RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 ATP6V1G2O95670 118 aa5.6□□□□□ -1.51
CSDE1-215ENST00000533818 S100A9P06702 114 aaKnown RBP5.6□□□□□ -1.51
CSDE1-215ENST00000533818 RPS20P60866 119 aaKnown RBP5.6□□□□□ -1.51
CSDE1-215ENST00000533818 PNRC1Q12796 327 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-215ENST00000533818 CST9LP1Q5W188 147 aa5.6□□□□□ -1.51
CSDE1-215ENST00000533818 Q6Q795 121 aa5.6□□□□□ -1.51
CSDE1-215ENST00000533818 FAM210AQ96ND0 272 aa5.6□□□□□ -1.51
CSDE1-215ENST00000533818 TCEAL7Q9BRU2 100 aa5.6□□□□□ -1.51
CSDE1-215ENST00000533818 RNASE7Q9H1E1 156 aaKnown RBP5.6□□□□□ -1.51
CSDE1-215ENST00000533818 NUDT15Q9NV35 164 aa5.6□□□□□ -1.51
CSDE1-215ENST00000533818 S100A5P33763 92 aa5.59□□□□□ -1.51
CSDE1-215ENST00000533818 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.51
CSDE1-215ENST00000533818 SERF2P84101 59 aa5.59□□□□□ -1.51
CSDE1-215ENST00000533818 SMAGPQ0VAQ4 97 aa5.59□□□□□ -1.51
CSDE1-215ENST00000533818 TWIST1Q15672 202 aa5.59□□□□□ -1.51
CSDE1-215ENST00000533818 TEX261Q6UWH6 196 aa5.59□□□□□ -1.51
CSDE1-215ENST00000533818 Q6ZUT4 128 aa5.59□□□□□ -1.51
CSDE1-215ENST00000533818 PSMG3Q9BT73 122 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-215ENST00000533818 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
CSDE1-215ENST00000533818 TNFSF18Q9UNG2 199 aa5.59□□□□□ -1.51
CSDE1-215ENST00000533818 MT2AP02795 61 aa5.58□□□□□ -1.52
CSDE1-215ENST00000533818 ZNF726P1Q15940 193 aa5.58□□□□□ -1.52
CSDE1-215ENST00000533818 PPP1R1CQ8WVI7 109 aa5.58□□□□□ -1.52
CSDE1-215ENST00000533818 TRBV6-5A0A0K0K1A5 114 aa5.57□□□□□ -1.52
CSDE1-215ENST00000533818 C9orf92A6NGG3 77 aa5.57□□□□□ -1.52
CSDE1-215ENST00000533818 FHITP49789 147 aa5.57□□□□□ -1.52
CSDE1-215ENST00000533818 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
CSDE1-215ENST00000533818 FAM19A1Q7Z5A9 133 aa5.57□□□□□ -1.52
CSDE1-215ENST00000533818 CCDC32Q9BV29 185 aa5.57□□□□□ -1.52
CSDE1-215ENST00000533818 ST20Q9HBF5 79 aa5.57□□□□□ -1.52
CSDE1-215ENST00000533818 CTXND1A0A1B0GTU2 59 aa5.56□□□□□ -1.52
CSDE1-215ENST00000533818 H2AFB2P0C5Z0 115 aa5.56□□□□□ -1.52
CSDE1-215ENST00000533818 CBLN2Q8IUK8 224 aa5.56□□□□□ -1.52
CSDE1-215ENST00000533818 GNB1LQ9BYB4 327 aa5.56□□□□□ -1.52
CSDE1-215ENST00000533818 XKRY2A2RUG3 117 aa5.55□□□□□ -1.52
CSDE1-215ENST00000533818 RAB19A4D1S5 217 aa5.55□□□□□ -1.52
CSDE1-215ENST00000533818 MPC2O95563 127 aa5.55□□□□□ -1.52
CSDE1-215ENST00000533818 IFNA1P01562 189 aa5.55□□□□□ -1.52
CSDE1-215ENST00000533818 PET100P0DJ07 73 aa5.55□□□□□ -1.52
CSDE1-215ENST00000533818 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
CSDE1-215ENST00000533818 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
CSDE1-215ENST00000533818 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
CSDE1-215ENST00000533818 MT1FP04733 61 aa5.54□□□□□ -1.52
CSDE1-215ENST00000533818 FCER1GP30273 86 aa5.54□□□□□ -1.52
CSDE1-215ENST00000533818 SMIM15Q7Z3B0 74 aa5.54□□□□□ -1.52
CSDE1-215ENST00000533818 C9orf62Q8N4C0 152 aa5.54□□□□□ -1.52
CSDE1-215ENST00000533818 TGIF2-C20orf24A0A0A6YYL0 155 aa5.53□□□□□ -1.52
CSDE1-215ENST00000533818 TRBV27A0A0K0K1C4 114 aa5.53□□□□□ -1.52
CSDE1-215ENST00000533818 SCO2A0A1W2PP80 73 aa5.53□□□□□ -1.52
CSDE1-215ENST00000533818 PLA2G10O15496 165 aa5.53□□□□□ -1.52
CSDE1-215ENST00000533818 LYRM1O43325 122 aa5.53□□□□□ -1.52
CSDE1-215ENST00000533818 POLR2KP53803 58 aaKnown RBP5.53□□□□□ -1.52
CSDE1-215ENST00000533818 HIGD2AQ9BW72 106 aa5.53□□□□□ -1.52
CSDE1-215ENST00000533818 MRPL18Q9H0U6 180 aaKnown RBP5.53□□□□□ -1.52
CSDE1-215ENST00000533818 IL7P13232 177 aa5.52□□□□□ -1.53
CSDE1-215ENST00000533818 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
CSDE1-215ENST00000533818 CKS1BP61024 79 aa5.52□□□□□ -1.53
CSDE1-215ENST00000533818 TMUB2Q71RG4 321 aa5.52□□□□□ -1.53
CSDE1-215ENST00000533818 NKAPP1Q8N9T2 125 aa5.52□□□□□ -1.53
CSDE1-215ENST00000533818 TIMM21Q9BVV7 248 aa5.52□□□□□ -1.53
CSDE1-215ENST00000533818 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
CSDE1-215ENST00000533818 PAGE4O60829 102 aa5.51□□□□□ -1.53
CSDE1-215ENST00000533818 H2BFSP57053 126 aa5.51□□□□□ -1.53
CSDE1-215ENST00000533818 CNFNQ9BYD5 112 aa5.51□□□□□ -1.53
CSDE1-215ENST00000533818 TMEM126AQ9H061 195 aa5.51□□□□□ -1.53
CSDE1-215ENST00000533818 TMEM238C9JI98 176 aa5.5□□□□□ -1.53
CSDE1-215ENST00000533818 NOL3O60936 208 aaKnown RBP5.5□□□□□ -1.53
CSDE1-215ENST00000533818 PRSS2P07478 247 aa5.5□□□□□ -1.53
CSDE1-215ENST00000533818 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-215ENST00000533818 IGLV5-37A0A075B6J1 123 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 MAP1LC3B2A6NCE7 125 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 IFITM10A6NMD0 228 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 VCYO14598 125 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 SCO1O75880 301 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 C6orf226Q5I0X4 101 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 TMEM18Q96B42 140 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 MAP1LC3BQ9GZQ8 125 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 TOMM7Q9P0U1 55 aa5.49□□□□□ -1.53
CSDE1-215ENST00000533818 TMEM238LA0A1B0GVL6 79 aa5.48□□□□□ -1.53
CSDE1-215ENST00000533818 RPL35P42766 123 aaKnown RBP5.48□□□□□ -1.53
CSDE1-215ENST00000533818 HBBP68871 147 aa5.48□□□□□ -1.53
CSDE1-215ENST00000533818 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
CSDE1-215ENST00000533818 GEMIN7Q9H840 131 aaKnown RBP5.48□□□□□ -1.53
CSDE1-215ENST00000533818 LINC01551Q86U37 167 aa5.47□□□□□ -1.53
CSDE1-215ENST00000533818 KMT2DO14686 5537 aa5.46□□□□□ -1.53
CSDE1-215ENST00000533818 M0R378 163 aa5.46□□□□□ -1.54
CSDE1-215ENST00000533818 PFDN1O60925 122 aa5.46□□□□□ -1.54
CSDE1-215ENST00000533818 IGLV6-57P01721 117 aa5.46□□□□□ -1.54
CSDE1-215ENST00000533818 MOBPQ13875 183 aa5.46□□□□□ -1.54
CSDE1-215ENST00000533818 AKR1C8PQ5T2L2 129 aa5.46□□□□□ -1.54
CSDE1-215ENST00000533818 SSBP3-AS1Q7Z2R9 100 aa5.46□□□□□ -1.54
CSDE1-215ENST00000533818 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
CSDE1-215ENST00000533818 IGLV9-49A0A0B4J1Y8 123 aa5.44□□□□□ -1.54
CSDE1-215ENST00000533818 FAM240BA0A1B0GVZ2 78 aa5.44□□□□□ -1.54
CSDE1-215ENST00000533818 LGALS3P17931 250 aaKnown RBP5.44□□□□□ -1.54
CSDE1-215ENST00000533818 RPL39P62891 51 aaKnown RBP5.44□□□□□ -1.54
CSDE1-215ENST00000533818 MRPS36P82909 103 aaKnown RBP5.44□□□□□ -1.54
CSDE1-215ENST00000533818 CENPWQ5EE01 88 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms