RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 SS18L2Q9UHA2 77 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 SVIPQ8NHG7 77 aa6.88□□□□□ -1.31
CDH13-204ENST00000539548 Q6ZTI0 123 aa6.88□□□□□ -1.31
CDH13-204ENST00000539548 IMUPQ9GZP8 106 aa6.87□□□□□ -1.31
CDH13-204ENST00000539548 PF4P02776 101 aa6.86□□□□□ -1.31
CDH13-204ENST00000539548 BAALC-AS2P0C853 105 aa6.86□□□□□ -1.31
CDH13-204ENST00000539548 Q96MF0 132 aa6.86□□□□□ -1.31
CDH13-204ENST00000539548 TMEM243Q9BU79 118 aa6.86□□□□□ -1.31
CDH13-204ENST00000539548 ANKRD17O75179 2603 aaKnown RBP6.86□□□□□ -1.31
CDH13-204ENST00000539548 HIST2H2BCQ6DN03 193 aa6.86□□□□□ -1.31
CDH13-204ENST00000539548 HIST2H2BDQ6DRA6 164 aa6.86□□□□□ -1.31
CDH13-204ENST00000539548 TEP1Q99973 2627 aaKnown RBP6.86□□□□□ -1.31
CDH13-204ENST00000539548 FAM222AQ5U5X8 452 aa6.85□□□□□ -1.31
CDH13-204ENST00000539548 C22orf24Q9Y442 160 aa6.85□□□□□ -1.31
CDH13-204ENST00000539548 ITPR2Q14571 2701 aa6.85□□□□□ -1.31
CDH13-204ENST00000539548 TRAV13-2A0A0B4J235 113 aa6.85□□□□□ -1.31
CDH13-204ENST00000539548 UBE2L6O14933 153 aa6.85□□□□□ -1.31
CDH13-204ENST00000539548 RPL28P46779 137 aaKnown RBP6.85□□□□□ -1.31
CDH13-204ENST00000539548 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
CDH13-204ENST00000539548 TMEM86BQ8N661 226 aa6.85□□□□□ -1.31
CDH13-204ENST00000539548 LINC00643Q86TS7 51 aa6.84□□□□□ -1.31
CDH13-204ENST00000539548 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
CDH13-204ENST00000539548 FAM218AQ96MZ4 157 aa6.84□□□□□ -1.31
CDH13-204ENST00000539548 NOP10Q9NPE3 64 aaKnown RBP6.84□□□□□ -1.31
CDH13-204ENST00000539548 MXRA5Q9NR99 2828 aa6.84□□□□□ -1.32
CDH13-204ENST00000539548 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.32
CDH13-204ENST00000539548 TRBV6-4A0A1B0GX49 114 aa6.83□□□□□ -1.32
CDH13-204ENST00000539548 CHCHD5Q9BSY4 110 aa6.83□□□□□ -1.32
CDH13-204ENST00000539548 ABCA12Q86UK0 2595 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 CCL24O00175 119 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 GIG44P09565 113 aaPredicted RBP6.82□□□□□ -1.32
CDH13-204ENST00000539548 INAFM2P0DMQ5 153 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 DEFB113Q30KQ7 82 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 LRRC75A-AS1Q8N1F1 130 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 SMCR5Q8TEV8 140 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 ZANQ9Y493 2812 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 PLAC8L1A1L4L8 177 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 CRPP02741 224 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 C16orf74Q96GX8 76 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 OVOL2Q9BRP0 275 aa6.82□□□□□ -1.32
CDH13-204ENST00000539548 IGKV2-28A0A075B6P5 120 aa6.81□□□□□ -1.32
CDH13-204ENST00000539548 IGKV2D-28P01615 120 aa6.81□□□□□ -1.32
CDH13-204ENST00000539548 MALP21145 153 aa6.81□□□□□ -1.32
CDH13-204ENST00000539548 KRTAP10-9P60411 292 aa6.81□□□□□ -1.32
CDH13-204ENST00000539548 LINC00337Q8N6G1 96 aa6.81□□□□□ -1.32
CDH13-204ENST00000539548 SND1-IT1Q9HBX3 110 aa6.81□□□□□ -1.32
CDH13-204ENST00000539548 LOC100131303A0A0U1RQF7 123 aa6.81□□□□□ -1.32
CDH13-204ENST00000539548 TRGV2A0A075B6R0 118 aa6.8□□□□□ -1.32
CDH13-204ENST00000539548 A0A1W2PRX2 142 aa6.8□□□□□ -1.32
CDH13-204ENST00000539548 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 IBA57-AS1B1ANH7 110 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 H0YGX0 51 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 CXCL5P42830 114 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 TRGV4A0A0C4DH28 118 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 CCL18P55774 89 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 LINC00158P58513 81 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 SMIM11BQ8TCY0 68 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 FAM110AQ9BQ89 295 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 Q9HAA7 133 aa6.79□□□□□ -1.32
CDH13-204ENST00000539548 IGLV4-60A0A075B6I1 120 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 A0A087WZ39 114 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 TRBV6-8A0A0A6YYG3 113 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 DNAJC9-AS1A6NH13 148 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 FHL2Q14192 279 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 C11orf44Q8N8P7 122 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 CSNK1G2-AS1Q8NCQ2 148 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 POLQO75417 2590 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 ATP5G1P05496 136 aa6.78□□□□□ -1.32
CDH13-204ENST00000539548 FBN2P35556 2912 aa6.77□□□□□ -1.33
CDH13-204ENST00000539548 GAGE2AQ6NT46 116 aa6.77□□□□□ -1.33
CDH13-204ENST00000539548 TMEM126AQ9H061 195 aa6.77□□□□□ -1.33
CDH13-204ENST00000539548 C19orf73Q9NVV2 129 aa6.77□□□□□ -1.33
CDH13-204ENST00000539548 A0A087WYN8 130 aa6.76□□□□□ -1.33
CDH13-204ENST00000539548 IGKV3OR2-268A0A0C4DH90 116 aa6.76□□□□□ -1.33
CDH13-204ENST00000539548 DNAL4O96015 105 aa6.76□□□□□ -1.33
CDH13-204ENST00000539548 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
CDH13-204ENST00000539548 OBSCN-AS1Q96MR7 158 aa6.76□□□□□ -1.33
CDH13-204ENST00000539548 C2CD3Q4AC94 2353 aa6.76□□□□□ -1.33
CDH13-204ENST00000539548 WNK1Q9H4A3 2382 aa6.76□□□□□ -1.33
CDH13-204ENST00000539548 RPL35AP18077 110 aaKnown RBP6.76□□□□□ -1.33
CDH13-204ENST00000539548 IGLV1-51P01701 117 aa6.75□□□□□ -1.33
CDH13-204ENST00000539548 WFDC10AQ9H1F0 79 aa6.75□□□□□ -1.33
CDH13-204ENST00000539548 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
CDH13-204ENST00000539548 C3orf22Q8N5N4 141 aa6.75□□□□□ -1.33
CDH13-204ENST00000539548 ESM1Q9NQ30 184 aa6.75□□□□□ -1.33
CDH13-204ENST00000539548 CSMD2Q7Z408 3487 aa6.74□□□□□ -1.33
CDH13-204ENST00000539548 PFN2P35080 140 aa6.74□□□□□ -1.33
CDH13-204ENST00000539548 UQCRQO14949 82 aa6.74□□□□□ -1.33
CDH13-204ENST00000539548 PAX4O43316 350 aa6.74□□□□□ -1.33
CDH13-204ENST00000539548 LY6G6DO95868 133 aa6.74□□□□□ -1.33
CDH13-204ENST00000539548 SMIM20Q8N5G0 67 aa6.74□□□□□ -1.33
CDH13-204ENST00000539548 C6orf226Q5I0X4 101 aa6.73□□□□□ -1.33
CDH13-204ENST00000539548 C9orf129Q5T035 196 aaKnown RBP6.73□□□□□ -1.33
CDH13-204ENST00000539548 LINC00526Q96FQ7 95 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms