RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 PRO1933Q9H354 126 aa8.38□□□□□ -1.07
CHRDL2-209ENST00000534276 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
CHRDL2-209ENST00000534276 TINCRA0A1B0GVN0 87 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 C11orf86A6NJI1 115 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 TTC32Q5I0X7 151 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 Q6ZUT4 128 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 OPRPNQ99935 248 aaPredicted RBP8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 MRPS16Q9Y3D3 137 aaKnown RBP8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 CCL25O15444 150 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 DLEU1O43261 78 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 COX8AP10176 69 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 DDTP30046 118 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 STPG4Q8N801 248 aa8.37□□□□□ -1.07
CHRDL2-209ENST00000534276 PCP4L1A6NKN8 68 aa8.36□□□□□ -1.07
CHRDL2-209ENST00000534276 UBE2D1P51668 147 aa8.36□□□□□ -1.07
CHRDL2-209ENST00000534276 HERVK_113P61574 105 aa8.36□□□□□ -1.07
CHRDL2-209ENST00000534276 ANKRD39Q53RE8 183 aa8.36□□□□□ -1.07
CHRDL2-209ENST00000534276 RYR1P21817 5038 aa8.35□□□□□ -1.07
CHRDL2-209ENST00000534276 E9PLD3 99 aa8.35□□□□□ -1.07
CHRDL2-209ENST00000534276 GAGE6Q13070 117 aa8.35□□□□□ -1.07
CHRDL2-209ENST00000534276 SLC25A34Q6PIV7 304 aa8.35□□□□□ -1.07
CHRDL2-209ENST00000534276 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
CHRDL2-209ENST00000534276 CHAC1Q9BUX1 264 aa8.35□□□□□ -1.07
CHRDL2-209ENST00000534276 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
CHRDL2-209ENST00000534276 IGLV5-45A0A087WSX0 123 aa8.34□□□□□ -1.07
CHRDL2-209ENST00000534276 A0A0J9YXV3 536 aa8.34□□□□□ -1.07
CHRDL2-209ENST00000534276 J3QL48 77 aa8.34□□□□□ -1.07
CHRDL2-209ENST00000534276 CDK2AP2O75956 126 aa8.34□□□□□ -1.07
CHRDL2-209ENST00000534276 HERVK_113P63121 156 aa8.34□□□□□ -1.07
CHRDL2-209ENST00000534276 TRAV8-6A0A0B4J262 113 aa8.33□□□□□ -1.08
CHRDL2-209ENST00000534276 SIVA1O15304 175 aa8.33□□□□□ -1.08
CHRDL2-209ENST00000534276 BOD1L2Q8IYS8 172 aa8.33□□□□□ -1.08
CHRDL2-209ENST00000534276 C14orf144Q96I85 54 aa8.33□□□□□ -1.08
CHRDL2-209ENST00000534276 TMEM262E9PQX1 116 aa8.32□□□□□ -1.08
CHRDL2-209ENST00000534276 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
CHRDL2-209ENST00000534276 RBX1P62877 108 aa8.32□□□□□ -1.08
CHRDL2-209ENST00000534276 TMEM170BQ5T4T1 132 aa8.32□□□□□ -1.08
CHRDL2-209ENST00000534276 GEMIN7Q9H840 131 aaKnown RBP8.32□□□□□ -1.08
CHRDL2-209ENST00000534276 IGLV4-60A0A075B6I1 120 aa8.31□□□□□ -1.08
CHRDL2-209ENST00000534276 TMEM223A0PJW6 202 aa8.31□□□□□ -1.08
CHRDL2-209ENST00000534276 H3BRM9 83 aa8.31□□□□□ -1.08
CHRDL2-209ENST00000534276 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
CHRDL2-209ENST00000534276 HSPG2P98160 4391 aa8.3□□□□□ -1.08
CHRDL2-209ENST00000534276 LRP1BQ9NZR2 4599 aa8.3□□□□□ -1.08
CHRDL2-209ENST00000534276 NMUP48645 174 aa8.3□□□□□ -1.08
CHRDL2-209ENST00000534276 MPV17L2Q567V2 206 aa8.3□□□□□ -1.08
CHRDL2-209ENST00000534276 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
CHRDL2-209ENST00000534276 ABCA13Q86UQ4 5058 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 HNRNPA3P51991 378 aaKnown RBP8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 KRTAP10-2P60368 255 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 PLEKHB2Q96CS7 222 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 LEPROTO15243 131 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 Q6ZRN7 208 aaPredicted RBP8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 MAPKAPK5-AS1Q8N8E1 139 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 HIGD1BQ9P298 99 aa8.29□□□□□ -1.08
CHRDL2-209ENST00000534276 IGHV1-58A0A0C4DH39 117 aa8.28□□□□□ -1.08
CHRDL2-209ENST00000534276 LINC00959A0A1B0GUT2 108 aa8.28□□□□□ -1.08
CHRDL2-209ENST00000534276 LINC00587B1AMM8 73 aa8.28□□□□□ -1.08
CHRDL2-209ENST00000534276 SS18Q15532 418 aa8.28□□□□□ -1.08
CHRDL2-209ENST00000534276 LINC00469Q8N7U9 141 aa8.28□□□□□ -1.08
CHRDL2-209ENST00000534276 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
CHRDL2-209ENST00000534276 PCP2Q8IVA1 136 aa8.27□□□□□ -1.09
CHRDL2-209ENST00000534276 PRR34Q9NV39 138 aa8.27□□□□□ -1.09
CHRDL2-209ENST00000534276 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
CHRDL2-209ENST00000534276 J3QQQ9 107 aa8.26□□□□□ -1.09
CHRDL2-209ENST00000534276 COX6A2Q02221 97 aa8.26□□□□□ -1.09
CHRDL2-209ENST00000534276 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
CHRDL2-209ENST00000534276 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
CHRDL2-209ENST00000534276 ANGP03950 147 aaKnown RBP8.25□□□□□ -1.09
CHRDL2-209ENST00000534276 IGHV3-30-3P0DP02 117 aa8.25□□□□□ -1.09
CHRDL2-209ENST00000534276 LGALS3P17931 250 aaKnown RBP8.25□□□□□ -1.09
CHRDL2-209ENST00000534276 REG3AQ06141 175 aa8.25□□□□□ -1.09
CHRDL2-209ENST00000534276 LINC01556Q5JQF7 62 aa8.25□□□□□ -1.09
CHRDL2-209ENST00000534276 Q8N1X5 172 aa8.25□□□□□ -1.09
CHRDL2-209ENST00000534276 A0A087WZ39 114 aa8.24□□□□□ -1.09
CHRDL2-209ENST00000534276 TRAV8-4A0A0B4J246 113 aa8.24□□□□□ -1.09
CHRDL2-209ENST00000534276 CTAG1AP78358 180 aa8.24□□□□□ -1.09
CHRDL2-209ENST00000534276 C2orf91Q6ZV80 131 aa8.24□□□□□ -1.09
CHRDL2-209ENST00000534276 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
CHRDL2-209ENST00000534276 ZNF815PA8K554 130 aa8.23□□□□□ -1.09
CHRDL2-209ENST00000534276 K7EP13 123 aa8.23□□□□□ -1.09
CHRDL2-209ENST00000534276 M0R143 59 aa8.23□□□□□ -1.09
CHRDL2-209ENST00000534276 DNAH10OSP0CZ25 163 aa8.23□□□□□ -1.09
CHRDL2-209ENST00000534276 TAL2Q16559 108 aa8.23□□□□□ -1.09
CHRDL2-209ENST00000534276 LBHQ53QV2 105 aaPredicted RBP8.23□□□□□ -1.09
CHRDL2-209ENST00000534276 CD164L2Q6UWJ8 174 aa8.23□□□□□ -1.09
CHRDL2-209ENST00000534276 SMIM1B2RUZ4 78 aa8.22□□□□□ -1.09
CHRDL2-209ENST00000534276 WFDC10BQ8IUB3 73 aa8.22□□□□□ -1.09
CHRDL2-209ENST00000534276 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
CHRDL2-209ENST00000534276 APOBP04114 4563 aaKnown RBP8.22□□□□□ -1.09
CHRDL2-209ENST00000534276 DNAH5Q8TE73 4624 aa8.22□□□□□ -1.09
CHRDL2-209ENST00000534276 EREGO14944 169 aa8.21□□□□□ -1.09
CHRDL2-209ENST00000534276 MIAQ16674 131 aa8.21□□□□□ -1.09
CHRDL2-209ENST00000534276 SFTA2Q6UW10 78 aa8.21□□□□□ -1.09
CHRDL2-209ENST00000534276 TRAV8-3A0A0A6YYJ7 113 aa8.2□□□□□ -1.1
CHRDL2-209ENST00000534276 IGKV3OR2-268A0A0C4DH90 116 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms