RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 OR10P1Q8NGE3 313 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 CMTM2Q8TAZ6 248 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 RAB2BQ8WUD1 216 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 ARL6Q9H0F7 186 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 HIGD1AQ9Y241 93 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 ZFP30Q9Y2G7 519 aa2.73□□□□□ -1.97
CASP4-213ENST00000534356 IGKV2-40A0A087WW87 121 aaPredicted RBP2.72□□□□□ -1.97
CASP4-213ENST00000534356 IGHV3-73A0A0B4J1V6 119 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 C9JQL5 133 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 GNRH2O43555 120 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 ATG12O94817 140 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 IFNA1P01562 189 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 IGKV2D-40P01614 121 aaPredicted RBP2.72□□□□□ -1.97
CASP4-213ENST00000534356 IGLC2P0DOY2 106 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 RPL7P18124 248 aaKnown RBP2.72□□□□□ -1.97
CASP4-213ENST00000534356 GABARAPL2P60520 117 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 CKS1BP61024 79 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 RANP62826 216 aaKnown RBP2.72□□□□□ -1.97
CASP4-213ENST00000534356 AKR1C1Q04828 323 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 SMAGPQ0VAQ4 97 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 KRTAP25-1Q3LHN0 102 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 FAM162BQ5T6X4 162 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 NIT1Q86X76 327 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 EXOC3-AS1Q8N2X6 119 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 ZFAND2AQ8N6M9 145 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 TMEM229BQ8NBD8 167 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 Q8TAT8 98 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 YPEL4Q96NS1 127 aa2.72□□□□□ -1.97
CASP4-213ENST00000534356 C14orf166Q9Y224 244 aaKnown RBP2.72□□□□□ -1.97
CASP4-213ENST00000534356 IGSF23A1L1A6 192 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 F6UZH7 168 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 HIST1H1EP10412 219 aaKnown RBP2.71□□□□□ -1.98
CASP4-213ENST00000534356 SULT1A1P50225 295 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 SULT1A2P50226 295 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 EIF5AP63241 154 aaKnown RBP2.71□□□□□ -1.98
CASP4-213ENST00000534356 TMEM128Q5BJH2 165 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 LINC01556Q5JQF7 62 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 TEX261Q6UWH6 196 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 DPPA3Q6W0C5 159 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 LINC00305Q7Z4B0 112 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 C9orf62Q8N4C0 152 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 OR13C6PQ8NH95 151 aa2.71□□□□□ -1.98
CASP4-213ENST00000534356 SYNGR2O43760 224 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 SLC25A5P05141 298 aaKnown RBP2.7□□□□□ -1.98
CASP4-213ENST00000534356 GPX1P07203 203 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 SCGB1C2P0DMR2 95 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 PYYP10082 97 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 FGF7P21781 194 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 MP68P56378 58 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 RHEBQ15382 184 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 OCIAD2Q56VL3 154 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 CENPWQ5EE01 88 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 COL5A1-AS1Q5SY13 56 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 AKR1C8PQ5T2L2 129 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 MIC13Q5XKP0 118 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 EIF5AL1Q6IS14 154 aaKnown RBP2.7□□□□□ -1.98
CASP4-213ENST00000534356 TCTE3Q8IZS6 198 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 SCGB1C1Q8TD33 95 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 HYLS1Q96M11 299 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 MGST2Q99735 147 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CASP4-213ENST00000534356 A0A087WXM4 84 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 BORCS7-ASMTA0A0B4J1R7 106 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 TMEM218A2RU14 115 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 CFDP00746 253 aaPredicted RBP2.69□□□□□ -1.98
CASP4-213ENST00000534356 TMBIM6P55061 237 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 SURF2Q15527 256 aaPredicted RBP2.69□□□□□ -1.98
CASP4-213ENST00000534356 TMEM97Q5BJF2 176 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 LCN15Q6UWW0 184 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 C10orf126Q8N4M7 172 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 SIGMAR1Q99720 223 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 NKX6-2Q9C056 277 aaPredicted RBP2.69□□□□□ -1.98
CASP4-213ENST00000534356 PSENENQ9NZ42 101 aa2.69□□□□□ -1.98
CASP4-213ENST00000534356 IGLV10-54A0A075B6I4 117 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 TRBV19A0A075B6N1 114 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 MUC21A0A0G2JKD1 596 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 C9JCJ5 164 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 SSSCA1O60232 199 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 PPP1R1AQ13522 171 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 IBA57Q5T440 356 aaKnown RBP2.68□□□□□ -1.98
CASP4-213ENST00000534356 C10orf113Q5VZT2 155 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 FAM19A5Q7Z5A7 132 aaPredicted RBP2.68□□□□□ -1.98
CASP4-213ENST00000534356 SVBPQ8N300 66 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 MCFD2Q8NI22 146 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 ODF3Q96PU9 254 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 SLC50A1Q9BRV3 221 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 TMEM126AQ9H061 195 aa2.68□□□□□ -1.98
CASP4-213ENST00000534356 LSM5Q9Y4Y9 91 aaKnown RBP2.68□□□□□ -1.98
CASP4-213ENST00000534356 TRAV4A0A0B4J268 109 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 J3QR89 54 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 K7EPK0 472 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 SFT2D2O95562 160 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 AKAIN1P0CW23 69 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 CXCL2P19875 107 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 CFAP126Q5VTH2 177 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 TMEM14EPQ6UXP3 125 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 SDIM1Q6ZPB5 146 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 Q6ZRU5 148 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 MIR17HGQ75NE6 70 aa2.67□□□□□ -1.98
CASP4-213ENST00000534356 BPIFA4PQ86YQ2 179 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms