RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 COX6CP09669 75 aa13.91□□□□□ -0.18
CAPN1-226ENST00000533820 IGHV4-31P0DP07 118 aa13.91□□□□□ -0.18
CAPN1-226ENST00000533820 INSP01308 110 aa13.9□□□□□ -0.18
CAPN1-226ENST00000533820 PEMTQ9UBM1 199 aa13.9□□□□□ -0.18
CAPN1-226ENST00000533820 J3QLI3 93 aa13.9□□□□□ -0.18
CAPN1-226ENST00000533820 Q5XG85 94 aa13.89□□□□□ -0.19
CAPN1-226ENST00000533820 SPANXDQ9BXN6 97 aa13.89□□□□□ -0.19
CAPN1-226ENST00000533820 SPANXCQ9NY87 97 aa13.89□□□□□ -0.19
CAPN1-226ENST00000533820 DEFB114Q30KQ6 69 aa13.89□□□□□ -0.19
CAPN1-226ENST00000533820 CR1P17927 2039 aa13.88□□□□□ -0.19
CAPN1-226ENST00000533820 Q6ZTI0 123 aa13.87□□□□□ -0.19
CAPN1-226ENST00000533820 AKAP9Q99996 3911 aa13.87□□□□□ -0.19
CAPN1-226ENST00000533820 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
CAPN1-226ENST00000533820 C2orf48Q96LS8 159 aa13.87□□□□□ -0.19
CAPN1-226ENST00000533820 APCP25054 2843 aa13.87□□□□□ -0.19
CAPN1-226ENST00000533820 FAM240AA0A1B0GVK7 77 aa13.87□□□□□ -0.19
CAPN1-226ENST00000533820 STHQ8IWL8 128 aa13.86□□□□□ -0.19
CAPN1-226ENST00000533820 MRAPQ8TCY5 172 aa13.86□□□□□ -0.19
CAPN1-226ENST00000533820 CRYGAP11844 174 aa13.86□□□□□ -0.19
CAPN1-226ENST00000533820 ODF3L2Q3SX64 289 aa13.86□□□□□ -0.19
CAPN1-226ENST00000533820 LINC00242Q5T6M2 205 aa13.86□□□□□ -0.19
CAPN1-226ENST00000533820 IMUPQ9GZP8 106 aa13.84□□□□□ -0.19
CAPN1-226ENST00000533820 C1orf158Q8N1D5 194 aa13.84□□□□□ -0.19
CAPN1-226ENST00000533820 RPL35AP18077 110 aaKnown RBP13.84□□□□□ -0.19
CAPN1-226ENST00000533820 NBEAL2Q6ZNJ1 2754 aa13.83□□□□□ -0.2
CAPN1-226ENST00000533820 CIRBPQ14011 172 aaKnown RBP13.83□□□□□ -0.2
CAPN1-226ENST00000533820 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.2
CAPN1-226ENST00000533820 C4orf3Q8WVX3 66 aa13.83□□□□□ -0.2
CAPN1-226ENST00000533820 A8MTW9 85 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 H3BT86 120 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 NDUFA1O15239 70 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 NTM-AS1Q6ZSK4 140 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 Q8N2B8 174 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 LINC00308Q8TCZ7 52 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 BEAN1Q3B7T3 259 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 Q96MF0 132 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 WFDC10AQ9H1F0 79 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 FSHBP01225 129 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 PLA2G2AP14555 144 aa13.82□□□□□ -0.2
CAPN1-226ENST00000533820 LST1O00453 97 aa13.81□□□□□ -0.2
CAPN1-226ENST00000533820 SOSTDC1Q6X4U4 206 aa13.81□□□□□ -0.2
CAPN1-226ENST00000533820 NOP10Q9NPE3 64 aaKnown RBP13.81□□□□□ -0.2
CAPN1-226ENST00000533820 LINC00643Q86TS7 51 aa13.8□□□□□ -0.2
CAPN1-226ENST00000533820 PIK3CD-AS1Q5SR53 167 aa13.8□□□□□ -0.2
CAPN1-226ENST00000533820 GCN1Q92616 2671 aaKnown RBP13.8□□□□□ -0.2
CAPN1-226ENST00000533820 LOC100131303A0A0U1RQF7 123 aa13.79□□□□□ -0.2
CAPN1-226ENST00000533820 RPL36AP83881 106 aaKnown RBP13.79□□□□□ -0.2
CAPN1-226ENST00000533820 RPL36ALQ969Q0 106 aaKnown RBP13.79□□□□□ -0.2
CAPN1-226ENST00000533820 SMIM1B2RUZ4 78 aa13.79□□□□□ -0.2
CAPN1-226ENST00000533820 F8WDY8 70 aa13.79□□□□□ -0.2
CAPN1-226ENST00000533820 TIRAPP58753 221 aa13.79□□□□□ -0.2
CAPN1-226ENST00000533820 LINC00336Q6ZUF6 198 aa13.79□□□□□ -0.2
CAPN1-226ENST00000533820 TOMM7Q9P0U1 55 aa13.78□□□□□ -0.2
CAPN1-226ENST00000533820 TMEM258P61165 79 aa13.77□□□□□ -0.21
CAPN1-226ENST00000533820 K7EQD1 137 aa13.76□□□□□ -0.21
CAPN1-226ENST00000533820 IGLV5-45A0A087WSX0 123 aa13.76□□□□□ -0.21
CAPN1-226ENST00000533820 DEFB121Q5J5C9 76 aa13.76□□□□□ -0.21
CAPN1-226ENST00000533820 SDIM1Q6ZPB5 146 aa13.75□□□□□ -0.21
CAPN1-226ENST00000533820 LINC01600Q96MT4 127 aa13.75□□□□□ -0.21
CAPN1-226ENST00000533820 UBR5O95071 2799 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-226ENST00000533820 TRGV2A0A075B6R0 118 aa13.75□□□□□ -0.21
CAPN1-226ENST00000533820 IGLV5-39A0A0G2JS06 123 aa13.75□□□□□ -0.21
CAPN1-226ENST00000533820 TIMM17BO60830 172 aa13.75□□□□□ -0.21
CAPN1-226ENST00000533820 UBE2L6O14933 153 aa13.74□□□□□ -0.21
CAPN1-226ENST00000533820 ATOX1O00244 68 aa13.74□□□□□ -0.21
CAPN1-226ENST00000533820 ATP5G1P05496 136 aa13.74□□□□□ -0.21
CAPN1-226ENST00000533820 BBC3Q96PG8 261 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-226ENST00000533820 PFN2P35080 140 aa13.73□□□□□ -0.21
CAPN1-226ENST00000533820 CCL24O00175 119 aa13.72□□□□□ -0.21
CAPN1-226ENST00000533820 MALP21145 153 aa13.72□□□□□ -0.21
CAPN1-226ENST00000533820 CDC42SE2Q9NRR3 84 aa13.72□□□□□ -0.21
CAPN1-226ENST00000533820 SEC61GP60059 68 aa13.72□□□□□ -0.21
CAPN1-226ENST00000533820 PRO0628Q9UI54 55 aa13.72□□□□□ -0.21
CAPN1-226ENST00000533820 NBPF19A0A087WUL8 3843 aa13.72□□□□□ -0.21
CAPN1-226ENST00000533820 DEFB113Q30KQ7 82 aa13.72□□□□□ -0.21
CAPN1-226ENST00000533820 C5orf38Q86SI9 138 aa13.72□□□□□ -0.21
CAPN1-226ENST00000533820 HIVEP2P31629 2446 aa13.71□□□□□ -0.21
CAPN1-226ENST00000533820 A0A087WVE0 104 aa13.71□□□□□ -0.21
CAPN1-226ENST00000533820 IGKV3D-7A0A0C4DH55 119 aa13.71□□□□□ -0.21
CAPN1-226ENST00000533820 ACYP1P07311 99 aa13.71□□□□□ -0.21
CAPN1-226ENST00000533820 Q9HAA7 133 aa13.7□□□□□ -0.22
CAPN1-226ENST00000533820 DNAJC9-AS1A6NH13 148 aa13.69□□□□□ -0.22
CAPN1-226ENST00000533820 COX7A2LO14548 114 aa13.69□□□□□ -0.22
CAPN1-226ENST00000533820 FAM218AQ96MZ4 157 aa13.69□□□□□ -0.22
CAPN1-226ENST00000533820 TMEM243Q9BU79 118 aa13.69□□□□□ -0.22
CAPN1-226ENST00000533820 C11orf68Q9H3H3 251 aaKnown RBP13.69□□□□□ -0.22
CAPN1-226ENST00000533820 DAZ2Q13117 558 aaKnown RBP13.68□□□□□ -0.22
CAPN1-226ENST00000533820 DAZ4Q86SG3 579 aaKnown RBP13.68□□□□□ -0.22
CAPN1-226ENST00000533820 DAZ3Q9NR90 486 aaKnown RBP13.68□□□□□ -0.22
CAPN1-226ENST00000533820 WFDC11Q8NEX6 87 aa13.68□□□□□ -0.22
CAPN1-226ENST00000533820 A0A0U1RQV1 116 aa13.67□□□□□ -0.22
CAPN1-226ENST00000533820 HIST2H2BCQ6DN03 193 aa13.67□□□□□ -0.22
CAPN1-226ENST00000533820 TRGV4A0A0C4DH28 118 aa13.66□□□□□ -0.22
CAPN1-226ENST00000533820 RPL18AQ02543 176 aaKnown RBP13.66□□□□□ -0.22
CAPN1-226ENST00000533820 MIR7-3HGQ8N6C7 128 aa13.66□□□□□ -0.22
CAPN1-226ENST00000533820 ESM1Q9NQ30 184 aa13.66□□□□□ -0.22
CAPN1-226ENST00000533820 FAM236DA0A1B0GTK5 79 aa13.66□□□□□ -0.22
CAPN1-226ENST00000533820 FAM236CP0DP71 79 aa13.66□□□□□ -0.22
CAPN1-226ENST00000533820 TRBV10-1A0A0K0K1A3 114 aa13.65□□□□□ -0.22
CAPN1-226ENST00000533820 BAALC-AS2P0C853 105 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms