RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
NUP98-220ENST00000533346 SPACA4Q8TDM5 124 aa6.27□□□□□ -1.41
NUP98-220ENST00000533346 AMELXQ99217 191 aa6.27□□□□□ -1.41
NUP98-220ENST00000533346 CYSLTR1Q9Y271 337 aa6.27□□□□□ -1.41
NUP98-220ENST00000533346 TRAV13-1A0A0B4J241 112 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 LOC389332A0A1B0GUA5 103 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 PANO1I0J062 215 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 RNF151Q2KHN1 245 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 HIGD2BQ4VC39 106 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 RNASE13Q5GAN3 156 aaKnown RBP6.26□□□□□ -1.41
NUP98-220ENST00000533346 OR10D4PQ8NGN7 298 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 TMEM141Q96I45 108 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 OPRPNQ99935 248 aaPredicted RBP6.26□□□□□ -1.41
NUP98-220ENST00000533346 ALKBH7Q9BT30 221 aaPredicted RBP6.26□□□□□ -1.41
NUP98-220ENST00000533346 RPS10P5Q9NQ39 176 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 PLAC8Q9NZF1 115 aa6.26□□□□□ -1.41
NUP98-220ENST00000533346 SNAPINO95295 136 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 MALP21145 153 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 COX6A2Q02221 97 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 SYCNQ0VAF6 134 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 LINC00242Q5T6M2 205 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 SVBPQ8N300 66 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 TOMM6Q96B49 74 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 TIMM17AQ99595 171 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 LINC00474Q9P2X8 69 aa6.25□□□□□ -1.41
NUP98-220ENST00000533346 IGLV4-69A0A075B6H9 119 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 A0A087WZ39 114 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 IFITM10A6NMD0 228 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 UBE2D1P51668 147 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 NDUFA5Q16718 116 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 KIAA1644Q3SXP7 199 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 PAPPA-AS1Q5QFB9 102 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 TEX43Q6ZNM6 134 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 PRSS3P2Q8NHM4 247 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 CARD19Q96LW7 228 aa6.24□□□□□ -1.41
NUP98-220ENST00000533346 PKHD1L1Q86WI1 4243 aa6.23□□□□□ -1.41
NUP98-220ENST00000533346 A0A087WYN8 130 aa6.23□□□□□ -1.41
NUP98-220ENST00000533346 APOC3P02656 99 aa6.23□□□□□ -1.41
NUP98-220ENST00000533346 ERASQ7Z444 233 aa6.23□□□□□ -1.41
NUP98-220ENST00000533346 C5orf38Q86SI9 138 aa6.23□□□□□ -1.41
NUP98-220ENST00000533346 MRPL18Q9H0U6 180 aaKnown RBP6.23□□□□□ -1.41
NUP98-220ENST00000533346 MRPL35Q9NZE8 188 aaKnown RBP6.23□□□□□ -1.41
NUP98-220ENST00000533346 TGIF2-C20orf24A0A0A6YYL0 155 aa6.22□□□□□ -1.41
NUP98-220ENST00000533346 TLX1NBP0CAT3 122 aa6.22□□□□□ -1.41
NUP98-220ENST00000533346 SEC11AP67812 179 aa6.22□□□□□ -1.41
NUP98-220ENST00000533346 Q6ZN92 141 aa6.22□□□□□ -1.41
NUP98-220ENST00000533346 Q6ZRU5 148 aa6.22□□□□□ -1.41
NUP98-220ENST00000533346 YPEL4Q96NS1 127 aa6.22□□□□□ -1.41
NUP98-220ENST00000533346 C2orf88Q9BSF0 95 aa6.22□□□□□ -1.41
NUP98-220ENST00000533346 VCX2Q9H322 139 aa6.22□□□□□ -1.41
NUP98-220ENST00000533346 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
NUP98-220ENST00000533346 A0A096LNI7 61 aa6.21□□□□□ -1.42
NUP98-220ENST00000533346 CHTF8P0CG12 524 aa6.21□□□□□ -1.42
NUP98-220ENST00000533346 FABP9Q0Z7S8 132 aa6.21□□□□□ -1.42
NUP98-220ENST00000533346 KIAA0087Q14695 138 aa6.21□□□□□ -1.42
NUP98-220ENST00000533346 LINC00526Q96FQ7 95 aa6.21□□□□□ -1.42
NUP98-220ENST00000533346 CAMK2N2Q96S95 79 aa6.21□□□□□ -1.42
NUP98-220ENST00000533346 LOC107984640A0A0U1RRK4 108 aa6.2□□□□□ -1.42
NUP98-220ENST00000533346 KRTAP29-1A8MX34 341 aaPredicted RBP6.2□□□□□ -1.42
NUP98-220ENST00000533346 PTTG1IPP53801 180 aa6.2□□□□□ -1.42
NUP98-220ENST00000533346 HERVK_113P63121 156 aa6.2□□□□□ -1.42
NUP98-220ENST00000533346 SPAG11BQ08648 103 aa6.2□□□□□ -1.42
NUP98-220ENST00000533346 ORAOV1Q8WV07 137 aa6.2□□□□□ -1.42
NUP98-220ENST00000533346 TRAPPC1Q9Y5R8 145 aa6.2□□□□□ -1.42
NUP98-220ENST00000533346 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.19□□□□□ -1.42
NUP98-220ENST00000533346 RPL37AP61513 92 aaKnown RBP6.19□□□□□ -1.42
NUP98-220ENST00000533346 MAJINQ3KP22 176 aa6.19□□□□□ -1.42
NUP98-220ENST00000533346 C18orf32Q8TCD1 76 aa6.19□□□□□ -1.42
NUP98-220ENST00000533346 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
NUP98-220ENST00000533346 HMCN2Q8NDA2 5059 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 IGLV5-45A0A087WSX0 123 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 TRBV30A0A0K0K1B3 111 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 NDUFA1O15239 70 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 LINC00614P0C842 121 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 ODF1Q14990 250 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 STPG4Q8N801 248 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 DPH3Q96FX2 82 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 URB1-AS1Q96HZ7 61 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 SCGB3A1Q96QR1 104 aa6.18□□□□□ -1.42
NUP98-220ENST00000533346 A0A096LNJ9 63 aa6.17□□□□□ -1.42
NUP98-220ENST00000533346 IGKV2-24A0A0C4DH68 120 aa6.17□□□□□ -1.42
NUP98-220ENST00000533346 OXTP01178 125 aa6.17□□□□□ -1.42
NUP98-220ENST00000533346 FA2HQ7L5A8 372 aa6.17□□□□□ -1.42
NUP98-220ENST00000533346 Q8IZM0 81 aa6.17□□□□□ -1.42
NUP98-220ENST00000533346 SMCO4Q9NRQ5 59 aa6.17□□□□□ -1.42
NUP98-220ENST00000533346 FLG2Q5D862 2391 aaPredicted RBP6.17□□□□□ -1.42
NUP98-220ENST00000533346 TINCRA0A1B0GVN0 87 aa6.16□□□□□ -1.42
NUP98-220ENST00000533346 RAB5BP61020 215 aa6.16□□□□□ -1.42
NUP98-220ENST00000533346 PMVKQ15126 192 aa6.16□□□□□ -1.42
NUP98-220ENST00000533346 ZC2HC1BQ5TFG8 222 aa6.16□□□□□ -1.42
NUP98-220ENST00000533346 C7orf33Q8WU49 177 aa6.16□□□□□ -1.42
NUP98-220ENST00000533346 CST9LQ9H4G1 147 aa6.16□□□□□ -1.42
NUP98-220ENST00000533346 C6orf48Q9UBA6 75 aa6.16□□□□□ -1.42
NUP98-220ENST00000533346 A0A0J9YXV3 536 aa6.15□□□□□ -1.42
NUP98-220ENST00000533346 PDZD11Q5EBL8 140 aa6.15□□□□□ -1.42
NUP98-220ENST00000533346 C10orf25Q5T742 122 aa6.15□□□□□ -1.42
NUP98-220ENST00000533346 UNQ6190/PRO20217Q6UXQ8 127 aa6.15□□□□□ -1.42
NUP98-220ENST00000533346 CDKN2A-AS1Q9UH64 79 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms