RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 TMEM101Q96IK0 257 aa3.94□□□□□ -1.78
DDB1-210ENST00000538129 SMIM2Q9BVW6 85 aa3.94□□□□□ -1.78
DDB1-210ENST00000538129 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
DDB1-210ENST00000538129 PKHD1P08F94 4074 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 HECTD4Q9Y4D8 3996 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 KIAA1109Q2LD37 5005 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 IGLV4-60A0A075B6I1 120 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 IGKV2D-24A0A075B6R9 120 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.93□□□□□ -1.78
DDB1-210ENST00000538129 A0A087WTM6 91 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 IGKV2-29A2NJV5 120 aaPredicted RBP3.93□□□□□ -1.78
DDB1-210ENST00000538129 LRCOL1A6NCL2 159 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 RAB5AP20339 215 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 REG3AQ06141 175 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 RNASEKQ6P5S7 137 aaKnown RBP3.93□□□□□ -1.78
DDB1-210ENST00000538129 MRPL52Q86TS9 123 aaKnown RBP3.93□□□□□ -1.78
DDB1-210ENST00000538129 Q8N8P6 123 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 MAP1LC3AQ9H492 121 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 CSDC2Q9Y534 153 aaKnown RBP3.93□□□□□ -1.78
DDB1-210ENST00000538129 RYR1P21817 5038 aa3.93□□□□□ -1.78
DDB1-210ENST00000538129 TGIF2-C20orf24A0A0A6YYL0 155 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 LOC389332A0A1B0GUA5 103 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 G0S2P27469 103 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 FABP9Q0Z7S8 132 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 KIAA1644Q3SXP7 199 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 ZNF664Q8N3J9 261 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 OR5A1Q8NGJ0 315 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 TIMM21Q9BVV7 248 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 NXT2Q9NPJ8 142 aaKnown RBP3.92□□□□□ -1.78
DDB1-210ENST00000538129 SMCO4Q9NRQ5 59 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 CDC42SE2Q9NRR3 84 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
DDB1-210ENST00000538129 CCL25O15444 150 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 ORMDL2Q53FV1 153 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 KRTAP26-1Q6PEX3 210 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 ERASQ7Z444 233 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 SPATA12Q7Z6I5 190 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 BAALCQ8WXS3 180 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 YPEL4Q96NS1 127 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 UBE2D4Q9Y2X8 147 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 TRAPPC1Q9Y5R8 145 aa3.91□□□□□ -1.78
DDB1-210ENST00000538129 IGLV9-49A0A0B4J1Y8 123 aa3.9□□□□□ -1.79
DDB1-210ENST00000538129 LINC01546A6NGU7 62 aa3.9□□□□□ -1.79
DDB1-210ENST00000538129 IFI27P40305 119 aaPredicted RBP3.9□□□□□ -1.79
DDB1-210ENST00000538129 MRPS36P82909 103 aaKnown RBP3.9□□□□□ -1.79
DDB1-210ENST00000538129 C14orf177Q52M58 125 aa3.9□□□□□ -1.79
DDB1-210ENST00000538129 CLPSL2Q6UWE3 100 aa3.9□□□□□ -1.79
DDB1-210ENST00000538129 Q8N814 137 aa3.9□□□□□ -1.79
DDB1-210ENST00000538129 KRTAP9-8Q9BYQ0 159 aa3.9□□□□□ -1.79
DDB1-210ENST00000538129 SPANXA1Q9NS26 97 aa3.9□□□□□ -1.79
DDB1-210ENST00000538129 PYGO1Q9Y3Y4 419 aa3.9□□□□□ -1.79
DDB1-210ENST00000538129 IGLV10-54A0A075B6I4 117 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 IGLV5-45A0A087WSX0 123 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 LINC00959A0A1B0GUT2 108 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 LINC01549A6NIU2 74 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 C16orf90A8MZG2 172 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 C1orf196B1AJZ1 125 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 RPL39P62891 51 aaKnown RBP3.89□□□□□ -1.79
DDB1-210ENST00000538129 SS18Q15532 418 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
DDB1-210ENST00000538129 VCX2Q9H322 139 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 CYSLTR1Q9Y271 337 aa3.89□□□□□ -1.79
DDB1-210ENST00000538129 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
DDB1-210ENST00000538129 LECT2O14960 151 aa3.88□□□□□ -1.79
DDB1-210ENST00000538129 CDK2AP2O75956 126 aa3.88□□□□□ -1.79
DDB1-210ENST00000538129 WFDC2Q14508 124 aa3.88□□□□□ -1.79
DDB1-210ENST00000538129 C2orf66Q6UXQ4 117 aa3.88□□□□□ -1.79
DDB1-210ENST00000538129 CBLN2Q8IUK8 224 aa3.88□□□□□ -1.79
DDB1-210ENST00000538129 FAM104AQ969W3 186 aa3.88□□□□□ -1.79
DDB1-210ENST00000538129 DNAH8Q96JB1 4490 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 HERC2O95714 4834 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 APOBP04114 4563 aaKnown RBP3.87□□□□□ -1.79
DDB1-210ENST00000538129 IGIPA6NJ69 53 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 COLCA2A8K830 154 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 LINC00614P0C842 121 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 XCL1P47992 114 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 RAB5BP61020 215 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 SRSF9Q13242 221 aaKnown RBP eCLIP3.87□□□□□ -1.79
DDB1-210ENST00000538129 FA2HQ7L5A8 372 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 C18orf32Q8TCD1 76 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 TOMM6Q96B49 74 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 TMEM141Q96I45 108 aa3.87□□□□□ -1.79
DDB1-210ENST00000538129 OPRPNQ99935 248 aaPredicted RBP3.87□□□□□ -1.79
DDB1-210ENST00000538129 IGLV4-3A0A075B6K6 122 aa3.86□□□□□ -1.79
DDB1-210ENST00000538129 TRAV13-1A0A0B4J241 112 aa3.86□□□□□ -1.79
DDB1-210ENST00000538129 PRSS1P07477 247 aa3.86□□□□□ -1.79
DDB1-210ENST00000538129 RNASE13Q5GAN3 156 aaKnown RBP3.86□□□□□ -1.79
DDB1-210ENST00000538129 Q6ZN92 141 aa3.86□□□□□ -1.79
DDB1-210ENST00000538129 Q6ZUT4 128 aa3.86□□□□□ -1.79
DDB1-210ENST00000538129 SCGB3A1Q96QR1 104 aa3.86□□□□□ -1.79
DDB1-210ENST00000538129 AMELXQ99217 191 aa3.86□□□□□ -1.79
DDB1-210ENST00000538129 TIMM17AQ99595 171 aa3.86□□□□□ -1.79
DDB1-210ENST00000538129 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.85□□□□□ -1.79
DDB1-210ENST00000538129 GVQW2A0A096LPI5 108 aaPredicted RBP3.85□□□□□ -1.79
DDB1-210ENST00000538129 IGHV3OR16-9A0A0B4J2B5 98 aa3.85□□□□□ -1.79
DDB1-210ENST00000538129 IGHV1-58A0A0C4DH39 117 aa3.85□□□□□ -1.79
DDB1-210ENST00000538129 IFITM10A6NMD0 228 aa3.85□□□□□ -1.79
DDB1-210ENST00000538129 COX7A2LO14548 114 aa3.85□□□□□ -1.79
DDB1-210ENST00000538129 TRGC2P03986 189 aa3.85□□□□□ -1.79
DDB1-210ENST00000538129 S100A1P23297 94 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms