RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 FAM208BQ5VWN6 2430 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 C10orf99Q6UWK7 81 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 SLPIP03973 132 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 POLR2KP53803 58 aaKnown RBP4.76□□□□□ -1.65
LSAMP-207ENST00000539563 COL27A1Q8IZC6 1860 aaPredicted RBP4.76□□□□□ -1.65
LSAMP-207ENST00000539563 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.76□□□□□ -1.65
LSAMP-207ENST00000539563 CSPG4Q6UVK1 2322 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.76□□□□□ -1.65
LSAMP-207ENST00000539563 CREBBPQ92793 2442 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 XAGE1AQ9HD64 81 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 Q8IZM0 81 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 C3orf22Q8N5N4 141 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 Q8N976 141 aa4.76□□□□□ -1.65
LSAMP-207ENST00000539563 V9GYY9 64 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 PLA2G2AP14555 144 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 ENHOQ6UWT2 76 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 C18orf65Q6ZTR6 163 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 SMIM11BQ8TCY0 68 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 SPEGQ15772 3267 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
LSAMP-207ENST00000539563 CCKP06307 115 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 CLUHP3Q96NS8 147 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 FAM236DA0A1B0GTK5 79 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 FAM236CP0DP71 79 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 CDC42SE2Q9NRR3 84 aa4.75□□□□□ -1.65
LSAMP-207ENST00000539563 K7ERS5 55 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.74□□□□□ -1.65
LSAMP-207ENST00000539563 LRCOL1A6NCL2 159 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 PRR9Q5T870 116 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 Q6ZS46 218 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 C20orf197Q8N268 126 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 C10orf142B7Z368 130 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 NDUFC2-KCTD14E9PQ53 114 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 BRI3O95415 125 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 C1orf158Q8N1D5 194 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 LOC100131303A0A0U1RQF7 123 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 ANKHD1Q8IWZ3 2542 aaKnown RBP4.74□□□□□ -1.65
LSAMP-207ENST00000539563 LST1O00453 97 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 WFDC10BQ8IUB3 73 aa4.74□□□□□ -1.65
LSAMP-207ENST00000539563 MT-ATP8P03928 68 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 ASPMQ8IZT6 3477 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 UBE2D3P61077 147 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 UBE2D2P62837 147 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 C2orf91Q6ZV80 131 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 A0A096LNI7 61 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 MRPL55Q7Z7F7 128 aaKnown RBP4.73□□□□□ -1.65
LSAMP-207ENST00000539563 CHCHD7Q9BUK0 85 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 SCXQ7RTU7 201 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 IGKV2-28A0A075B6P5 120 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 IGKV2D-28P01615 120 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 PCSK5Q92824 1860 aa4.73□□□□□ -1.65
LSAMP-207ENST00000539563 ZNF580Q9UK33 172 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 NAV3Q8IVL0 2385 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 F8WDY8 70 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 C11orf21Q9P2W6 132 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 ZFHX2Q9C0A1 2572 aaPredicted RBP4.72□□□□□ -1.65
LSAMP-207ENST00000539563 C16orf95Q9H693 158 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 A0A0J9YWU9 116 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 IGHV4-30-4P0DP06 118 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 IGLV2-18A0A075B6J9 118 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 IGIPA6NJ69 53 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 MRPS12O15235 138 aaKnown RBP4.72□□□□□ -1.65
LSAMP-207ENST00000539563 NUPR2A6NF83 97 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 WFDC10AQ9H1F0 79 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 C3orf84H3BNL1 204 aa4.72□□□□□ -1.65
LSAMP-207ENST00000539563 PLAC8L1A1L4L8 177 aa4.71□□□□□ -1.65
LSAMP-207ENST00000539563 C10orf25Q5T742 122 aa4.71□□□□□ -1.65
LSAMP-207ENST00000539563 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
LSAMP-207ENST00000539563 Q6ZQY7 126 aa4.71□□□□□ -1.66
LSAMP-207ENST00000539563 NANOS2P60321 138 aaKnown RBP4.71□□□□□ -1.66
LSAMP-207ENST00000539563 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
LSAMP-207ENST00000539563 CSDC2Q9Y534 153 aaKnown RBP4.71□□□□□ -1.66
LSAMP-207ENST00000539563 A8MZ25 164 aa4.7□□□□□ -1.66
LSAMP-207ENST00000539563 COX8CQ7Z4L0 72 aa4.7□□□□□ -1.66
LSAMP-207ENST00000539563 FAM19A3Q7Z5A8 133 aa4.7□□□□□ -1.66
LSAMP-207ENST00000539563 FAM240AA0A1B0GVK7 77 aa4.7□□□□□ -1.66
LSAMP-207ENST00000539563 IGLV1-51P01701 117 aa4.7□□□□□ -1.66
LSAMP-207ENST00000539563 ZFHX3Q15911 3703 aa4.7□□□□□ -1.66
LSAMP-207ENST00000539563 WDFY4Q6ZS81 3184 aa4.7□□□□□ -1.66
LSAMP-207ENST00000539563 LY6G6CO95867 125 aa4.7□□□□□ -1.66
LSAMP-207ENST00000539563 RPL37AP8A6NKH3 93 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 M0R2N4 97 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 CYSRT1A8MQ03 144 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 ZNF73O43830 326 aaPredicted RBP4.69□□□□□ -1.66
LSAMP-207ENST00000539563 EGFEM1PQ0D2K5 195 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 CDSNQ15517 529 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 LINC01561Q8N1V8 128 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 PRM2P04554 102 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
LSAMP-207ENST00000539563 RPL28P46779 137 aaKnown RBP4.69□□□□□ -1.66
LSAMP-207ENST00000539563 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 PTPN13Q12923 2485 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 POM121L12Q8N7R1 296 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 LINC00526Q96FQ7 95 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 IGLV9-49A0A0B4J1Y8 123 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 PPDPFQ9H3Y8 114 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 AVPP01185 164 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms