RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 SLPIP03973 132 aa6.46□□□□□ -1.37
CTNND1-232ENST00000532649 COA6Q5JTJ3 125 aaKnown RBP6.46□□□□□ -1.37
CTNND1-232ENST00000532649 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.37
CTNND1-232ENST00000532649 XAGE1AQ9HD64 81 aa6.46□□□□□ -1.38
CTNND1-232ENST00000532649 IBA57-AS1B1ANH7 110 aa6.46□□□□□ -1.38
CTNND1-232ENST00000532649 NDUFC1O43677 76 aa6.46□□□□□ -1.38
CTNND1-232ENST00000532649 ATG2AQ2TAZ0 1938 aa6.45□□□□□ -1.38
CTNND1-232ENST00000532649 ANKRD11Q6UB99 2663 aaPredicted RBP6.45□□□□□ -1.38
CTNND1-232ENST00000532649 A0A0J9YXY3 114 aa6.45□□□□□ -1.38
CTNND1-232ENST00000532649 CEP295Q9C0D2 2601 aa6.45□□□□□ -1.38
CTNND1-232ENST00000532649 LINC00467Q9BRT7 94 aa6.45□□□□□ -1.38
CTNND1-232ENST00000532649 RPL37AP8A6NKH3 93 aa6.45□□□□□ -1.38
CTNND1-232ENST00000532649 ADAMTS20P59510 1910 aa6.45□□□□□ -1.38
CTNND1-232ENST00000532649 A0A1B0GXF2 115 aa6.45□□□□□ -1.38
CTNND1-232ENST00000532649 TRBV6-8A0A0A6YYG3 113 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 NDUFA7O95182 113 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 CDPF1Q6NVV7 123 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 ESRGQ1W209 222 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 PTH2Q96A98 100 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 KPRPQ5T749 579 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-232ENST00000532649 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 OXLD1Q5BKU9 147 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 SNURFQ9Y675 71 aa6.44□□□□□ -1.38
CTNND1-232ENST00000532649 CFAP126Q5VTH2 177 aa6.43□□□□□ -1.38
CTNND1-232ENST00000532649 RETNLBQ9BQ08 111 aa6.43□□□□□ -1.38
CTNND1-232ENST00000532649 TRBV27A0A0K0K1C4 114 aa6.43□□□□□ -1.38
CTNND1-232ENST00000532649 LINC00337Q8N6G1 96 aa6.43□□□□□ -1.38
CTNND1-232ENST00000532649 NEXN-AS1Q8NBZ9 246 aa6.43□□□□□ -1.38
CTNND1-232ENST00000532649 TTTY13Q9BZ97 58 aa6.43□□□□□ -1.38
CTNND1-232ENST00000532649 FAM30AQ9NZY2 134 aa6.43□□□□□ -1.38
CTNND1-232ENST00000532649 TRBV6-4A0A1B0GX49 114 aa6.42□□□□□ -1.38
CTNND1-232ENST00000532649 CRIP1P50238 77 aa6.42□□□□□ -1.38
CTNND1-232ENST00000532649 FAM19A3Q7Z5A8 133 aa6.42□□□□□ -1.38
CTNND1-232ENST00000532649 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
CTNND1-232ENST00000532649 SPTBN4Q9H254 2564 aa6.42□□□□□ -1.38
CTNND1-232ENST00000532649 LELP1Q5T871 98 aa6.41□□□□□ -1.38
CTNND1-232ENST00000532649 PROK1P58294 105 aa6.41□□□□□ -1.38
CTNND1-232ENST00000532649 EXPH5Q8NEV8 1989 aa6.41□□□□□ -1.38
CTNND1-232ENST00000532649 COL4A2P08572 1712 aa6.41□□□□□ -1.38
CTNND1-232ENST00000532649 LST1O00453 97 aa6.41□□□□□ -1.38
CTNND1-232ENST00000532649 C6orf99Q4VX62 202 aa6.41□□□□□ -1.38
CTNND1-232ENST00000532649 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
CTNND1-232ENST00000532649 PLA2G1BP04054 148 aaKnown RBP6.41□□□□□ -1.38
CTNND1-232ENST00000532649 NANOS2P60321 138 aaKnown RBP6.4□□□□□ -1.38
CTNND1-232ENST00000532649 TDRG1Q3Y452 100 aa6.4□□□□□ -1.38
CTNND1-232ENST00000532649 RNF185Q96GF1 192 aa6.4□□□□□ -1.38
CTNND1-232ENST00000532649 EDN2P20800 178 aa6.4□□□□□ -1.39
CTNND1-232ENST00000532649 CD164L2Q6UWJ8 174 aa6.4□□□□□ -1.39
CTNND1-232ENST00000532649 MYO9AB2RTY4 2548 aa6.4□□□□□ -1.39
CTNND1-232ENST00000532649 M0QXV9 152 aa6.4□□□□□ -1.39
CTNND1-232ENST00000532649 IGLV2-11P01706 119 aa6.4□□□□□ -1.39
CTNND1-232ENST00000532649 PRR9Q5T870 116 aa6.4□□□□□ -1.39
CTNND1-232ENST00000532649 M0QY20 66 aa6.39□□□□□ -1.39
CTNND1-232ENST00000532649 PRM2P04554 102 aa6.39□□□□□ -1.39
CTNND1-232ENST00000532649 DSCAML1Q8TD84 2053 aa6.39□□□□□ -1.39
CTNND1-232ENST00000532649 IGHV6-1A0A0B4J1U7 121 aa6.39□□□□□ -1.39
CTNND1-232ENST00000532649 LINC00308Q8TCZ7 52 aa6.39□□□□□ -1.39
CTNND1-232ENST00000532649 VPREB1P12018 145 aa6.39□□□□□ -1.39
CTNND1-232ENST00000532649 SPINK1P00995 79 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 CHD8Q9HCK8 2581 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 TRBV7-6A0A0J9YX20 115 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 KLLNB2CW77 178 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 LOC100131303A0A0U1RQF7 123 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 CDKN2A-AS1Q9UH64 79 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 UTRNP46939 3433 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 RNASE3P12724 160 aaKnown RBP6.38□□□□□ -1.39
CTNND1-232ENST00000532649 REG3GQ6UW15 175 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 LIMD2Q9BT23 127 aa6.38□□□□□ -1.39
CTNND1-232ENST00000532649 TRBV6-5A0A0K0K1A5 114 aa6.37□□□□□ -1.39
CTNND1-232ENST00000532649 JMJD1CQ15652 2540 aa6.37□□□□□ -1.39
CTNND1-232ENST00000532649 COX17Q14061 63 aa6.37□□□□□ -1.39
CTNND1-232ENST00000532649 C1orf137Q5JT78 98 aa6.37□□□□□ -1.39
CTNND1-232ENST00000532649 C1orf134Q5TEV5 83 aa6.37□□□□□ -1.39
CTNND1-232ENST00000532649 CRIP2P52943 208 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-232ENST00000532649 C11orf21Q9P2W6 132 aa6.37□□□□□ -1.39
CTNND1-232ENST00000532649 IGLV4-3A0A075B6K6 122 aa6.36□□□□□ -1.39
CTNND1-232ENST00000532649 ODF3L2Q3SX64 289 aa6.36□□□□□ -1.39
CTNND1-232ENST00000532649 Q6ZQY7 126 aa6.36□□□□□ -1.39
CTNND1-232ENST00000532649 C16orf95Q9H693 158 aa6.36□□□□□ -1.39
CTNND1-232ENST00000532649 ZFYVE26Q68DK2 2539 aa6.36□□□□□ -1.39
CTNND1-232ENST00000532649 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
CTNND1-232ENST00000532649 ZNF73O43830 326 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-232ENST00000532649 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
CTNND1-232ENST00000532649 Q6Q795 121 aa6.36□□□□□ -1.39
CTNND1-232ENST00000532649 RBX1P62877 108 aa6.35□□□□□ -1.39
CTNND1-232ENST00000532649 LINC01556Q5JQF7 62 aa6.35□□□□□ -1.39
CTNND1-232ENST00000532649 LINC00526Q96FQ7 95 aa6.35□□□□□ -1.39
CTNND1-232ENST00000532649 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-232ENST00000532649 U3KQK5 164 aa6.35□□□□□ -1.39
CTNND1-232ENST00000532649 IGLV1-51P01701 117 aa6.35□□□□□ -1.39
CTNND1-232ENST00000532649 TLN2Q9Y4G6 2542 aa6.35□□□□□ -1.39
CTNND1-232ENST00000532649 LINC00694P0DN24 101 aa6.35□□□□□ -1.39
CTNND1-232ENST00000532649 ABCA12Q86UK0 2595 aa6.35□□□□□ -1.39
CTNND1-232ENST00000532649 ZNF22P17026 224 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-232ENST00000532649 LINC00959A0A1B0GUT2 108 aa6.34□□□□□ -1.39
CTNND1-232ENST00000532649 CCDC179H3BU77 68 aa6.34□□□□□ -1.39
CTNND1-232ENST00000532649 MRPS36P82909 103 aaKnown RBP6.34□□□□□ -1.39
CTNND1-232ENST00000532649 CSDC2Q9Y534 153 aaKnown RBP6.34□□□□□ -1.39
CTNND1-232ENST00000532649 COX7CP15954 63 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms