RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 IGLV2-18A0A075B6J9 118 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 IGHV3-73A0A0B4J1V6 119 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 FAM240AA0A1B0GVK7 77 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 LST1O00453 97 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 C20orf173Q96LM9 149 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 LEPROTO15243 131 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 BUB3O43684 328 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 DEFB136Q30KP8 78 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 CYSRT1A8MQ03 144 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 PPP1R17O96001 155 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 U3KQE9 123 aa6.66□□□□□ -1.34
SF3B2-216ENST00000534765 GNRH2O43555 120 aa6.65□□□□□ -1.34
SF3B2-216ENST00000534765 DSCR9P59020 149 aa6.65□□□□□ -1.34
SF3B2-216ENST00000534765 IGKV3OR2-268A0A0C4DH90 116 aa6.65□□□□□ -1.34
SF3B2-216ENST00000534765 PSMB8P28062 276 aa6.65□□□□□ -1.34
SF3B2-216ENST00000534765 HILS1P60008 231 aa6.65□□□□□ -1.34
SF3B2-216ENST00000534765 ZNF876PQ49A33 203 aa6.65□□□□□ -1.34
SF3B2-216ENST00000534765 VCYO14598 125 aa6.65□□□□□ -1.35
SF3B2-216ENST00000534765 PDE6HQ13956 83 aa6.65□□□□□ -1.35
SF3B2-216ENST00000534765 IGHV3-30-3P0DP02 117 aa6.64□□□□□ -1.35
SF3B2-216ENST00000534765 FAM223BA6NKX1 122 aa6.64□□□□□ -1.35
SF3B2-216ENST00000534765 NDUFC2O95298 119 aa6.64□□□□□ -1.35
SF3B2-216ENST00000534765 Q5XG85 94 aa6.64□□□□□ -1.35
SF3B2-216ENST00000534765 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
SF3B2-216ENST00000534765 IGLV4-69A0A075B6H9 119 aa6.63□□□□□ -1.35
SF3B2-216ENST00000534765 TIMM17BO60830 172 aa6.63□□□□□ -1.35
SF3B2-216ENST00000534765 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
SF3B2-216ENST00000534765 FHL2Q14192 279 aa6.63□□□□□ -1.35
SF3B2-216ENST00000534765 PRIMA1Q86XR5 153 aa6.63□□□□□ -1.35
SF3B2-216ENST00000534765 TOMM7Q9P0U1 55 aa6.63□□□□□ -1.35
SF3B2-216ENST00000534765 NBEAL2Q6ZNJ1 2754 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 TRBV6-1A0A0K0K1D8 114 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 F6UB75 175 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
SF3B2-216ENST00000534765 SS18Q15532 418 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 PRR9Q5T870 116 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 HAMPP81172 84 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 C9orf139Q6ZV77 190 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 SOCS3O14543 225 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 CRYGDP07320 174 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 TMEM141Q96I45 108 aa6.62□□□□□ -1.35
SF3B2-216ENST00000534765 TMEM86BQ8N661 226 aa6.61□□□□□ -1.35
SF3B2-216ENST00000534765 C9orf85Q96MD7 179 aa6.61□□□□□ -1.35
SF3B2-216ENST00000534765 ENHOQ6UWT2 76 aa6.61□□□□□ -1.35
SF3B2-216ENST00000534765 SPATA3Q8NHX4 192 aa6.6□□□□□ -1.35
SF3B2-216ENST00000534765 LINC00474Q9P2X8 69 aa6.6□□□□□ -1.35
SF3B2-216ENST00000534765 IGHV4OR15-8A0A075B7B6 117 aa6.6□□□□□ -1.35
SF3B2-216ENST00000534765 A0A087WW49 117 aa6.6□□□□□ -1.35
SF3B2-216ENST00000534765 TRAV12-2A0A075B6T6 113 aa6.6□□□□□ -1.35
SF3B2-216ENST00000534765 DNAJC9-AS1A6NH13 148 aa6.6□□□□□ -1.35
SF3B2-216ENST00000534765 NCR3O14931 201 aa6.6□□□□□ -1.35
SF3B2-216ENST00000534765 SLPIP03973 132 aa6.6□□□□□ -1.35
SF3B2-216ENST00000534765 LRCOL1A6NCL2 159 aa6.59□□□□□ -1.35
SF3B2-216ENST00000534765 CXCL5P42830 114 aa6.59□□□□□ -1.35
SF3B2-216ENST00000534765 IGHV1OR15-1A0A075B7D0 117 aa6.59□□□□□ -1.35
SF3B2-216ENST00000534765 CRPP02741 224 aa6.59□□□□□ -1.35
SF3B2-216ENST00000534765 SUMO4Q6EEV6 95 aa6.59□□□□□ -1.35
SF3B2-216ENST00000534765 TMEM61Q8N0U2 210 aa6.59□□□□□ -1.35
SF3B2-216ENST00000534765 C11orf68Q9H3H3 251 aaKnown RBP6.59□□□□□ -1.35
SF3B2-216ENST00000534765 TSHBP01222 138 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 SLURP1P55000 103 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 MIAQ16674 131 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 Q9H8V8 135 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 IGHV7-4-1A0A0J9YVY3 117 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 F8WEM9 126 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 COX7A2LO14548 114 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 KRTAP10-3P60369 221 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 FAM19A1Q7Z5A9 133 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 LINC00846Q9NV44 126 aa6.58□□□□□ -1.36
SF3B2-216ENST00000534765 NDUFC2-KCTD14E9PQ53 114 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 XCL1P47992 114 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 DAD1P61803 113 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 XCL2Q9UBD3 114 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 SERP1Q9Y6X1 66 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 MAST4O15021 2626 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 BAHCC1Q9P281 2608 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 MUC4Q99102 2169 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 IGHV3-38A0A0C4DH36 116 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 COPS9Q8WXC6 57 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 RMI2Q96E14 147 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 LECT2O14960 151 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 PRM2P04554 102 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 SNRPD3P62318 126 aaKnown RBP6.57□□□□□ -1.36
SF3B2-216ENST00000534765 TMEM190Q8WZ59 177 aa6.57□□□□□ -1.36
SF3B2-216ENST00000534765 F8P00451 2351 aa6.56□□□□□ -1.36
SF3B2-216ENST00000534765 LINC00482Q8N8I6 264 aa6.56□□□□□ -1.36
SF3B2-216ENST00000534765 Q8N2B8 174 aa6.56□□□□□ -1.36
SF3B2-216ENST00000534765 TIMM17AQ99595 171 aa6.56□□□□□ -1.36
SF3B2-216ENST00000534765 RHPN1-AS1Q9BWJ2 59 aa6.56□□□□□ -1.36
SF3B2-216ENST00000534765 CNFNQ9BYD5 112 aa6.56□□□□□ -1.36
SF3B2-216ENST00000534765 DNAH3Q8TD57 4116 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 IGIPA6NJ69 53 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 LY6G6DO95868 133 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 DCANP1Q8TF63 244 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.55□□□□□ -1.36
SF3B2-216ENST00000534765 IGKV2-29A2NJV5 120 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms