RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LCN9Q8WX39 176 aa-0.06□□□□□ -2.42
CCDC7-209ENST00000539197 KDM3BQ7LBC6 1761 aa-0.06□□□□□ -2.42
CCDC7-209ENST00000539197 hADV29S1A0JD25 119 aa-0.07□□□□□ -2.42
CCDC7-209ENST00000539197 CRYM-AS1A6NIL9 109 aa-0.07□□□□□ -2.42
CCDC7-209ENST00000539197 FAM223BA6NKX1 122 aa-0.07□□□□□ -2.42
CCDC7-209ENST00000539197 H3BQ15 152 aa-0.07□□□□□ -2.42
CCDC7-209ENST00000539197 COX6CP09669 75 aa-0.07□□□□□ -2.42
CCDC7-209ENST00000539197 LINC01600Q96MT4 127 aa-0.07□□□□□ -2.42
CCDC7-209ENST00000539197 ZFHX3Q15911 3703 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 CUL7Q14999 1698 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 POLA1P09884 1462 aaPredicted RBP-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 SHROOM2Q13796 1616 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 A0A1B0GWA3 101 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 SPRR1BP22528 89 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 DEFB123Q8N688 67 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 C12orf57Q99622 126 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 PCLOQ9Y6V0 5065 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 NCOA3Q9Y6Q9 1424 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 ARHGEF5Q12774 1597 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 EHBP1L1Q8N3D4 1523 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 KDM5AP29375 1690 aaKnown RBP-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 MYOM1P52179 1685 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 WNK3Q9BYP7 1800 aa-0.08□□□□□ -2.42
CCDC7-209ENST00000539197 MYH8P13535 1937 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 MUC2Q02817 5179 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 LINC00959A0A1B0GUT2 108 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 TMEM262E9PQX1 116 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 PRM1P04553 51 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 COX6B1P14854 86 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 S100PP25815 95 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 SEC11AP67812 179 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 PLXNB2O15031 1838 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 DOCK2Q92608 1830 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 TET3O43151 1660 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 PPRC1Q5VV67 1664 aaKnown RBP-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 ARHGAP5Q13017 1502 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 CHD6Q8TD26 2715 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 PAPPAQ13219 1627 aa-0.09□□□□□ -2.42
CCDC7-209ENST00000539197 ADGRL2O95490 1459 aa-0.1□□□□□ -2.42
CCDC7-209ENST00000539197 WDR7Q9Y4E6 1490 aa-0.1□□□□□ -2.42
CCDC7-209ENST00000539197 PKDREJQ9NTG1 2253 aa-0.1□□□□□ -2.42
CCDC7-209ENST00000539197 HSPG2P98160 4391 aa-0.1□□□□□ -2.42
CCDC7-209ENST00000539197 TENM4Q6N022 2769 aa-0.1□□□□□ -2.42
CCDC7-209ENST00000539197 PSME4Q14997 1843 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 PTPN13Q12923 2485 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 FLNCQ14315 2725 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 ABCC5O15440 1437 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 LPAP08519 4548 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 PLCE1Q9P212 2302 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 KMT2AQ03164 3969 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 TRBV7-4A0A0J9YYF1 115 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 SAA2P0DJI9 122 aaPredicted RBP-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 KRTDAPP60985 99 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 C14orf144Q96I85 54 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 NSD1Q96L73 2696 aaPredicted RBP-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 ARHGEF12Q9NZN5 1544 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 RAPGEF6Q8TEU7 1601 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 USF3Q68DE3 2245 aa-0.1□□□□□ -2.43
CCDC7-209ENST00000539197 EIF4G3O43432 1585 aaKnown RBP-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 MAPKBP1O60336 1514 aa-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 ATP6V1G2-DDX39BF2Z307 99 aa-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 K7EQZ3 153 aa-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 GNGT2O14610 69 aa-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 CGREF1Q99674 301 aa-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 PRO1933Q9H354 126 aa-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 NRKQ7Z2Y5 1582 aa-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 GOLGA4Q13439 2230 aaKnown RBP-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 FAT2Q9NYQ8 4349 aa-0.11□□□□□ -2.43
CCDC7-209ENST00000539197 NCOR1O75376 2440 aa-0.12□□□□□ -2.43
CCDC7-209ENST00000539197 TULP4Q9NRJ4 1543 aa-0.12□□□□□ -2.43
CCDC7-209ENST00000539197 A0A0G2JND7 137 aa-0.12□□□□□ -2.43
CCDC7-209ENST00000539197 TMEM218A2RU14 115 aa-0.12□□□□□ -2.43
CCDC7-209ENST00000539197 ASIPP42127 132 aa-0.12□□□□□ -2.43
CCDC7-209ENST00000539197 MAGI1Q96QZ7 1491 aaPredicted RBP-0.12□□□□□ -2.43
CCDC7-209ENST00000539197 SPTBN1Q01082 2364 aaKnown RBP-0.12□□□□□ -2.43
CCDC7-209ENST00000539197 SBF2Q86WG5 1849 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 MYO7BQ6PIF6 2116 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 VWFP04275 2813 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 PKD1L1Q8TDX9 2849 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 GAPVD1Q14C86 1478 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 C1orf167Q5SNV9 1468 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 TNXBP22105 4242 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 A0A087WVE0 104 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 C7orf77A4D0Y5 90 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 MT-ATP8P03928 68 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 SPRR2DP22532 72 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 S100A10P60903 97 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 FXYD6Q9H0Q3 95 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 LINC00846Q9NV44 126 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 CACFD1Q9UGQ2 172 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 PIEZO2Q9H5I5 2752 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 FAM135AQ9P2D6 1515 aa-0.13□□□□□ -2.43
CCDC7-209ENST00000539197 MYCBP2O75592 4640 aa-0.14□□□□□ -2.43
CCDC7-209ENST00000539197 TCEAL7Q9BRU2 100 aa-0.14□□□□□ -2.43
CCDC7-209ENST00000539197 GVINP1Q7Z2Y8 2422 aa-0.14□□□□□ -2.43
CCDC7-209ENST00000539197 LRP2P98164 4655 aa-0.15□□□□□ -2.43
CCDC7-209ENST00000539197 SPHKAPQ2M3C7 1700 aa-0.15□□□□□ -2.43
CCDC7-209ENST00000539197 CC2D2AQ9P2K1 1620 aa-0.15□□□□□ -2.43
CCDC7-209ENST00000539197 TRAV30A0A087WSZ9 112 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms