RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SMIM1B2RUZ4 78 aa14.15□□□□□ -0.14
DDX55-205ENST00000538744 TMEM262E9PQX1 116 aa14.15□□□□□ -0.14
DDX55-205ENST00000538744 C11orf68Q9H3H3 251 aaKnown RBP14.15□□□□□ -0.14
DDX55-205ENST00000538744 SH2D6Q7Z4S9 175 aa14.15□□□□□ -0.14
DDX55-205ENST00000538744 ICOSQ9Y6W8 199 aa14.15□□□□□ -0.14
DDX55-205ENST00000538744 RBX1P62877 108 aa14.14□□□□□ -0.15
DDX55-205ENST00000538744 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
DDX55-205ENST00000538744 NDUFA1O15239 70 aa14.13□□□□□ -0.15
DDX55-205ENST00000538744 NAA38Q9BRA0 125 aaKnown RBP14.13□□□□□ -0.15
DDX55-205ENST00000538744 PKD1L1Q8TDX9 2849 aa14.13□□□□□ -0.15
DDX55-205ENST00000538744 CCL25O15444 150 aa14.12□□□□□ -0.15
DDX55-205ENST00000538744 A0A1W2PPM0 123 aa14.11□□□□□ -0.15
DDX55-205ENST00000538744 LITAFQ99732 161 aa14.1□□□□□ -0.15
DDX55-205ENST00000538744 COL6A5A8TX70 2615 aa14.1□□□□□ -0.15
DDX55-205ENST00000538744 LINC00959A0A1B0GUT2 108 aa14.1□□□□□ -0.15
DDX55-205ENST00000538744 CMYA5Q8N3K9 4069 aa14.09□□□□□ -0.15
DDX55-205ENST00000538744 IGLL5B9A064 214 aa14.09□□□□□ -0.15
DDX55-205ENST00000538744 TIMM17BO60830 172 aa14.08□□□□□ -0.16
DDX55-205ENST00000538744 SPANXDQ9BXN6 97 aa14.08□□□□□ -0.16
DDX55-205ENST00000538744 SPANXCQ9NY87 97 aa14.08□□□□□ -0.16
DDX55-205ENST00000538744 IGHV3OR16-9A0A0B4J2B5 98 aa14.07□□□□□ -0.16
DDX55-205ENST00000538744 FABP2P12104 132 aa14.07□□□□□ -0.16
DDX55-205ENST00000538744 RPL24P83731 157 aaKnown RBP14.07□□□□□ -0.16
DDX55-205ENST00000538744 GTF2H5Q6ZYL4 71 aa14.07□□□□□ -0.16
DDX55-205ENST00000538744 Q9H8V8 135 aa14.07□□□□□ -0.16
DDX55-205ENST00000538744 GAGE10A6NGK3 116 aa14.07□□□□□ -0.16
DDX55-205ENST00000538744 SS18Q15532 418 aa14.07□□□□□ -0.16
DDX55-205ENST00000538744 LELP1Q5T871 98 aa14.07□□□□□ -0.16
DDX55-205ENST00000538744 MUSTN1Q8IVN3 82 aa14.07□□□□□ -0.16
DDX55-205ENST00000538744 H3BNG1 76 aa14.06□□□□□ -0.16
DDX55-205ENST00000538744 APOMO95445 188 aa14.06□□□□□ -0.16
DDX55-205ENST00000538744 A0A0J9YWU9 116 aa14.05□□□□□ -0.16
DDX55-205ENST00000538744 K7EP34 96 aa14.05□□□□□ -0.16
DDX55-205ENST00000538744 MIAQ16674 131 aa14.05□□□□□ -0.16
DDX55-205ENST00000538744 A4D1N5 150 aa14.04□□□□□ -0.16
DDX55-205ENST00000538744 ADAMTSL4-AS1Q5T5F5 129 aa14.04□□□□□ -0.16
DDX55-205ENST00000538744 Q6ZTC4 211 aa14.04□□□□□ -0.16
DDX55-205ENST00000538744 A0A087WZ39 114 aa14.04□□□□□ -0.16
DDX55-205ENST00000538744 CIRBPQ14011 172 aaKnown RBP14.04□□□□□ -0.16
DDX55-205ENST00000538744 ZNF625Q96I27 306 aaPredicted RBP14.04□□□□□ -0.16
DDX55-205ENST00000538744 SPCS1Q9Y6A9 102 aa14.04□□□□□ -0.16
DDX55-205ENST00000538744 CFC1BP0CG36 223 aa14.03□□□□□ -0.16
DDX55-205ENST00000538744 CFC1P0CG37 223 aa14.03□□□□□ -0.16
DDX55-205ENST00000538744 COX7B2Q8TF08 81 aa14.03□□□□□ -0.16
DDX55-205ENST00000538744 PGPEP1Q9NXJ5 209 aa14.03□□□□□ -0.16
DDX55-205ENST00000538744 PRB2P02812 416 aaPredicted RBP14.02□□□□□ -0.16
DDX55-205ENST00000538744 PRSS2P07478 247 aa14.02□□□□□ -0.16
DDX55-205ENST00000538744 HERV-K104P63124 156 aa14.02□□□□□ -0.16
DDX55-205ENST00000538744 CLPSL2Q6UWE3 100 aa14.02□□□□□ -0.16
DDX55-205ENST00000538744 ANGP03950 147 aaKnown RBP14.01□□□□□ -0.17
DDX55-205ENST00000538744 LINC00269Q8N2A0 174 aa14.01□□□□□ -0.17
DDX55-205ENST00000538744 SPATA25Q9BR10 227 aa14.01□□□□□ -0.17
DDX55-205ENST00000538744 DNAH3Q8TD57 4116 aa14.01□□□□□ -0.17
DDX55-205ENST00000538744 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.01□□□□□ -0.17
DDX55-205ENST00000538744 K7EIL1 84 aa14.01□□□□□ -0.17
DDX55-205ENST00000538744 KPRPQ5T749 579 aaPredicted RBP14.01□□□□□ -0.17
DDX55-205ENST00000538744 C5orf38Q86SI9 138 aa14.01□□□□□ -0.17
DDX55-205ENST00000538744 IFITM1P13164 125 aa14□□□□□ -0.17
DDX55-205ENST00000538744 XCL1P47992 114 aa14□□□□□ -0.17
DDX55-205ENST00000538744 LYPD5Q6UWN5 251 aa14□□□□□ -0.17
DDX55-205ENST00000538744 C11orf45Q8TAV5 145 aa14□□□□□ -0.17
DDX55-205ENST00000538744 A0A0B4J2C4 111 aa13.99□□□□□ -0.17
DDX55-205ENST00000538744 Q8N3U1 123 aa13.99□□□□□ -0.17
DDX55-205ENST00000538744 PRO1854Q9UHT4 67 aa13.99□□□□□ -0.17
DDX55-205ENST00000538744 TSPAN13O95857 204 aa13.98□□□□□ -0.17
DDX55-205ENST00000538744 NANOS2P60321 138 aaKnown RBP13.98□□□□□ -0.17
DDX55-205ENST00000538744 REG3AQ06141 175 aa13.98□□□□□ -0.17
DDX55-205ENST00000538744 TOMM7Q9P0U1 55 aa13.98□□□□□ -0.17
DDX55-205ENST00000538744 LINC01561Q8N1V8 128 aa13.98□□□□□ -0.17
DDX55-205ENST00000538744 TM2D3Q9BRN9 247 aa13.98□□□□□ -0.17
DDX55-205ENST00000538744 MEIG1Q5JSS6 88 aa13.97□□□□□ -0.17
DDX55-205ENST00000538744 DEFB121Q5J5C9 76 aa13.96□□□□□ -0.17
DDX55-205ENST00000538744 DEFB131BA0A096LNP1 70 aa13.95□□□□□ -0.18
DDX55-205ENST00000538744 NPC2P61916 151 aa13.95□□□□□ -0.18
DDX55-205ENST00000538744 CD164L2Q6UWJ8 174 aa13.95□□□□□ -0.18
DDX55-205ENST00000538744 MDFIQ99750 246 aa13.95□□□□□ -0.18
DDX55-205ENST00000538744 DAND5Q8N907 189 aa13.95□□□□□ -0.18
DDX55-205ENST00000538744 CHCHD10Q8WYQ3 142 aaPredicted RBP13.95□□□□□ -0.18
DDX55-205ENST00000538744 EIF4EBP3O60516 100 aaPredicted RBP13.94□□□□□ -0.18
DDX55-205ENST00000538744 COPS9Q8WXC6 57 aa13.94□□□□□ -0.18
DDX55-205ENST00000538744 SFTA2Q6UW10 78 aa13.93□□□□□ -0.18
DDX55-205ENST00000538744 NOTCH1P46531 2555 aa13.93□□□□□ -0.18
DDX55-205ENST00000538744 ANK2Q01484 3957 aa13.93□□□□□ -0.18
DDX55-205ENST00000538744 MRAPQ8TCY5 172 aa13.93□□□□□ -0.18
DDX55-205ENST00000538744 LINC00308Q8TCZ7 52 aa13.93□□□□□ -0.18
DDX55-205ENST00000538744 TENM3Q9P273 2699 aa13.92□□□□□ -0.18
DDX55-205ENST00000538744 A0A0U1RRA0 63 aa13.92□□□□□ -0.18
DDX55-205ENST00000538744 COX7A2LO14548 114 aa13.92□□□□□ -0.18
DDX55-205ENST00000538744 IGHV3-33P01772 117 aa13.92□□□□□ -0.18
DDX55-205ENST00000538744 LYRM7Q5U5X0 104 aa13.92□□□□□ -0.18
DDX55-205ENST00000538744 IGLV10-54A0A075B6I4 117 aa13.91□□□□□ -0.18
DDX55-205ENST00000538744 ERG28Q9UKR5 140 aa13.91□□□□□ -0.18
DDX55-205ENST00000538744 Q8IZM0 81 aa13.9□□□□□ -0.18
DDX55-205ENST00000538744 PRR34Q9NV39 138 aa13.9□□□□□ -0.18
DDX55-205ENST00000538744 KLK12Q9UKR0 248 aa13.9□□□□□ -0.18
DDX55-205ENST00000538744 LOC107984156A0A0G2JMH3 177 aa13.9□□□□□ -0.18
DDX55-205ENST00000538744 C6orf226Q5I0X4 101 aa13.9□□□□□ -0.18
DDX55-205ENST00000538744 ARL17AQ8IVW1 177 aa13.9□□□□□ -0.18
DDX55-205ENST00000538744 PPDPFQ9H3Y8 114 aa13.88□□□□□ -0.19
DDX55-205ENST00000538744 TRAV10A0A0B4J240 114 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms