RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 NOTCH3Q9UM47 2321 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 TRBV25-1A0A075B6N4 114 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 TMSB15BA0A087X1C1 80 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 TRAV8-3A0A0A6YYJ7 113 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 TRBV7-7A0A0K0K1E9 115 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 CRPP02741 224 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 RBMY1A1P0DJD3 496 aaKnown RBP2.54□□□□□ -2
PTPN22-211ENST00000538253 RBMY1CP0DJD4 496 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 RBMY1FQ15415 496 aaKnown RBP2.54□□□□□ -2
PTPN22-211ENST00000538253 Q6ZRU5 148 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 NUP35Q8NFH5 326 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 UPK3BQ9BT76 320 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 IGHV1-24A0A0C4DH33 117 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 EPM2AB3EWF7 344 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 IGKCP01834 107 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 MGPP08493 103 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 GIG44P09565 113 aaPredicted RBP2.54□□□□□ -2
PTPN22-211ENST00000538253 FCER1GP30273 86 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 LINC00173Q6ZV60 143 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 C11orf72Q8NBR9 251 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 PGLYRP4Q96LB8 373 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 C8orf49Q96NF6 230 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 GYPEP15421 78 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 NANOS2P60321 138 aaKnown RBP2.54□□□□□ -2
PTPN22-211ENST00000538253 LAGE3Q14657 143 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 NXT2Q9NPJ8 142 aaKnown RBP2.54□□□□□ -2
PTPN22-211ENST00000538253 AP5S1Q9NUS5 200 aa2.54□□□□□ -2
PTPN22-211ENST00000538253 TRBV7-3A0A075B6L6 115 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 TRBV6-5A0A0K0K1A5 114 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 C8orf87E5RJ46 101 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 SS18Q15532 418 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 ORMDL2Q53FV1 153 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 Q6ZTC4 211 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 FP248Q71RG6 208 aaPredicted RBP2.53□□□□□ -2
PTPN22-211ENST00000538253 TMEM243Q9BU79 118 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 LCE6AA0A183 80 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 H3BT86 120 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 CKS2P33552 79 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 CASC10Q5T4H9 136 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 LYZL1Q6UWQ5 148 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 Q6ZTI0 123 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 ORMDL3Q8N138 153 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 SPANXDQ9BXN6 97 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 MGAM2Q2M2H8 2515 aa2.53□□□□□ -2
PTPN22-211ENST00000538253 TRAV8-4A0A0B4J246 113 aa2.53□□□□□ -2.01
PTPN22-211ENST00000538253 IGKV3D-20A0A0C4DH25 116 aa2.53□□□□□ -2.01
PTPN22-211ENST00000538253 SMIM27A0A1W2PRY6 76 aa2.53□□□□□ -2.01
PTPN22-211ENST00000538253 HIGD1CA8MV81 97 aa2.53□□□□□ -2.01
PTPN22-211ENST00000538253 I3L3M4 83 aa2.53□□□□□ -2.01
PTPN22-211ENST00000538253 GNRH2O43555 120 aa2.53□□□□□ -2.01
PTPN22-211ENST00000538253 FAM74A4Q5TZK3 123 aa2.53□□□□□ -2.01
PTPN22-211ENST00000538253 PRR15Q8IV56 129 aa2.53□□□□□ -2.01
PTPN22-211ENST00000538253 LRBAP50851 2863 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 ADGRG4Q8IZF6 3080 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 PLAC8L1A1L4L8 177 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 LEPROTL1O95214 131 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 SCGB1C2P0DMR2 95 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 RNASE3P12724 160 aaKnown RBP2.52□□□□□ -2.01
PTPN22-211ENST00000538253 PSMB2P49721 201 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 FHL2Q14192 279 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 LINC01545Q5VT33 79 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 HERVK_113P61574 105 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 TIMM21Q9BVV7 248 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 APLNQ9ULZ1 77 aa2.52□□□□□ -2.01
PTPN22-211ENST00000538253 TRBV20OR9-2A0A075B6H5 130 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 INAFM2P0DMQ5 153 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 NPC2P61916 151 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 FAM104BQ5XKR9 115 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 NTN5Q8WTR8 489 aaPredicted RBP2.51□□□□□ -2.01
PTPN22-211ENST00000538253 IMUPQ9GZP8 106 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 Q9H8V8 135 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 PSCAO43653 123 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 LY6G6CO95867 125 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 IGLV2-8P01709 118 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 MIAQ16674 131 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 LINC01556Q5JQF7 62 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 C1orf134Q5TEV5 83 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 LINC00476Q8WZB0 136 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 URB1-AS1Q96HZ7 61 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 SERP1Q9Y6X1 66 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 V9GYV3 84 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 ZNF80P51504 273 aaPredicted RBP2.51□□□□□ -2.01
PTPN22-211ENST00000538253 PRR9Q5T870 116 aa2.51□□□□□ -2.01
PTPN22-211ENST00000538253 C14orf178Q8N769 122 aaPredicted RBP2.51□□□□□ -2.01
PTPN22-211ENST00000538253 ANK3Q12955 4377 aaKnown RBP2.5□□□□□ -2.01
PTPN22-211ENST00000538253 SMKR1H3BMG3 65 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 DEFB1P60022 68 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 UBE2D3P61077 147 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 UBE2D2P62837 147 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 CHAC1Q9BUX1 264 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 IGHV3-38A0A0C4DH36 116 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 DEFB4AO15263 64 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 DNAH10OSP0CZ25 163 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 IFI27P40305 119 aaPredicted RBP2.5□□□□□ -2.01
PTPN22-211ENST00000538253 CRIP1P50238 77 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 SUMO2P61956 95 aaKnown RBP2.5□□□□□ -2.01
PTPN22-211ENST00000538253 CIRBPQ14011 172 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms