RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 DGAT2L7PQ6IED9 249 aa10.43□□□□□ -0.74
CDCA3-207ENST00000538862 CDIP1Q9H305 208 aa10.43□□□□□ -0.74
CDCA3-207ENST00000538862 CSDC2Q9Y534 153 aaKnown RBP10.43□□□□□ -0.74
CDCA3-207ENST00000538862 H7C2G1 150 aa10.43□□□□□ -0.74
CDCA3-207ENST00000538862 ATXN8Q156A1 80 aa10.43□□□□□ -0.74
CDCA3-207ENST00000538862 Q1RN00 199 aa10.43□□□□□ -0.74
CDCA3-207ENST00000538862 LINC01600Q96MT4 127 aa10.43□□□□□ -0.74
CDCA3-207ENST00000538862 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
CDCA3-207ENST00000538862 IFITM1P13164 125 aa10.42□□□□□ -0.74
CDCA3-207ENST00000538862 FAM19A3Q7Z5A8 133 aa10.42□□□□□ -0.74
CDCA3-207ENST00000538862 ANKRD29Q8N6D5 301 aa10.42□□□□□ -0.74
CDCA3-207ENST00000538862 C9JAW5 83 aa10.41□□□□□ -0.74
CDCA3-207ENST00000538862 CCL24O00175 119 aa10.41□□□□□ -0.74
CDCA3-207ENST00000538862 TMEM126AQ9H061 195 aa10.41□□□□□ -0.74
CDCA3-207ENST00000538862 CDKN2A-AS1Q9UH64 79 aa10.41□□□□□ -0.74
CDCA3-207ENST00000538862 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
CDCA3-207ENST00000538862 TRGV1A0A0A0MS02 117 aa10.41□□□□□ -0.74
CDCA3-207ENST00000538862 A8MZ25 164 aa10.4□□□□□ -0.74
CDCA3-207ENST00000538862 NDUFA1O15239 70 aa10.4□□□□□ -0.74
CDCA3-207ENST00000538862 CMC4P56277 68 aaPredicted RBP10.4□□□□□ -0.74
CDCA3-207ENST00000538862 HERVK_113P63121 156 aa10.4□□□□□ -0.74
CDCA3-207ENST00000538862 RPL36AP83881 106 aaKnown RBP10.4□□□□□ -0.74
CDCA3-207ENST00000538862 RPL36ALQ969Q0 106 aaKnown RBP10.4□□□□□ -0.74
CDCA3-207ENST00000538862 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
CDCA3-207ENST00000538862 IGHV3OR16-12A0A075B7B8 117 aa10.39□□□□□ -0.75
CDCA3-207ENST00000538862 DAZ2Q13117 558 aaKnown RBP10.39□□□□□ -0.75
CDCA3-207ENST00000538862 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
CDCA3-207ENST00000538862 DAZ4Q86SG3 579 aaKnown RBP10.39□□□□□ -0.75
CDCA3-207ENST00000538862 DAZ3Q9NR90 486 aaKnown RBP10.39□□□□□ -0.75
CDCA3-207ENST00000538862 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
CDCA3-207ENST00000538862 K7EQD1 137 aa10.39□□□□□ -0.75
CDCA3-207ENST00000538862 TRIAP1O43715 76 aa10.39□□□□□ -0.75
CDCA3-207ENST00000538862 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
CDCA3-207ENST00000538862 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
CDCA3-207ENST00000538862 CIRBPQ14011 172 aaKnown RBP10.38□□□□□ -0.75
CDCA3-207ENST00000538862 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
CDCA3-207ENST00000538862 MEGF8Q7Z7M0 2845 aa10.38□□□□□ -0.75
CDCA3-207ENST00000538862 MT-ATP8P03928 68 aa10.37□□□□□ -0.75
CDCA3-207ENST00000538862 COX6CP09669 75 aa10.37□□□□□ -0.75
CDCA3-207ENST00000538862 COX6A2Q02221 97 aa10.37□□□□□ -0.75
CDCA3-207ENST00000538862 LINC00242Q5T6M2 205 aa10.37□□□□□ -0.75
CDCA3-207ENST00000538862 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
CDCA3-207ENST00000538862 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
CDCA3-207ENST00000538862 TRBV10-2A0A0K0K1G8 114 aa10.36□□□□□ -0.75
CDCA3-207ENST00000538862 Q6ZTI0 123 aa10.36□□□□□ -0.75
CDCA3-207ENST00000538862 PPDPFQ9H3Y8 114 aa10.36□□□□□ -0.75
CDCA3-207ENST00000538862 NHLRC4P0CG21 123 aaPredicted RBP10.35□□□□□ -0.75
CDCA3-207ENST00000538862 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
CDCA3-207ENST00000538862 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
CDCA3-207ENST00000538862 NTM-AS1Q6ZSK4 140 aa10.35□□□□□ -0.75
CDCA3-207ENST00000538862 COPS9Q8WXC6 57 aa10.34□□□□□ -0.75
CDCA3-207ENST00000538862 RPL13AP40429 203 aaKnown RBP10.33□□□□□ -0.76
CDCA3-207ENST00000538862 XGP55808 180 aa10.33□□□□□ -0.76
CDCA3-207ENST00000538862 NPC2P61916 151 aa10.33□□□□□ -0.76
CDCA3-207ENST00000538862 Q9H8V8 135 aa10.33□□□□□ -0.76
CDCA3-207ENST00000538862 CDC42SE2Q9NRR3 84 aa10.33□□□□□ -0.76
CDCA3-207ENST00000538862 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
CDCA3-207ENST00000538862 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
CDCA3-207ENST00000538862 F8WDY8 70 aa10.32□□□□□ -0.76
CDCA3-207ENST00000538862 GIG44P09565 113 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-207ENST00000538862 Q6Q795 121 aa10.32□□□□□ -0.76
CDCA3-207ENST00000538862 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
CDCA3-207ENST00000538862 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-207ENST00000538862 C16orf74Q96GX8 76 aa10.32□□□□□ -0.76
CDCA3-207ENST00000538862 H7C423 109 aa10.31□□□□□ -0.76
CDCA3-207ENST00000538862 NDUFV3P56181 108 aaKnown RBP10.31□□□□□ -0.76
CDCA3-207ENST00000538862 TRAV13-1A0A0B4J241 112 aa10.31□□□□□ -0.76
CDCA3-207ENST00000538862 H3BT86 120 aa10.31□□□□□ -0.76
CDCA3-207ENST00000538862 LST1O00453 97 aa10.31□□□□□ -0.76
CDCA3-207ENST00000538862 DAND5Q8N907 189 aa10.31□□□□□ -0.76
CDCA3-207ENST00000538862 PLAC8L1A1L4L8 177 aa10.3□□□□□ -0.76
CDCA3-207ENST00000538862 F5H768 121 aa10.3□□□□□ -0.76
CDCA3-207ENST00000538862 OVOL2Q9BRP0 275 aa10.3□□□□□ -0.76
CDCA3-207ENST00000538862 TMEM243Q9BU79 118 aa10.3□□□□□ -0.76
CDCA3-207ENST00000538862 TRBV6-4A0A1B0GX49 114 aa10.29□□□□□ -0.76
CDCA3-207ENST00000538862 UBE2L6O14933 153 aa10.29□□□□□ -0.76
CDCA3-207ENST00000538862 IGLV1-51P01701 117 aa10.29□□□□□ -0.76
CDCA3-207ENST00000538862 C2orf82Q6UX34 121 aa10.29□□□□□ -0.76
CDCA3-207ENST00000538862 ZNF625Q96I27 306 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-207ENST00000538862 CCDC179H3BU77 68 aa10.29□□□□□ -0.76
CDCA3-207ENST00000538862 C19orf73Q9NVV2 129 aa10.29□□□□□ -0.76
CDCA3-207ENST00000538862 UBE2WQ96B02 151 aa10.28□□□□□ -0.76
CDCA3-207ENST00000538862 TRGV2A0A075B6R0 118 aa10.27□□□□□ -0.76
CDCA3-207ENST00000538862 TEX49A0A1B0GTD5 131 aa10.27□□□□□ -0.77
CDCA3-207ENST00000538862 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
CDCA3-207ENST00000538862 MRAPQ8TCY5 172 aa10.27□□□□□ -0.77
CDCA3-207ENST00000538862 CLEC2BQ92478 149 aa10.27□□□□□ -0.77
CDCA3-207ENST00000538862 MEIG1Q5JSS6 88 aa10.26□□□□□ -0.77
CDCA3-207ENST00000538862 RPL35AP18077 110 aaKnown RBP10.25□□□□□ -0.77
CDCA3-207ENST00000538862 SOSTDC1Q6X4U4 206 aa10.25□□□□□ -0.77
CDCA3-207ENST00000538862 PRKDCP78527 4128 aaKnown RBP10.24□□□□□ -0.77
CDCA3-207ENST00000538862 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 PF4P02776 101 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 GAGE2BQ13066 116 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 GAGE2EQ4V326 116 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 OXLD1Q5BKU9 147 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 TTC32Q5I0X7 151 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 DEFB121Q5J5C9 76 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 OR13C6PQ8NH95 151 aa10.24□□□□□ -0.77
CDCA3-207ENST00000538862 WFDC10AQ9H1F0 79 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms