RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MAPKAPK5-AS1Q8N8E1 139 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 RNASE8Q8TDE3 154 aaKnown RBP3.85□□□□□ -1.79
LRP6-203ENST00000538239 C6orf223Q8N319 242 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 CELA1Q9UNI1 258 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 TP73-AS1Q9UF72 201 aa3.84□□□□□ -1.79
LRP6-203ENST00000538239 USP17L23D6RBM5 183 aa3.84□□□□□ -1.79
LRP6-203ENST00000538239 BPY2O14599 106 aa3.84□□□□□ -1.79
LRP6-203ENST00000538239 C9orf116Q5BN46 136 aaPredicted RBP3.84□□□□□ -1.79
LRP6-203ENST00000538239 CITED1Q99966 193 aa3.84□□□□□ -1.79
LRP6-203ENST00000538239 IGLV4-60A0A075B6I1 120 aa3.84□□□□□ -1.79
LRP6-203ENST00000538239 MRPS36P82909 103 aaKnown RBP3.84□□□□□ -1.79
LRP6-203ENST00000538239 COL27A1Q8IZC6 1860 aaPredicted RBP3.84□□□□□ -1.8
LRP6-203ENST00000538239 UTRNP46939 3433 aa3.84□□□□□ -1.8
LRP6-203ENST00000538239 C3orf84H3BNL1 204 aa3.84□□□□□ -1.8
LRP6-203ENST00000538239 C5orf47Q569G3 176 aa3.84□□□□□ -1.8
LRP6-203ENST00000538239 LYPD5Q6UWN5 251 aa3.84□□□□□ -1.8
LRP6-203ENST00000538239 UNQ6190/PRO20217Q6UXQ8 127 aa3.84□□□□□ -1.8
LRP6-203ENST00000538239 PTH2Q96A98 100 aa3.84□□□□□ -1.8
LRP6-203ENST00000538239 POLR2KP53803 58 aaKnown RBP3.83□□□□□ -1.8
LRP6-203ENST00000538239 Q8N2B8 174 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 ZNF580Q9UK33 172 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 Q6ZSN1 163 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 TAX1BP3O14907 124 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 LINC00694P0DN24 101 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 MDFIQ99750 246 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 UPK3BQ9BT76 320 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 COX6A2Q02221 97 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 LINC01556Q5JQF7 62 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 SPATA12Q7Z6I5 190 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 PCSK5Q92824 1860 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 TEN1Q86WV5 123 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 CIRBP-AS1Q8TBR5 109 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 Q8IZM0 81 aa3.83□□□□□ -1.8
LRP6-203ENST00000538239 C1orf137Q5JT78 98 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 PDE6GP18545 87 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 CASC2Q6XLA1 102 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 SBSPONQ8IVN8 264 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 H3BT86 120 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 SONP18583 2426 aaKnown RBP3.82□□□□□ -1.8
LRP6-203ENST00000538239 COX17Q14061 63 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 NAV2Q8IVL1 2488 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 TRIAP1O43715 76 aa3.82□□□□□ -1.8
LRP6-203ENST00000538239 RPL28P46779 137 aaKnown RBP3.82□□□□□ -1.8
LRP6-203ENST00000538239 FAM236AA0A1B0GUQ0 79 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 FAM236BA0A1B0GV22 79 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 CCKP06307 115 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 REG3GQ6UW15 175 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 SMIM11BQ8TCY0 68 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 NAV3Q8IVL0 2385 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 FSHBP01225 129 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 TRBV30A0A0K0K1B3 111 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 Q6ZQY7 126 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 ATRXP46100 2492 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 ZNF73O43830 326 aaPredicted RBP3.81□□□□□ -1.8
LRP6-203ENST00000538239 BEAN1Q3B7T3 259 aa3.81□□□□□ -1.8
LRP6-203ENST00000538239 LINC00242Q5T6M2 205 aa3.8□□□□□ -1.8
LRP6-203ENST00000538239 SEC61GP60059 68 aa3.8□□□□□ -1.8
LRP6-203ENST00000538239 C10orf25Q5T742 122 aa3.8□□□□□ -1.8
LRP6-203ENST00000538239 POM121L12Q8N7R1 296 aa3.8□□□□□ -1.8
LRP6-203ENST00000538239 CCDC168Q8NDH2 2452 aa3.8□□□□□ -1.8
LRP6-203ENST00000538239 TEX49A0A1B0GTD5 131 aa3.8□□□□□ -1.8
LRP6-203ENST00000538239 PRR3P79522 188 aaKnown RBP3.8□□□□□ -1.8
LRP6-203ENST00000538239 CACNA1AO00555 2505 aa3.8□□□□□ -1.8
LRP6-203ENST00000538239 PIEZO1Q92508 2521 aa3.8□□□□□ -1.8
LRP6-203ENST00000538239 EGFEM1PQ0D2K5 195 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 SDIM1Q6ZPB5 146 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 SORL1Q92673 2214 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 TIMM17BO60830 172 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 IGIPA6NJ69 53 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 SS18L2Q9UHA2 77 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 ATOX1O00244 68 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 CNFNQ9BYD5 112 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 ENHOQ6UWT2 76 aa3.79□□□□□ -1.8
LRP6-203ENST00000538239 TMEM258P61165 79 aa3.78□□□□□ -1.8
LRP6-203ENST00000538239 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
LRP6-203ENST00000538239 WFDC13Q8IUB5 93 aa3.78□□□□□ -1.8
LRP6-203ENST00000538239 TRBV10-3A0A0K0K1G6 114 aa3.78□□□□□ -1.8
LRP6-203ENST00000538239 AGRNO00468 2067 aa3.78□□□□□ -1.8
LRP6-203ENST00000538239 ESRGQ1W209 222 aa3.78□□□□□ -1.81
LRP6-203ENST00000538239 MRPL55Q7Z7F7 128 aaKnown RBP3.77□□□□□ -1.81
LRP6-203ENST00000538239 CENPFP49454 3210 aa3.77□□□□□ -1.81
LRP6-203ENST00000538239 RETNLBQ9BQ08 111 aa3.77□□□□□ -1.81
LRP6-203ENST00000538239 WDR87Q6ZQQ6 2873 aa3.77□□□□□ -1.81
LRP6-203ENST00000538239 Q6ZRU5 148 aa3.77□□□□□ -1.81
LRP6-203ENST00000538239 YPEL4Q96NS1 127 aa3.77□□□□□ -1.81
LRP6-203ENST00000538239 NDUFC2-KCTD14E9PQ53 114 aa3.77□□□□□ -1.81
LRP6-203ENST00000538239 ABCA2Q9BZC7 2435 aa3.76□□□□□ -1.81
LRP6-203ENST00000538239 MUC7Q8TAX7 377 aa3.76□□□□□ -1.81
LRP6-203ENST00000538239 XGP55808 180 aa3.76□□□□□ -1.81
LRP6-203ENST00000538239 NDUFV3P56181 108 aaKnown RBP3.76□□□□□ -1.81
LRP6-203ENST00000538239 C11orf72Q8NBR9 251 aa3.76□□□□□ -1.81
LRP6-203ENST00000538239 SMIM20Q8N5G0 67 aa3.76□□□□□ -1.81
LRP6-203ENST00000538239 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
LRP6-203ENST00000538239 B5MCH6 92 aa3.75□□□□□ -1.81
LRP6-203ENST00000538239 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.75□□□□□ -1.81
LRP6-203ENST00000538239 LINC00643Q86TS7 51 aa3.75□□□□□ -1.81
LRP6-203ENST00000538239 Q9BRP9 147 aa3.75□□□□□ -1.81
LRP6-203ENST00000538239 PRLHP81277 87 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms