RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 Q6ZN92 141 aa7.77□□□□□ -1.17
SSBP3-214ENST00000533209 VCX2Q9H322 139 aa7.77□□□□□ -1.17
SSBP3-214ENST00000533209 HSPG2P98160 4391 aa7.76□□□□□ -1.17
SSBP3-214ENST00000533209 XGP55808 180 aa7.76□□□□□ -1.17
SSBP3-214ENST00000533209 RAB5BP61020 215 aa7.76□□□□□ -1.17
SSBP3-214ENST00000533209 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
SSBP3-214ENST00000533209 C9orf163Q8N9P6 203 aa7.76□□□□□ -1.17
SSBP3-214ENST00000533209 C2orf88Q9BSF0 95 aa7.76□□□□□ -1.17
SSBP3-214ENST00000533209 FAM30AQ9NZY2 134 aa7.76□□□□□ -1.17
SSBP3-214ENST00000533209 DNAH8Q96JB1 4490 aa7.76□□□□□ -1.17
SSBP3-214ENST00000533209 MALP21145 153 aa7.75□□□□□ -1.17
SSBP3-214ENST00000533209 COX6A2Q02221 97 aa7.75□□□□□ -1.17
SSBP3-214ENST00000533209 PAPPA-AS1Q5QFB9 102 aa7.75□□□□□ -1.17
SSBP3-214ENST00000533209 HBDP02042 147 aa7.74□□□□□ -1.17
SSBP3-214ENST00000533209 PMCHL1Q16048 86 aa7.74□□□□□ -1.17
SSBP3-214ENST00000533209 Q6ZSA8 131 aa7.74□□□□□ -1.17
SSBP3-214ENST00000533209 FAM19A3Q7Z5A8 133 aa7.74□□□□□ -1.17
SSBP3-214ENST00000533209 LINC00526Q96FQ7 95 aa7.74□□□□□ -1.17
SSBP3-214ENST00000533209 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-214ENST00000533209 PDZD11Q5EBL8 140 aa7.73□□□□□ -1.17
SSBP3-214ENST00000533209 CHCHD1Q96BP2 118 aaKnown RBP7.73□□□□□ -1.17
SSBP3-214ENST00000533209 A0A087WZ39 114 aa7.72□□□□□ -1.17
SSBP3-214ENST00000533209 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-214ENST00000533209 APOMO95445 188 aa7.72□□□□□ -1.17
SSBP3-214ENST00000533209 SDIM1Q6ZPB5 146 aa7.72□□□□□ -1.17
SSBP3-214ENST00000533209 KRTAP17-1Q9BYP8 105 aa7.72□□□□□ -1.17
SSBP3-214ENST00000533209 CST9LQ9H4G1 147 aa7.72□□□□□ -1.17
SSBP3-214ENST00000533209 IGLV4-69A0A075B6H9 119 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 IGHV3-64A0A075B6Q5 118 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 A0A0J9YXV3 536 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 ZNF561-AS1K7EIQ3 104 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 LINC00310P59036 64 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 HAMPP81172 84 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 PMVKQ15126 192 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 BAGE3Q86Y29 109 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 OR10D4PQ8NGN7 298 aa7.71□□□□□ -1.18
SSBP3-214ENST00000533209 ATP6V1G1O75348 118 aa7.7□□□□□ -1.18
SSBP3-214ENST00000533209 S100A1P23297 94 aa7.7□□□□□ -1.18
SSBP3-214ENST00000533209 SEC11AP67812 179 aa7.7□□□□□ -1.18
SSBP3-214ENST00000533209 SPAG11BQ08648 103 aa7.7□□□□□ -1.18
SSBP3-214ENST00000533209 LINC01561Q8N1V8 128 aa7.7□□□□□ -1.18
SSBP3-214ENST00000533209 ORAOV1Q8WV07 137 aa7.7□□□□□ -1.18
SSBP3-214ENST00000533209 FAT1Q14517 4588 aa7.69□□□□□ -1.18
SSBP3-214ENST00000533209 SERF1AO75920 110 aa7.69□□□□□ -1.18
SSBP3-214ENST00000533209 HERVK_113P63121 156 aa7.69□□□□□ -1.18
SSBP3-214ENST00000533209 SYCNQ0VAF6 134 aa7.69□□□□□ -1.18
SSBP3-214ENST00000533209 C2orf48Q96LS8 159 aa7.69□□□□□ -1.18
SSBP3-214ENST00000533209 CARD19Q96LW7 228 aa7.69□□□□□ -1.18
SSBP3-214ENST00000533209 CDKN2A-AS1Q9UH64 79 aa7.69□□□□□ -1.18
SSBP3-214ENST00000533209 TINCRA0A1B0GVN0 87 aa7.68□□□□□ -1.18
SSBP3-214ENST00000533209 PANO1I0J062 215 aa7.68□□□□□ -1.18
SSBP3-214ENST00000533209 HSBP1O75506 76 aa7.68□□□□□ -1.18
SSBP3-214ENST00000533209 ATP5LO75964 103 aa7.68□□□□□ -1.18
SSBP3-214ENST00000533209 KIAA0087Q14695 138 aa7.68□□□□□ -1.18
SSBP3-214ENST00000533209 Q6ZRU5 148 aa7.68□□□□□ -1.18
SSBP3-214ENST00000533209 FAM19A2Q8N3H0 131 aa7.68□□□□□ -1.18
SSBP3-214ENST00000533209 CHAC1Q9BUX1 264 aa7.68□□□□□ -1.18
SSBP3-214ENST00000533209 GEMIN7Q9H840 131 aaKnown RBP7.68□□□□□ -1.18
SSBP3-214ENST00000533209 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-214ENST00000533209 IGLV5-45A0A087WSX0 123 aa7.67□□□□□ -1.18
SSBP3-214ENST00000533209 NUPR1O60356 82 aa7.67□□□□□ -1.18
SSBP3-214ENST00000533209 NDUFA6P56556 154 aa7.67□□□□□ -1.18
SSBP3-214ENST00000533209 SCXQ7RTU7 201 aa7.67□□□□□ -1.18
SSBP3-214ENST00000533209 CAMK2N2Q96S95 79 aa7.67□□□□□ -1.18
SSBP3-214ENST00000533209 F8WDY8 70 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BKO60814 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BJP06899 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BOP23527 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BBP33778 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BDP58876 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BCP62807 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 CIRBPQ14011 172 aaKnown RBP7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST2H2BEQ16778 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-214ENST00000533209 Q8N1X5 172 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 LINC00469Q8N7U9 141 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 CIRBP-AS1Q8TBR5 109 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BHQ93079 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BNQ99877 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 HIST1H2BMQ99879 126 aa7.66□□□□□ -1.18
SSBP3-214ENST00000533209 SMR3BP02814 79 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-214ENST00000533209 CHTF8P0CG12 524 aa7.65□□□□□ -1.18
SSBP3-214ENST00000533209 IGLC3P0DOY3 106 aa7.65□□□□□ -1.18
SSBP3-214ENST00000533209 C10orf25Q5T742 122 aa7.65□□□□□ -1.18
SSBP3-214ENST00000533209 IFI27L1Q96BM0 104 aa7.65□□□□□ -1.18
SSBP3-214ENST00000533209 SMIM1B2RUZ4 78 aa7.64□□□□□ -1.19
SSBP3-214ENST00000533209 NDUFA1O15239 70 aa7.64□□□□□ -1.19
SSBP3-214ENST00000533209 RNF151Q2KHN1 245 aa7.64□□□□□ -1.19
SSBP3-214ENST00000533209 UNQ6190/PRO20217Q6UXQ8 127 aa7.64□□□□□ -1.19
SSBP3-214ENST00000533209 SPACA4Q8TDM5 124 aa7.64□□□□□ -1.19
SSBP3-214ENST00000533209 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
SSBP3-214ENST00000533209 A0A096LNI7 61 aa7.63□□□□□ -1.19
SSBP3-214ENST00000533209 C2orf82Q6UX34 121 aa7.63□□□□□ -1.19
SSBP3-214ENST00000533209 Q8IZM0 81 aa7.63□□□□□ -1.19
SSBP3-214ENST00000533209 PACRGQ96M98 296 aaPredicted RBP7.63□□□□□ -1.19
SSBP3-214ENST00000533209 MRPL35Q9NZE8 188 aaKnown RBP7.63□□□□□ -1.19
SSBP3-214ENST00000533209 TRAV12-1A0A0B4J245 112 aa7.62□□□□□ -1.19
SSBP3-214ENST00000533209 C11orf86A6NJI1 115 aa7.62□□□□□ -1.19
SSBP3-214ENST00000533209 LEPROTL1O95214 131 aa7.62□□□□□ -1.19
SSBP3-214ENST00000533209 PRSS2P07478 247 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms