RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 HIVEP1P15822 2718 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 TRBV6-4A0A1B0GX49 114 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 TCL1BO95988 128 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 PRSS2P07478 247 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 ODF3L2Q3SX64 289 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 DEFB121Q5J5C9 76 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 LINC01561Q8N1V8 128 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 C11orf72Q8NBR9 251 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 C16orf74Q96GX8 76 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 CHCHD7Q9BUK0 85 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 C16orf95Q9H693 158 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 JPT2Q9H910 190 aa4.17□□□□□ -1.74
CLNS1A-212ENST00000533957 MUC4Q99102 2169 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 TRAV12-2A0A075B6T6 113 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 TRAV13-2A0A0B4J235 113 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 A0A0J9YXV3 536 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 PRYO14603 147 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 SNCGO76070 127 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 SPINK8P0C7L1 97 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 Q1RN00 199 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 LINC01620Q4KN68 170 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 FAM222AQ5U5X8 452 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 SH2D6Q7Z4S9 175 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 CITED1Q99966 193 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 NAA38Q9BRA0 125 aaKnown RBP4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 MAP6D1Q9H9H5 199 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 AGRNO00468 2067 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 ACANP16112 2415 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 CUBNO60494 3623 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 NSD1Q96L73 2696 aaPredicted RBP4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 ZFHX3Q15911 3703 aa4.16□□□□□ -1.74
CLNS1A-212ENST00000533957 SMIM9A6NGZ8 99 aa4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 H0YGX0 51 aa4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 H3BQ85 93 aa4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 TRACP01848 142 aa4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 ATP5G1P05496 136 aa4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 PRB4P10163 310 aaPredicted RBP4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 MEIG1Q5JSS6 88 aa4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 TMEM61Q8N0U2 210 aa4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 SMR3AQ99954 134 aa4.15□□□□□ -1.75
CLNS1A-212ENST00000533957 A0A1B0GX51 115 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 C9JAW5 83 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 K7EQD1 137 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 CCL24O00175 119 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 LST1O00453 97 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 UBE2L6O14933 153 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 IGKV3-20P01619 116 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 INAFM2P0DMQ5 153 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 INSL3P51460 131 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 CKS1BP61024 79 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 GAGE2BQ13066 116 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 GAGE2EQ4V326 116 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 HIST2H2BDQ6DRA6 164 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 Q6ZUT4 128 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 MAPK1IP1LQ8NDC0 245 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 LITAFQ99732 161 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 GAGE2DQ9UEU5 116 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 ICOSQ9Y6W8 199 aa4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 TEP1Q99973 2627 aaKnown RBP4.14□□□□□ -1.75
CLNS1A-212ENST00000533957 FN1P02751 2386 aaKnown RBP4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 COX7A2LO14548 114 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 LY6G6DO95868 133 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 TSPEAR-AS2P59090 65 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 DEFB1P60022 68 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 TTC32Q5I0X7 151 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 C2orf82Q6UX34 121 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 KIR2DL5BQ8NHK3 375 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 UBE2WQ96B02 151 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 TMEM243Q9BU79 118 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 CDC42SE2Q9NRR3 84 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 SVEP1Q4LDE5 3571 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 ZANQ9Y493 2812 aa4.13□□□□□ -1.75
CLNS1A-212ENST00000533957 TLN2Q9Y4G6 2542 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 TRAV8-4A0A0B4J246 113 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 A0A1B0GUV1 79 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 KNCNA6PVL3 124 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 IBA57-AS1B1ANH7 110 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 NDUFA7O95182 113 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 HTN1P15515 57 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 EMP1P54849 157 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 COX17Q14061 63 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 LINC00242Q5T6M2 205 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 LINC00308Q8TCZ7 52 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 FAM104AQ969W3 186 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 CDKN2A-AS1Q9UH64 79 aa4.12□□□□□ -1.75
CLNS1A-212ENST00000533957 RBMY1A1P0DJD3 496 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 RBMY1CP0DJD4 496 aa4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 RPL28P46779 137 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 RBMY1FQ15415 496 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 TMEM95Q3KNT9 176 aa4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 Q6ZSV7 163 aa4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 C1orf158Q8N1D5 194 aa4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 C15orf53Q8NAA6 179 aa4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 OPRPNQ99935 248 aaPredicted RBP4.11□□□□□ -1.75
CLNS1A-212ENST00000533957 IGHV3OR16-12A0A075B7B8 117 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 TRGV1A0A0A0MS02 117 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 RBMY1BA6NDE4 496 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 RBMY1EA6NEQ0 496 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 INAFM1C9JVW0 142 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 IGLV1-51P01701 117 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms