RNA–Protein interactions for RNA: ENST00000537750.5

SYNE1-236, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-236ENST00000537750 UTP20O75691 2785 aaKnown RBP10.6□□□□□ -0.71
SYNE1-236ENST00000537750 C5orf47Q569G3 176 aa10.6□□□□□ -0.71
SYNE1-236ENST00000537750 FAM19A3Q7Z5A8 133 aa10.6□□□□□ -0.71
SYNE1-236ENST00000537750 A8MTW9 85 aa10.6□□□□□ -0.71
SYNE1-236ENST00000537750 LECT2O14960 151 aa10.6□□□□□ -0.71
SYNE1-236ENST00000537750 LINC01561Q8N1V8 128 aa10.6□□□□□ -0.71
SYNE1-236ENST00000537750 UBE2E2Q96LR5 201 aa10.6□□□□□ -0.71
SYNE1-236ENST00000537750 LINC00158P58513 81 aa10.59□□□□□ -0.71
SYNE1-236ENST00000537750 CHD6Q8TD26 2715 aa10.59□□□□□ -0.71
SYNE1-236ENST00000537750 PF4P02776 101 aa10.59□□□□□ -0.71
SYNE1-236ENST00000537750 DSCR8Q96T75 97 aa10.58□□□□□ -0.72
SYNE1-236ENST00000537750 MAP6D1Q9H9H5 199 aa10.58□□□□□ -0.72
SYNE1-236ENST00000537750 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
SYNE1-236ENST00000537750 WNK1Q9H4A3 2382 aa10.58□□□□□ -0.72
SYNE1-236ENST00000537750 RPL36AP83881 106 aaKnown RBP10.58□□□□□ -0.72
SYNE1-236ENST00000537750 RPL36ALQ969Q0 106 aaKnown RBP10.58□□□□□ -0.72
SYNE1-236ENST00000537750 SPTBN4Q9H254 2564 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 CCL18P55774 89 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 SERP2Q8N6R1 65 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 DPH3Q96FX2 82 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 CCL19Q99731 98 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 POLQO75417 2590 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 NIPBLQ6KC79 2804 aaeCLIP10.57□□□□□ -0.72
SYNE1-236ENST00000537750 USP17L23D6RBM5 183 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 OXTP01178 125 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 INSP01308 110 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 Q6JHZ5 121 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 COX7B2Q8TF08 81 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 UPK3BQ9BT76 320 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 JMJD1CQ15652 2540 aa10.57□□□□□ -0.72
SYNE1-236ENST00000537750 CENPEQ02224 2701 aa10.56□□□□□ -0.72
SYNE1-236ENST00000537750 RPS28P62857 69 aaKnown RBP10.56□□□□□ -0.72
SYNE1-236ENST00000537750 Q6ZTI0 123 aa10.56□□□□□ -0.72
SYNE1-236ENST00000537750 FLNCQ14315 2725 aa10.56□□□□□ -0.72
SYNE1-236ENST00000537750 PFN2P35080 140 aa10.56□□□□□ -0.72
SYNE1-236ENST00000537750 UCNP55089 124 aa10.56□□□□□ -0.72
SYNE1-236ENST00000537750 OR13C6PQ8NH95 151 aa10.55□□□□□ -0.72
SYNE1-236ENST00000537750 FBN2P35556 2912 aa10.55□□□□□ -0.72
SYNE1-236ENST00000537750 K7EQD1 137 aa10.55□□□□□ -0.72
SYNE1-236ENST00000537750 OBSCN-AS1Q96MR7 158 aa10.55□□□□□ -0.72
SYNE1-236ENST00000537750 WFDC9Q8NEX5 89 aa10.55□□□□□ -0.72
SYNE1-236ENST00000537750 UBE2L6O14933 153 aa10.54□□□□□ -0.72
SYNE1-236ENST00000537750 HILS1P60008 231 aa10.54□□□□□ -0.72
SYNE1-236ENST00000537750 AKAP9Q99996 3911 aa10.54□□□□□ -0.72
SYNE1-236ENST00000537750 OVOL2Q9BRP0 275 aa10.54□□□□□ -0.72
SYNE1-236ENST00000537750 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
SYNE1-236ENST00000537750 H0YGX0 51 aa10.53□□□□□ -0.72
SYNE1-236ENST00000537750 PAX4O43316 350 aa10.53□□□□□ -0.72
SYNE1-236ENST00000537750 C1orf158Q8N1D5 194 aa10.53□□□□□ -0.72
SYNE1-236ENST00000537750 MAPK1IP1LQ8NDC0 245 aa10.53□□□□□ -0.72
SYNE1-236ENST00000537750 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.72
SYNE1-236ENST00000537750 B4DSR2 109 aa10.52□□□□□ -0.72
SYNE1-236ENST00000537750 TMEM258P61165 79 aa10.52□□□□□ -0.72
SYNE1-236ENST00000537750 TMEM243Q9BU79 118 aa10.52□□□□□ -0.73
SYNE1-236ENST00000537750 NBPF19A0A087WUL8 3843 aa10.51□□□□□ -0.73
SYNE1-236ENST00000537750 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
SYNE1-236ENST00000537750 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
SYNE1-236ENST00000537750 SS18Q15532 418 aa10.51□□□□□ -0.73
SYNE1-236ENST00000537750 KHDC1LQ5JSQ8 128 aa10.51□□□□□ -0.73
SYNE1-236ENST00000537750 DYNLRB2Q8TF09 96 aa10.51□□□□□ -0.73
SYNE1-236ENST00000537750 TRBV10-1A0A0K0K1A3 114 aa10.5□□□□□ -0.73
SYNE1-236ENST00000537750 GNLYP22749 145 aa10.5□□□□□ -0.73
SYNE1-236ENST00000537750 C4orf26Q17RF5 130 aa10.5□□□□□ -0.73
SYNE1-236ENST00000537750 SETD2Q9BYW2 2564 aaPredicted RBP10.49□□□□□ -0.73
SYNE1-236ENST00000537750 IGLV4-60A0A075B6I1 120 aa10.49□□□□□ -0.73
SYNE1-236ENST00000537750 FHL2Q14192 279 aa10.49□□□□□ -0.73
SYNE1-236ENST00000537750 NOP10Q9NPE3 64 aaKnown RBP10.48□□□□□ -0.73
SYNE1-236ENST00000537750 EPG5Q9HCE0 2579 aa10.48□□□□□ -0.73
SYNE1-236ENST00000537750 TRAV23DV6A0A075B6W5 121 aa10.48□□□□□ -0.73
SYNE1-236ENST00000537750 DEFB114Q30KQ6 69 aa10.48□□□□□ -0.73
SYNE1-236ENST00000537750 ODF3L2Q3SX64 289 aa10.48□□□□□ -0.73
SYNE1-236ENST00000537750 IL17DQ8TAD2 202 aa10.48□□□□□ -0.73
SYNE1-236ENST00000537750 ORMDL1Q9P0S3 153 aa10.48□□□□□ -0.73
SYNE1-236ENST00000537750 CFAP46Q8IYW2 2715 aa10.47□□□□□ -0.73
SYNE1-236ENST00000537750 FAM19A1Q7Z5A9 133 aa10.47□□□□□ -0.73
SYNE1-236ENST00000537750 CCKP06307 115 aa10.47□□□□□ -0.73
SYNE1-236ENST00000537750 IGHV3OR16-9A0A0B4J2B5 98 aa10.46□□□□□ -0.73
SYNE1-236ENST00000537750 PRR3P79522 188 aaKnown RBP10.46□□□□□ -0.73
SYNE1-236ENST00000537750 STHQ8IWL8 128 aa10.46□□□□□ -0.73
SYNE1-236ENST00000537750 SETXQ7Z333 2677 aaKnown RBP10.46□□□□□ -0.73
SYNE1-236ENST00000537750 TEX15Q9BXT5 2789 aa10.46□□□□□ -0.74
SYNE1-236ENST00000537750 NF1P21359 2839 aa10.46□□□□□ -0.74
SYNE1-236ENST00000537750 IBA57-AS1B1ANH7 110 aa10.45□□□□□ -0.74
SYNE1-236ENST00000537750 GHRHP01286 108 aa10.45□□□□□ -0.74
SYNE1-236ENST00000537750 PLA2G2AP14555 144 aa10.45□□□□□ -0.74
SYNE1-236ENST00000537750 TRBV6-4A0A1B0GX49 114 aa10.44□□□□□ -0.74
SYNE1-236ENST00000537750 HRCT1Q6UXD1 115 aa10.44□□□□□ -0.74
SYNE1-236ENST00000537750 ANKRD17O75179 2603 aaKnown RBP10.44□□□□□ -0.74
SYNE1-236ENST00000537750 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
SYNE1-236ENST00000537750 RNASE1P07998 156 aaKnown RBP10.43□□□□□ -0.74
SYNE1-236ENST00000537750 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
SYNE1-236ENST00000537750 Q5XG85 94 aa10.43□□□□□ -0.74
SYNE1-236ENST00000537750 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
SYNE1-236ENST00000537750 PTPN13Q12923 2485 aa10.42□□□□□ -0.74
SYNE1-236ENST00000537750 A0A087WZ39 114 aa10.41□□□□□ -0.74
SYNE1-236ENST00000537750 C20orf197Q8N268 126 aa10.41□□□□□ -0.74
SYNE1-236ENST00000537750 A0A096LNT2 108 aa10.4□□□□□ -0.74
SYNE1-236ENST00000537750 LY6G6DO95868 133 aa10.4□□□□□ -0.74
SYNE1-236ENST00000537750 LINC01356Q8N9X3 169 aa10.4□□□□□ -0.74
SYNE1-236ENST00000537750 NANOS2P60321 138 aaKnown RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms