RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 SPCS3P61009 180 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 PACRGLQ8N7B6 248 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 ASB13Q8WXK3 278 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 MED28Q9H204 178 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 IGSF23A1L1A6 192 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 EFCAB10A6NFE3 127 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 FAM24AA6NFZ4 105 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 GPR31O00270 319 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 CDS2O95674 445 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 IGKV4-1P06312 121 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 LINC00614P0C842 121 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 S100GP29377 79 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 NMSQ5H8A3 153 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 OR10D4PQ8NGN7 298 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 OR13C8Q8NGS7 320 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 RAB2BQ8WUD1 216 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 SPANXB1Q9NS25 103 aaPredicted RBP2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 PXMP4Q9Y6I8 212 aa2.04□□□□□ -2.08
ECHDC1-223ENST00000534442 GVQW2A0A096LPI5 108 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 TRBV6-8A0A0A6YYG3 113 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 LOC107984640A0A0U1RRK4 108 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 IRGMA1A4Y4 181 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 IGKV1-5P01602 117 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 FGF6P10767 208 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 S100A5P33763 92 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 CDC34P49427 236 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 RAB5CP51148 216 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 AKR1C2P52895 323 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 GNG2P59768 71 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 VBP1P61758 197 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 MLLT11Q13015 90 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 SPAG11AQ6PDA7 123 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 ATP5L2Q7Z4Y8 100 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 S100A7AQ86SG5 101 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 OR2T35Q8NGX2 323 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 CARD19Q96LW7 228 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 PACRGQ96M98 296 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 MGLLQ99685 303 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 HIGD2AQ9BW72 106 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 MND1Q9BWT6 205 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 AGPAT4-IT1Q9H0P7 198 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 BATF3Q9NR55 127 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 RSL24D1Q9UHA3 163 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 NDUFA12Q9UI09 145 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 HIGD1AQ9Y241 93 aa2.03□□□□□ -2.08
ECHDC1-223ENST00000534442 IGKV2D-26A0A0A0MRZ7 120 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 CEBPZOSA8MTT3 80 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 HYPMO75409 117 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 NCS1P62166 190 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 HERVK_113P63121 156 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 FAM229BQ4G0N7 80 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 MCFD2Q8NI22 146 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 COMMD3Q9UBI1 195 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 U3KQ87 197 aa2.02□□□□□ -2.09
ECHDC1-223ENST00000534442 SMIM31A0A1B0GVY4 71 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 LINC00862A6NCI5 91 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 GNRH2O43555 120 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 OR5G3P0C626 314 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 PIGPP57054 158 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 SURF2Q15527 256 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 MRPL51Q4U2R6 128 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 TMEM78Q5T7P6 136 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 TRIQKQ629K1 86 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 BPIFA4PQ86YQ2 179 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 EIF5A2Q9GZV4 153 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 ATG5Q9H1Y0 275 aa2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-223ENST00000534442 RBAKDNA6NC62 111 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 PDCD5O14737 125 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 TYMSP04818 313 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 UCHL1P09936 223 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 HIST1H1EP10412 219 aaKnown RBP2□□□□□ -2.09
ECHDC1-223ENST00000534442 SDC2P34741 201 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 UBE2BP63146 152 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 Q6AWC8 147 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 LPCAT3Q6P1A2 487 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 SNX29P2Q8IUI4 249 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 DIRAS2Q96HU8 199 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 CACFD1Q9UGQ2 172 aa2□□□□□ -2.09
ECHDC1-223ENST00000534442 SDHAF1A6NFY7 115 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 A8MWV9 139 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 H3BQ15 152 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 M0R3E3 92 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 PFDN1O60925 122 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 IGLC2P0DOY2 106 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 BCL2P10415 239 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 RPL28P46779 137 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 UBE2D3P61077 147 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 UBE2D2P62837 147 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 FABP5Q01469 135 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 PPP1R1AQ13522 171 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 RNASE11Q8TAA1 199 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 AP3S1Q92572 193 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 PTH2Q96A98 100 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 C11orf1Q9H5F2 150 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 TXNL4BQ9NX01 149 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 PRELID1Q9Y255 219 aa1.99□□□□□ -2.09
ECHDC1-223ENST00000534442 TRBV7-3A0A075B6L6 115 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms