RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
CMTM1-219ENST00000533953 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
CMTM1-219ENST00000533953 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
CMTM1-219ENST00000533953 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
CMTM1-219ENST00000533953 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
CMTM1-219ENST00000533953 IGHV3OR16-9A0A0B4J2B5 98 aa8.58□□□□□ -1.04
CMTM1-219ENST00000533953 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
CMTM1-219ENST00000533953 K7EMI3 77 aa8.58□□□□□ -1.04
CMTM1-219ENST00000533953 TEX43Q6ZNM6 134 aa8.58□□□□□ -1.04
CMTM1-219ENST00000533953 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
CMTM1-219ENST00000533953 VCX2Q9H322 139 aa8.58□□□□□ -1.04
CMTM1-219ENST00000533953 SMCO4Q9NRQ5 59 aa8.58□□□□□ -1.04
CMTM1-219ENST00000533953 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
CMTM1-219ENST00000533953 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
CMTM1-219ENST00000533953 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
CMTM1-219ENST00000533953 UBE2D1P51668 147 aa8.57□□□□□ -1.04
CMTM1-219ENST00000533953 PMCHL1Q16048 86 aa8.57□□□□□ -1.04
CMTM1-219ENST00000533953 Q5VSD8 79 aa8.57□□□□□ -1.04
CMTM1-219ENST00000533953 SCGB3A1Q96QR1 104 aa8.57□□□□□ -1.04
CMTM1-219ENST00000533953 AMELXQ99217 191 aa8.57□□□□□ -1.04
CMTM1-219ENST00000533953 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
CMTM1-219ENST00000533953 ZNF561-AS1K7EIQ3 104 aa8.56□□□□□ -1.04
CMTM1-219ENST00000533953 Q6ZN92 141 aa8.56□□□□□ -1.04
CMTM1-219ENST00000533953 A0A096LNJ9 63 aa8.55□□□□□ -1.04
CMTM1-219ENST00000533953 SYCNQ0VAF6 134 aa8.55□□□□□ -1.04
CMTM1-219ENST00000533953 Q6ZRU5 148 aa8.55□□□□□ -1.04
CMTM1-219ENST00000533953 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
CMTM1-219ENST00000533953 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 SCO1O75880 301 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 LINC00614P0C842 121 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 SPAG11BQ08648 103 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 ERASQ7Z444 233 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 ORAOV1Q8WV07 137 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 C2orf88Q9BSF0 95 aa8.54□□□□□ -1.04
CMTM1-219ENST00000533953 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
CMTM1-219ENST00000533953 G0S2P27469 103 aa8.53□□□□□ -1.04
CMTM1-219ENST00000533953 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
CMTM1-219ENST00000533953 CAMK2N2Q96S95 79 aa8.53□□□□□ -1.04
CMTM1-219ENST00000533953 A0A087WZ39 114 aa8.52□□□□□ -1.05
CMTM1-219ENST00000533953 A0A096LNI7 61 aa8.52□□□□□ -1.05
CMTM1-219ENST00000533953 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
CMTM1-219ENST00000533953 APOMO95445 188 aa8.52□□□□□ -1.05
CMTM1-219ENST00000533953 TRGC2P03986 189 aa8.52□□□□□ -1.05
CMTM1-219ENST00000533953 C10orf25Q5T742 122 aa8.52□□□□□ -1.05
CMTM1-219ENST00000533953 A0A087WYN8 130 aa8.51□□□□□ -1.05
CMTM1-219ENST00000533953 COLCA2A8K830 154 aa8.51□□□□□ -1.05
CMTM1-219ENST00000533953 NPSP0C0P6 89 aa8.51□□□□□ -1.05
CMTM1-219ENST00000533953 MAJINQ3KP22 176 aa8.51□□□□□ -1.05
CMTM1-219ENST00000533953 UNQ6190/PRO20217Q6UXQ8 127 aa8.51□□□□□ -1.05
CMTM1-219ENST00000533953 CST9LQ9H4G1 147 aa8.51□□□□□ -1.05
CMTM1-219ENST00000533953 CIRBPQ14011 172 aaKnown RBP8.5□□□□□ -1.05
CMTM1-219ENST00000533953 KIAA0087Q14695 138 aa8.5□□□□□ -1.05
CMTM1-219ENST00000533953 SPACA4Q8TDM5 124 aa8.5□□□□□ -1.05
CMTM1-219ENST00000533953 CDKN2A-AS1Q9UH64 79 aa8.5□□□□□ -1.05
CMTM1-219ENST00000533953 NDUFA6P56556 154 aa8.49□□□□□ -1.05
CMTM1-219ENST00000533953 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
CMTM1-219ENST00000533953 PAPPA-AS1Q5QFB9 102 aa8.49□□□□□ -1.05
CMTM1-219ENST00000533953 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
CMTM1-219ENST00000533953 OR10D4PQ8NGN7 298 aa8.49□□□□□ -1.05
CMTM1-219ENST00000533953 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
CMTM1-219ENST00000533953 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
CMTM1-219ENST00000533953 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
CMTM1-219ENST00000533953 FAM19A3Q7Z5A8 133 aa8.48□□□□□ -1.05
CMTM1-219ENST00000533953 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
CMTM1-219ENST00000533953 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
CMTM1-219ENST00000533953 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.47□□□□□ -1.05
CMTM1-219ENST00000533953 HBDP02042 147 aa8.47□□□□□ -1.05
CMTM1-219ENST00000533953 RAB5BP61020 215 aa8.47□□□□□ -1.05
CMTM1-219ENST00000533953 PMVKQ15126 192 aa8.47□□□□□ -1.05
CMTM1-219ENST00000533953 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
CMTM1-219ENST00000533953 HERVK_113P63121 156 aa8.46□□□□□ -1.06
CMTM1-219ENST00000533953 BAGE3Q86Y29 109 aa8.46□□□□□ -1.06
CMTM1-219ENST00000533953 FAM19A2Q8N3H0 131 aa8.46□□□□□ -1.06
CMTM1-219ENST00000533953 LINC00469Q8N7U9 141 aa8.46□□□□□ -1.06
CMTM1-219ENST00000533953 STPG4Q8N801 248 aa8.46□□□□□ -1.06
CMTM1-219ENST00000533953 C6orf48Q9UBA6 75 aa8.46□□□□□ -1.06
CMTM1-219ENST00000533953 SRRM2Q9UQ35 2752 aaKnown RBP8.46□□□□□ -1.06
CMTM1-219ENST00000533953 LOC107984640A0A0U1RRK4 108 aa8.45□□□□□ -1.06
CMTM1-219ENST00000533953 TINCRA0A1B0GVN0 87 aa8.45□□□□□ -1.06
CMTM1-219ENST00000533953 NDUFA1O15239 70 aa8.45□□□□□ -1.06
CMTM1-219ENST00000533953 NUPR1O60356 82 aa8.45□□□□□ -1.06
CMTM1-219ENST00000533953 C9orf116Q5BN46 136 aaPredicted RBP8.45□□□□□ -1.06
CMTM1-219ENST00000533953 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
CMTM1-219ENST00000533953 A0A1W2PNN7 141 aa8.44□□□□□ -1.06
CMTM1-219ENST00000533953 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
CMTM1-219ENST00000533953 PLA2G1BP04054 148 aaKnown RBP8.44□□□□□ -1.06
CMTM1-219ENST00000533953 SPINK8P0C7L1 97 aa8.44□□□□□ -1.06
CMTM1-219ENST00000533953 PTTG1IPP53801 180 aa8.44□□□□□ -1.06
CMTM1-219ENST00000533953 LINC00310P59036 64 aa8.44□□□□□ -1.06
CMTM1-219ENST00000533953 SEC11AP67812 179 aa8.44□□□□□ -1.06
CMTM1-219ENST00000533953 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
CMTM1-219ENST00000533953 LINC01561Q8N1V8 128 aa8.44□□□□□ -1.06
CMTM1-219ENST00000533953 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
CMTM1-219ENST00000533953 VPS13BQ7Z7G8 4022 aa8.44□□□□□ -1.06
CMTM1-219ENST00000533953 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
CMTM1-219ENST00000533953 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
CMTM1-219ENST00000533953 PACRGQ96M98 296 aaPredicted RBP8.43□□□□□ -1.06
CMTM1-219ENST00000533953 SMIM1B2RUZ4 78 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms