 aa12.44□□□□□ -0.42
RAB40C-205ENST00000539661 C5orf47Q569G3 176 aa12.44□□□□□ -0.42
RAB40C-205ENST00000539661 C18orf65Q6ZTR6 163 aa12.44□□□□□ -0.42
RAB40C-205ENST00000539661 LINC00846Q9NV44 126 aa12.44□□□□□ -0.42
RAB40C-205ENST00000539661 hADV29S1A0JD25 119 aa12.44□□□□□ -0.42
RAB40C-205ENST00000539661 IBA57-AS1B1ANH7 110 aa12.44□□□□□ -0.42
RAB40C-205ENST00000539661 Q6YL49 198 aa12.44□□□□□ -0.42
RAB40C-205ENST00000539661 CCL18P55774 89 aa12.43□□□□□ -0.42
RAB40C-205ENST00000539661 LINC00158P58513 81 aa12.43□□□□□ -0.42
RAB40C-205ENST00000539661 TMEM258P61165 79 aa12.43□□□□□ -0.42
RAB40C-205ENST00000539661 C9orf129Q5T035 196 aaKnown RBP12.43□□□□□ -0.42
RAB40C-205ENST00000539661 NOTCH2Q04721 2471 aa12.43□□□□□ -0.42
RAB40C-205ENST00000539661 C4orf3Q8WVX3 66 aa12.42□□□□□ -0.42
RAB40C-205ENST00000539661 FAM19A5Q7Z5A7 132 aaPredicted RBP12.42□□□□□ -0.42
RAB40C-205ENST00000539661 WNK1Q9H4A3 2382 aa12.42□□□□□ -0.42
RAB40C-205ENST00000539661 IGKV3D-7A0A0C4DH55 119 aa12.41□□□□□ -0.42
RAB40C-205ENST00000539661 Q6ZTI0 123 aa12.41□□□□□ -0.42
RAB40C-205ENST00000539661 LECT2O14960 151 aa12.41□□□□□ -0.42
RAB40C-205ENST00000539661 STHQ8IWL8 128 aa12.41□□□□□ -0.42
RAB40C-205ENST00000539661 UPK3BQ9BT76 320 aa12.41□□□□□ -0.42
RAB40C-205ENST00000539661 TOMM7Q9P0U1 55 aa12.41□□□□□ -0.42
RAB40C-205ENST00000539661 NOTCH3Q9UM47 2321 aa12.39□□□□□ -0.43
RAB40C-205ENST00000539661 TRAV25A0A0B4J276 109 aa12.39□□□□□ -0.43
RAB40C-205ENST00000539661 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
RAB40C-205ENST00000539661 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
RAB40C-205ENST00000539661 LY6G6DO95868 133 aa12.39□□□□□ -0.43
RAB40C-205ENST00000539661 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
RAB40C-205ENST00000539661 ORMDL1Q9P0S3 153 aa12.39□□□□□ -0.43
RAB40C-205ENST00000539661 FSHBP01225 129 aa12.38□□□□□ -0.43
RAB40C-205ENST00000539661 S100A7L2Q5SY68 101 aa12.38□□□□□ -0.43
RAB40C-205ENST00000539661 LINC01561Q8N1V8 128 aa12.38□□□□□ -0.43
RAB40C-205ENST00000539661 ZNF843Q8N446 348 aa12.38□□□□□ -0.43
RAB40C-205ENST00000539661 IGHV3OR16-9A0A0B4J2B5 98 aa12.38□□□□□ -0.43
RAB40C-205ENST00000539661 USP17L23D6RBM5 183 aa12.38□□□□□ -0.43
RAB40C-205ENST00000539661 HECTD1Q9ULT8 2610 aa12.37□□□□□ -0.43
RAB40C-205ENST00000539661 A0A087WZ39 114 aa12.37□□□□□ -0.43
RAB40C-205ENST00000539661 TRBV6-4A0A1B0GX49 114 aa12.37□□□□□ -0.43
RAB40C-205ENST00000539661 NCR3O14931 201 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms