RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 K7EQD1 137 aa11.46□□□□□ -0.58
MCF2L-232ENST00000535094 GCN1Q92616 2671 aaKnown RBP11.45□□□□□ -0.58
MCF2L-232ENST00000535094 INAFM2P0DMQ5 153 aa11.45□□□□□ -0.58
MCF2L-232ENST00000535094 XCL1P47992 114 aa11.45□□□□□ -0.58
MCF2L-232ENST00000535094 TIRAPP58753 221 aa11.45□□□□□ -0.58
MCF2L-232ENST00000535094 DNAJC30Q96LL9 226 aa11.45□□□□□ -0.58
MCF2L-232ENST00000535094 TMEM89A2RUT3 159 aa11.45□□□□□ -0.58
MCF2L-232ENST00000535094 SMIM1B2RUZ4 78 aa11.45□□□□□ -0.58
MCF2L-232ENST00000535094 WFDC10AQ9H1F0 79 aa11.45□□□□□ -0.58
MCF2L-232ENST00000535094 KLK5Q9Y337 293 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-232ENST00000535094 SHISA2Q6UWI4 295 aa11.44□□□□□ -0.58
MCF2L-232ENST00000535094 TRAV13-2A0A0B4J235 113 aa11.44□□□□□ -0.58
MCF2L-232ENST00000535094 PLA2G2AP14555 144 aa11.44□□□□□ -0.58
MCF2L-232ENST00000535094 FLNAP21333 2647 aaKnown RBP11.43□□□□□ -0.58
MCF2L-232ENST00000535094 LINC00643Q86TS7 51 aa11.43□□□□□ -0.58
MCF2L-232ENST00000535094 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
MCF2L-232ENST00000535094 MXRA5Q9NR99 2828 aa11.43□□□□□ -0.58
MCF2L-232ENST00000535094 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
MCF2L-232ENST00000535094 MALP21145 153 aa11.42□□□□□ -0.58
MCF2L-232ENST00000535094 Q6Q795 121 aa11.42□□□□□ -0.58
MCF2L-232ENST00000535094 Q96MF0 132 aa11.42□□□□□ -0.58
MCF2L-232ENST00000535094 ACYP1P07311 99 aa11.42□□□□□ -0.58
MCF2L-232ENST00000535094 DEFB114Q30KQ6 69 aa11.42□□□□□ -0.58
MCF2L-232ENST00000535094 HIST2H2BCQ6DN03 193 aa11.42□□□□□ -0.58
MCF2L-232ENST00000535094 FAM218AQ96MZ4 157 aa11.42□□□□□ -0.58
MCF2L-232ENST00000535094 NCR3O14931 201 aa11.41□□□□□ -0.58
MCF2L-232ENST00000535094 DSCR9P59020 149 aa11.41□□□□□ -0.58
MCF2L-232ENST00000535094 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
MCF2L-232ENST00000535094 BRI3O95415 125 aa11.41□□□□□ -0.58
MCF2L-232ENST00000535094 M0QXV9 152 aa11.4□□□□□ -0.58
MCF2L-232ENST00000535094 TIMM17BO60830 172 aa11.4□□□□□ -0.58
MCF2L-232ENST00000535094 A0A1B0GX51 115 aa11.4□□□□□ -0.59
MCF2L-232ENST00000535094 SVIPQ8NHG7 77 aa11.39□□□□□ -0.59
MCF2L-232ENST00000535094 ESM1Q9NQ30 184 aa11.39□□□□□ -0.59
MCF2L-232ENST00000535094 IGLV10-54A0A075B6I4 117 aa11.39□□□□□ -0.59
MCF2L-232ENST00000535094 HTN3P15516 51 aa11.39□□□□□ -0.59
MCF2L-232ENST00000535094 CSMD2Q7Z408 3487 aa11.38□□□□□ -0.59
MCF2L-232ENST00000535094 A0A087WVE0 104 aa11.38□□□□□ -0.59
MCF2L-232ENST00000535094 hADV29S1A0JD25 119 aa11.38□□□□□ -0.59
MCF2L-232ENST00000535094 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
MCF2L-232ENST00000535094 CDC42SE2Q9NRR3 84 aa11.38□□□□□ -0.59
MCF2L-232ENST00000535094 IGSF10Q6WRI0 2623 aa11.37□□□□□ -0.59
MCF2L-232ENST00000535094 ODF3L2Q3SX64 289 aa11.37□□□□□ -0.59
MCF2L-232ENST00000535094 C11orf72Q8NBR9 251 aa11.37□□□□□ -0.59
MCF2L-232ENST00000535094 SMIM11BQ8TCY0 68 aa11.37□□□□□ -0.59
MCF2L-232ENST00000535094 SMCR5Q8TEV8 140 aa11.37□□□□□ -0.59
MCF2L-232ENST00000535094 A0A087WYN8 130 aa11.37□□□□□ -0.59
MCF2L-232ENST00000535094 TMEM86BQ8N661 226 aa11.37□□□□□ -0.59
MCF2L-232ENST00000535094 FAM240AA0A1B0GVK7 77 aa11.37□□□□□ -0.59
MCF2L-232ENST00000535094 CCL24O00175 119 aa11.36□□□□□ -0.59
MCF2L-232ENST00000535094 C1orf158Q8N1D5 194 aa11.36□□□□□ -0.59
MCF2L-232ENST00000535094 VPS13CQ709C8 3753 aa11.36□□□□□ -0.59
MCF2L-232ENST00000535094 TRACP01848 142 aa11.36□□□□□ -0.59
MCF2L-232ENST00000535094 LINC00337Q8N6G1 96 aa11.36□□□□□ -0.59
MCF2L-232ENST00000535094 Q6YL49 198 aa11.35□□□□□ -0.59
MCF2L-232ENST00000535094 LOC107984640A0A0U1RRK4 108 aa11.35□□□□□ -0.59
MCF2L-232ENST00000535094 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
MCF2L-232ENST00000535094 ITPR3Q14573 2671 aa11.34□□□□□ -0.59
MCF2L-232ENST00000535094 IGLV4-60A0A075B6I1 120 aa11.34□□□□□ -0.59
MCF2L-232ENST00000535094 PRR3P79522 188 aaKnown RBP11.34□□□□□ -0.59
MCF2L-232ENST00000535094 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.59
MCF2L-232ENST00000535094 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
MCF2L-232ENST00000535094 CCL18P55774 89 aa11.33□□□□□ -0.6
MCF2L-232ENST00000535094 WFDC9Q8NEX5 89 aa11.33□□□□□ -0.6
MCF2L-232ENST00000535094 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
MCF2L-232ENST00000535094 J3QLI3 93 aa11.32□□□□□ -0.6
MCF2L-232ENST00000535094 KRTAP10-9P60411 292 aa11.32□□□□□ -0.6
MCF2L-232ENST00000535094 TMEM126AQ9H061 195 aa11.32□□□□□ -0.6
MCF2L-232ENST00000535094 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
MCF2L-232ENST00000535094 TRBV10-1A0A0K0K1A3 114 aa11.31□□□□□ -0.6
MCF2L-232ENST00000535094 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
MCF2L-232ENST00000535094 RNF152Q8N8N0 203 aa11.31□□□□□ -0.6
MCF2L-232ENST00000535094 UQCRQO14949 82 aa11.31□□□□□ -0.6
MCF2L-232ENST00000535094 DEFB4AO15263 64 aa11.31□□□□□ -0.6
MCF2L-232ENST00000535094 C4orf3Q8WVX3 66 aa11.31□□□□□ -0.6
MCF2L-232ENST00000535094 PRORYQ9H606 182 aa11.31□□□□□ -0.6
MCF2L-232ENST00000535094 LAMTOR3Q9UHA4 124 aa11.3□□□□□ -0.6
MCF2L-232ENST00000535094 TRBV7-7A0A0K0K1E9 115 aa11.3□□□□□ -0.6
MCF2L-232ENST00000535094 PF4P02776 101 aa11.3□□□□□ -0.6
MCF2L-232ENST00000535094 IGHV4-31P0DP07 118 aa11.29□□□□□ -0.6
MCF2L-232ENST00000535094 FASNP49327 2511 aaKnown RBP11.29□□□□□ -0.6
MCF2L-232ENST00000535094 BEAN1Q3B7T3 259 aa11.29□□□□□ -0.6
MCF2L-232ENST00000535094 ORMDL1Q9P0S3 153 aa11.29□□□□□ -0.6
MCF2L-232ENST00000535094 GYPEP15421 78 aa11.29□□□□□ -0.6
MCF2L-232ENST00000535094 SS18Q15532 418 aa11.29□□□□□ -0.6
MCF2L-232ENST00000535094 OVOL2Q9BRP0 275 aa11.29□□□□□ -0.6
MCF2L-232ENST00000535094 TRAV23DV6A0A075B6W5 121 aa11.28□□□□□ -0.6
MCF2L-232ENST00000535094 H0YGX0 51 aa11.28□□□□□ -0.6
MCF2L-232ENST00000535094 ATOX1O00244 68 aa11.27□□□□□ -0.6
MCF2L-232ENST00000535094 IGLV5-45A0A087WSX0 123 aa11.27□□□□□ -0.61
MCF2L-232ENST00000535094 C9orf129Q5T035 196 aaKnown RBP11.27□□□□□ -0.61
MCF2L-232ENST00000535094 WFDC11Q8NEX6 87 aa11.27□□□□□ -0.61
MCF2L-232ENST00000535094 LINC00526Q96FQ7 95 aa11.27□□□□□ -0.61
MCF2L-232ENST00000535094 LINC00846Q9NV44 126 aa11.27□□□□□ -0.61
MCF2L-232ENST00000535094 CXCL5P42830 114 aa11.26□□□□□ -0.61
MCF2L-232ENST00000535094 HAMPP81172 84 aa11.26□□□□□ -0.61
MCF2L-232ENST00000535094 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
MCF2L-232ENST00000535094 IMUPQ9GZP8 106 aa11.26□□□□□ -0.61
MCF2L-232ENST00000535094 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
MCF2L-232ENST00000535094 TRBV6-8A0A0A6YYG3 113 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms