RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 C14orf132Q9NPU4 83 aa11.09□□□□□ -0.63
PCDHA3-202ENST00000532566 LINC00242Q5T6M2 205 aa11.09□□□□□ -0.63
PCDHA3-202ENST00000532566 LINC00643Q86TS7 51 aa11.09□□□□□ -0.63
PCDHA3-202ENST00000532566 DEFB131BA0A096LNP1 70 aa11.08□□□□□ -0.64
PCDHA3-202ENST00000532566 LINC00959A0A1B0GUT2 108 aa11.08□□□□□ -0.64
PCDHA3-202ENST00000532566 POM121L12Q8N7R1 296 aa11.08□□□□□ -0.64
PCDHA3-202ENST00000532566 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
PCDHA3-202ENST00000532566 CD164L2Q6UWJ8 174 aa11.08□□□□□ -0.64
PCDHA3-202ENST00000532566 ATOX1O00244 68 aa11.07□□□□□ -0.64
PCDHA3-202ENST00000532566 FAM110AQ9BQ89 295 aa11.07□□□□□ -0.64
PCDHA3-202ENST00000532566 CHCHD7Q9BUK0 85 aa11.07□□□□□ -0.64
PCDHA3-202ENST00000532566 hADV29S1A0JD25 119 aa11.07□□□□□ -0.64
PCDHA3-202ENST00000532566 COX7BP24311 80 aa11.07□□□□□ -0.64
PCDHA3-202ENST00000532566 KIF25-AS1Q9Y6Z4 181 aa11.07□□□□□ -0.64
PCDHA3-202ENST00000532566 SMR3AQ99954 134 aa11.06□□□□□ -0.64
PCDHA3-202ENST00000532566 COL27A1Q8IZC6 1860 aaPredicted RBP11.06□□□□□ -0.64
PCDHA3-202ENST00000532566 SHISA2Q6UWI4 295 aa11.06□□□□□ -0.64
PCDHA3-202ENST00000532566 MT-ATP8P03928 68 aa11.06□□□□□ -0.64
PCDHA3-202ENST00000532566 TSPEAR-AS2P59090 65 aa11.06□□□□□ -0.64
PCDHA3-202ENST00000532566 BEAN1Q3B7T3 259 aa11.06□□□□□ -0.64
PCDHA3-202ENST00000532566 LST1O00453 97 aa11.05□□□□□ -0.64
PCDHA3-202ENST00000532566 AMELXQ99217 191 aa11.05□□□□□ -0.64
PCDHA3-202ENST00000532566 A0A1B0GX51 115 aa11.04□□□□□ -0.64
PCDHA3-202ENST00000532566 PDE6GP18545 87 aa11.04□□□□□ -0.64
PCDHA3-202ENST00000532566 BRCA2P51587 3418 aa11.04□□□□□ -0.64
PCDHA3-202ENST00000532566 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.04□□□□□ -0.64
PCDHA3-202ENST00000532566 NREPQ16612 68 aa11.03□□□□□ -0.64
PCDHA3-202ENST00000532566 LELP1Q5T871 98 aa11.03□□□□□ -0.64
PCDHA3-202ENST00000532566 C16orf95Q9H693 158 aa11.03□□□□□ -0.64
PCDHA3-202ENST00000532566 XAGE1AQ9HD64 81 aa11.03□□□□□ -0.64
PCDHA3-202ENST00000532566 SMIM1B2RUZ4 78 aa11.02□□□□□ -0.64
PCDHA3-202ENST00000532566 LINC00694P0DN24 101 aa11.01□□□□□ -0.65
PCDHA3-202ENST00000532566 C6orf99Q4VX62 202 aa11.01□□□□□ -0.65
PCDHA3-202ENST00000532566 Q6ZSN1 163 aa11.01□□□□□ -0.65
PCDHA3-202ENST00000532566 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
PCDHA3-202ENST00000532566 SLPIP03973 132 aa11.01□□□□□ -0.65
PCDHA3-202ENST00000532566 FAM19A4Q96LR4 140 aa11.01□□□□□ -0.65
PCDHA3-202ENST00000532566 LINC01546A6NGU7 62 aa11□□□□□ -0.65
PCDHA3-202ENST00000532566 SPATA25Q9BR10 227 aa11□□□□□ -0.65
PCDHA3-202ENST00000532566 KPRPQ5T749 579 aaPredicted RBP11□□□□□ -0.65
PCDHA3-202ENST00000532566 Q8N2B8 174 aa10.99□□□□□ -0.65
PCDHA3-202ENST00000532566 A0A0C4DFX4 3053 aa10.99□□□□□ -0.65
PCDHA3-202ENST00000532566 Q8IZM0 81 aa10.99□□□□□ -0.65
PCDHA3-202ENST00000532566 SS18L2Q9UHA2 77 aa10.99□□□□□ -0.65
PCDHA3-202ENST00000532566 LINC00315P59091 139 aa10.99□□□□□ -0.65
PCDHA3-202ENST00000532566 IGHV4-30-4P0DP06 118 aa10.98□□□□□ -0.65
PCDHA3-202ENST00000532566 LINC00526Q96FQ7 95 aa10.98□□□□□ -0.65
PCDHA3-202ENST00000532566 KLK9Q2XQG4 91 aa10.98□□□□□ -0.65
PCDHA3-202ENST00000532566 CLUHP3Q96NS8 147 aa10.98□□□□□ -0.65
PCDHA3-202ENST00000532566 COX6A2Q02221 97 aa10.97□□□□□ -0.65
PCDHA3-202ENST00000532566 KLK5Q9Y337 293 aaPredicted RBP10.97□□□□□ -0.65
PCDHA3-202ENST00000532566 FHL2Q14192 279 aa10.97□□□□□ -0.65
PCDHA3-202ENST00000532566 SYCNQ0VAF6 134 aa10.96□□□□□ -0.65
PCDHA3-202ENST00000532566 SMIM11BQ8TCY0 68 aa10.96□□□□□ -0.65
PCDHA3-202ENST00000532566 LAMA2P24043 3122 aaKnown RBP10.96□□□□□ -0.65
PCDHA3-202ENST00000532566 IGLV4-60A0A075B6I1 120 aa10.96□□□□□ -0.65
PCDHA3-202ENST00000532566 NDUFV3P56181 108 aaKnown RBP10.96□□□□□ -0.66
PCDHA3-202ENST00000532566 OXLD1Q5BKU9 147 aa10.96□□□□□ -0.66
PCDHA3-202ENST00000532566 A0A087WZ39 114 aa10.95□□□□□ -0.66
PCDHA3-202ENST00000532566 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
PCDHA3-202ENST00000532566 ADAMTSL4-AS1Q5T5F5 129 aa10.94□□□□□ -0.66
PCDHA3-202ENST00000532566 TRAV10A0A0B4J240 114 aa10.94□□□□□ -0.66
PCDHA3-202ENST00000532566 UBE2AP49459 152 aa10.94□□□□□ -0.66
PCDHA3-202ENST00000532566 C11orf72Q8NBR9 251 aa10.94□□□□□ -0.66
PCDHA3-202ENST00000532566 COX17Q14061 63 aa10.94□□□□□ -0.66
PCDHA3-202ENST00000532566 RNF183Q96D59 192 aa10.93□□□□□ -0.66
PCDHA3-202ENST00000532566 C14orf177Q52M58 125 aa10.92□□□□□ -0.66
PCDHA3-202ENST00000532566 MUC4Q99102 2169 aa10.92□□□□□ -0.66
PCDHA3-202ENST00000532566 MUC7Q8TAX7 377 aa10.92□□□□□ -0.66
PCDHA3-202ENST00000532566 TRAV23DV6A0A075B6W5 121 aa10.91□□□□□ -0.66
PCDHA3-202ENST00000532566 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
PCDHA3-202ENST00000532566 XGP55808 180 aa10.9□□□□□ -0.66
PCDHA3-202ENST00000532566 CYSRT1A8MQ03 144 aa10.9□□□□□ -0.67
PCDHA3-202ENST00000532566 Q6ZQY7 126 aa10.9□□□□□ -0.67
PCDHA3-202ENST00000532566 SMIM20Q8N5G0 67 aa10.89□□□□□ -0.67
PCDHA3-202ENST00000532566 PRUNE2Q8WUY3 3088 aa10.89□□□□□ -0.67
PCDHA3-202ENST00000532566 HIGD2AQ9BW72 106 aa10.88□□□□□ -0.67
PCDHA3-202ENST00000532566 ATP5EP2Q5VTU8 51 aa10.88□□□□□ -0.67
PCDHA3-202ENST00000532566 UPK3BQ9BT76 320 aa10.88□□□□□ -0.67
PCDHA3-202ENST00000532566 UNQ6190/PRO20217Q6UXQ8 127 aa10.87□□□□□ -0.67
PCDHA3-202ENST00000532566 RPL28P46779 137 aaKnown RBP10.87□□□□□ -0.67
PCDHA3-202ENST00000532566 IL17DQ8TAD2 202 aa10.87□□□□□ -0.67
PCDHA3-202ENST00000532566 M0R378 163 aa10.87□□□□□ -0.67
PCDHA3-202ENST00000532566 A0A1B0GUV1 79 aa10.86□□□□□ -0.67
PCDHA3-202ENST00000532566 BPY2O14599 106 aa10.86□□□□□ -0.67
PCDHA3-202ENST00000532566 FHL3Q13643 280 aa10.86□□□□□ -0.67
PCDHA3-202ENST00000532566 NANOS2P60321 138 aaKnown RBP10.85□□□□□ -0.67
PCDHA3-202ENST00000532566 NDUFB1O75438 58 aa10.85□□□□□ -0.67
PCDHA3-202ENST00000532566 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
PCDHA3-202ENST00000532566 A0A0J9YWU9 116 aa10.85□□□□□ -0.67
PCDHA3-202ENST00000532566 IMUPQ9GZP8 106 aa10.85□□□□□ -0.67
PCDHA3-202ENST00000532566 FSHBP01225 129 aa10.84□□□□□ -0.67
PCDHA3-202ENST00000532566 FAM19A5Q7Z5A7 132 aaPredicted RBP10.84□□□□□ -0.67
PCDHA3-202ENST00000532566 UQCRQO14949 82 aa10.83□□□□□ -0.68
PCDHA3-202ENST00000532566 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
PCDHA3-202ENST00000532566 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
PCDHA3-202ENST00000532566 C9orf116Q5BN46 136 aaPredicted RBP10.83□□□□□ -0.68
PCDHA3-202ENST00000532566 RETNQ9HD89 108 aa10.83□□□□□ -0.68
PCDHA3-202ENST00000532566 FAM240AA0A1B0GVK7 77 aa10.83□□□□□ -0.68
PCDHA3-202ENST00000532566 ZNF73O43830 326 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms