RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RNASE3P12724 160 aaKnown RBP2.69□□□□□ -1.98
MCF2-210ENST00000536274 SAA4P35542 130 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 DSCR9P59020 149 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 HIST2H2BCQ6DN03 193 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 C11orf72Q8NBR9 251 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 ANK2Q01484 3957 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 LRRK2Q5S007 2527 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 IGHV1OR15-1A0A075B7D0 117 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 M0R2N4 97 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 NDUFC2O95298 119 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 MED14OSP0DP75 135 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 GYPEP15421 78 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 PSMB8P28062 276 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 POLR2KP53803 58 aaKnown RBP2.69□□□□□ -1.98
MCF2-210ENST00000536274 LINC00315P59091 139 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 PDE6HQ13956 83 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 PAPPA-AS1Q5QFB9 102 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 Q6JHZ5 121 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 COX8CQ7Z4L0 72 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 CCL17Q92583 94 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 FAM104AQ969W3 186 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 SPANXCQ9NY87 97 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 TRAV21A0A0B4J279 112 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 IGHV3-38A0A0C4DH36 116 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 LYNX1G3V0Z9 82 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 PSPHP1O15172 72 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 CTSGP08311 255 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 LYNX1P0DP58 116 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 CD28P10747 220 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 PVRIGQ6DKI7 326 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 C6orf223Q8N319 242 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 FAM110DQ8TAY7 271 aaPredicted RBP2.68□□□□□ -1.98
MCF2-210ENST00000536274 LINC00308Q8TCZ7 52 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 TEX15Q9BXT5 2789 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 FLNCQ14315 2725 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.68□□□□□ -1.98
MCF2-210ENST00000536274 IGKV2-29A2NJV5 120 aaPredicted RBP2.68□□□□□ -1.98
MCF2-210ENST00000536274 NDUFC2-KCTD14E9PQ53 114 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 LECT2O14960 151 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 COX6A2Q02221 97 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 Q9H8V8 135 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 CDKN2A-AS1Q9UH64 79 aa2.68□□□□□ -1.98
MCF2-210ENST00000536274 IGHV1-3A0A0C4DH29 117 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 IGHV1-46P01743 117 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 HTN1P15515 57 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 NANOS2P60321 138 aaKnown RBP2.67□□□□□ -1.98
MCF2-210ENST00000536274 DAD1P61803 113 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 MIR7-3HGQ8N6C7 128 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 TMEM141Q96I45 108 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 TM2D3Q9BRN9 247 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 SPANXDQ9BXN6 97 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 VCYO14598 125 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 VSIG2Q96IQ7 327 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 TIMM17AQ99595 171 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 KIF25-AS1Q9Y6Z4 181 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.67□□□□□ -1.98
MCF2-210ENST00000536274 FBN3Q75N90 2809 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 IGHV4-4A0A075B6R2 117 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 IGHV1-58A0A0C4DH39 117 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 KRTAP4-8A0A0G2JLE6 195 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 C15orf32Q32M92 178 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 C6orf226Q5I0X4 101 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 FAM222AQ5U5X8 452 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 CLEC19AQ6UXS0 136 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 C11orf44Q8N8P7 122 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 FAM215AQ9Y5M1 114 aa2.67□□□□□ -1.98
MCF2-210ENST00000536274 NOTCH3Q9UM47 2321 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 IGHV1-69DA0A0B4J2H0 117 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 LINC00337Q8N6G1 96 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 ZFAND2AQ8N6M9 145 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 C9orf106Q8NAJ2 232 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 C11orf68Q9H3H3 251 aaKnown RBP2.66□□□□□ -1.98
MCF2-210ENST00000536274 FAM30AQ9NZY2 134 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 ABCA2Q9BZC7 2435 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 IGHV1-8P0DP01 117 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 KRTAP10-9P60411 292 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 HAMPP81172 84 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 C20orf203Q8NBC4 194 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 APCP25054 2843 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 RPL36AP83881 106 aaKnown RBP2.66□□□□□ -1.98
MCF2-210ENST00000536274 PRR4Q16378 134 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 ECSCRQ19T08 205 aa2.66□□□□□ -1.98
MCF2-210ENST00000536274 RPL36ALQ969Q0 106 aaKnown RBP2.66□□□□□ -1.98
MCF2-210ENST00000536274 A0A0J9YX75 114 aa2.65□□□□□ -1.98
MCF2-210ENST00000536274 HIST2H2BDQ6DRA6 164 aa2.65□□□□□ -1.98
MCF2-210ENST00000536274 Q8N9L7 120 aa2.65□□□□□ -1.98
MCF2-210ENST00000536274 LINC01356Q8N9X3 169 aa2.65□□□□□ -1.98
MCF2-210ENST00000536274 SMIM11BQ8TCY0 68 aa2.65□□□□□ -1.98
MCF2-210ENST00000536274 IGLV11-55A0A075B6I3 123 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 KRTAP1-1Q07627 177 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 IGLV3-9A0A075B6K5 115 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 G3V318 75 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 M0QY20 66 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 SOCS3O14543 225 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 PRR3P79522 188 aaKnown RBP2.65□□□□□ -1.99
MCF2-210ENST00000536274 MRPL53Q96EL3 112 aaKnown RBP2.65□□□□□ -1.99
MCF2-210ENST00000536274 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 KRTAP9-4Q9BYQ2 154 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 LINC00574Q9H8X3 128 aa2.65□□□□□ -1.99
MCF2-210ENST00000536274 RBM12B-AS1Q9P1G2 102 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms