RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
NXF1-211ENST00000531709 ODF3L2Q3SX64 289 aa8.18□□□□□ -1.1
NXF1-211ENST00000531709 SMIM20Q8N5G0 67 aa8.18□□□□□ -1.1
NXF1-211ENST00000531709 TMEM86BQ8N661 226 aa8.18□□□□□ -1.1
NXF1-211ENST00000531709 BSNQ9UPA5 3926 aa8.17□□□□□ -1.1
NXF1-211ENST00000531709 MALP21145 153 aa8.17□□□□□ -1.1
NXF1-211ENST00000531709 HERV-K104P63124 156 aa8.17□□□□□ -1.1
NXF1-211ENST00000531709 CFAP46Q8IYW2 2715 aa8.17□□□□□ -1.1
NXF1-211ENST00000531709 ESM1Q9NQ30 184 aa8.17□□□□□ -1.1
NXF1-211ENST00000531709 INAFM2P0DMQ5 153 aa8.17□□□□□ -1.1
NXF1-211ENST00000531709 EDA2RQ9HAV5 297 aa8.17□□□□□ -1.1
NXF1-211ENST00000531709 UTP20O75691 2785 aaKnown RBP8.16□□□□□ -1.1
NXF1-211ENST00000531709 HIST1H4AP62805 103 aaKnown RBP8.16□□□□□ -1.1
NXF1-211ENST00000531709 SBSPONQ8IVN8 264 aa8.16□□□□□ -1.1
NXF1-211ENST00000531709 TRBV10-1A0A0K0K1A3 114 aa8.16□□□□□ -1.1
NXF1-211ENST00000531709 C9orf153Q5TBE3 101 aa8.16□□□□□ -1.1
NXF1-211ENST00000531709 SMIM1B2RUZ4 78 aa8.15□□□□□ -1.1
NXF1-211ENST00000531709 PLA2G2AP14555 144 aa8.15□□□□□ -1.1
NXF1-211ENST00000531709 C1orf158Q8N1D5 194 aa8.15□□□□□ -1.1
NXF1-211ENST00000531709 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.1
NXF1-211ENST00000531709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.15□□□□□ -1.1
NXF1-211ENST00000531709 LITAFQ99732 161 aa8.15□□□□□ -1.11
NXF1-211ENST00000531709 FASNP49327 2511 aaKnown RBP8.15□□□□□ -1.11
NXF1-211ENST00000531709 LECT2O14960 151 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 SS18Q15532 418 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 FLNAP21333 2647 aaKnown RBP8.14□□□□□ -1.11
NXF1-211ENST00000531709 IGSF10Q6WRI0 2623 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 DNAJC9-AS1A6NH13 148 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 HIST2H2BCQ6DN03 193 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 Q8N2B8 174 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 TIMM17BO60830 172 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 CDC42SE2Q9NRR3 84 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 IGKV3D-7A0A0C4DH55 119 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 WFDC11Q8NEX6 87 aa8.14□□□□□ -1.11
NXF1-211ENST00000531709 C16orf74Q96GX8 76 aa8.13□□□□□ -1.11
NXF1-211ENST00000531709 C14orf132Q9NPU4 83 aa8.13□□□□□ -1.11
NXF1-211ENST00000531709 DEFB4AO15263 64 aa8.13□□□□□ -1.11
NXF1-211ENST00000531709 GYPEP15421 78 aa8.13□□□□□ -1.11
NXF1-211ENST00000531709 SLPIP03973 132 aa8.13□□□□□ -1.11
NXF1-211ENST00000531709 CMC4P56277 68 aaPredicted RBP8.13□□□□□ -1.11
NXF1-211ENST00000531709 S100A7L2Q5SY68 101 aa8.12□□□□□ -1.11
NXF1-211ENST00000531709 ACYP1P07311 99 aa8.12□□□□□ -1.11
NXF1-211ENST00000531709 NTM-AS1Q6ZSK4 140 aa8.11□□□□□ -1.11
NXF1-211ENST00000531709 TRAV25A0A0B4J276 109 aa8.11□□□□□ -1.11
NXF1-211ENST00000531709 BEAN1Q3B7T3 259 aa8.11□□□□□ -1.11
NXF1-211ENST00000531709 ANGP03950 147 aaKnown RBP8.1□□□□□ -1.11
NXF1-211ENST00000531709 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
NXF1-211ENST00000531709 OVOL2Q9BRP0 275 aa8.1□□□□□ -1.11
NXF1-211ENST00000531709 ITPR3Q14573 2671 aa8.09□□□□□ -1.11
NXF1-211ENST00000531709 IGLV4-60A0A075B6I1 120 aa8.09□□□□□ -1.11
NXF1-211ENST00000531709 LINC00643Q86TS7 51 aa8.09□□□□□ -1.12
NXF1-211ENST00000531709 SDIM1Q6ZPB5 146 aa8.08□□□□□ -1.12
NXF1-211ENST00000531709 NBEAL2Q6ZNJ1 2754 aa8.08□□□□□ -1.12
NXF1-211ENST00000531709 TRBV6-8A0A0A6YYG3 113 aa8.08□□□□□ -1.12
NXF1-211ENST00000531709 TRACP01848 142 aa8.08□□□□□ -1.12
NXF1-211ENST00000531709 FBN2P35556 2912 aa8.08□□□□□ -1.12
NXF1-211ENST00000531709 SMIM11BQ8TCY0 68 aa8.08□□□□□ -1.12
NXF1-211ENST00000531709 LAMTOR3Q9UHA4 124 aa8.08□□□□□ -1.12
NXF1-211ENST00000531709 NCR3O14931 201 aa8.07□□□□□ -1.12
NXF1-211ENST00000531709 CELSR2Q9HCU4 2923 aa8.07□□□□□ -1.12
NXF1-211ENST00000531709 NF1P21359 2839 aa8.07□□□□□ -1.12
NXF1-211ENST00000531709 M0QXV9 152 aa8.07□□□□□ -1.12
NXF1-211ENST00000531709 H0YGX0 51 aa8.07□□□□□ -1.12
NXF1-211ENST00000531709 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
NXF1-211ENST00000531709 F5H768 121 aa8.06□□□□□ -1.12
NXF1-211ENST00000531709 CCL18P55774 89 aa8.06□□□□□ -1.12
NXF1-211ENST00000531709 FAM104AQ969W3 186 aa8.06□□□□□ -1.12
NXF1-211ENST00000531709 GCN1Q92616 2671 aaKnown RBP8.06□□□□□ -1.12
NXF1-211ENST00000531709 ORMDL1Q9P0S3 153 aa8.06□□□□□ -1.12
NXF1-211ENST00000531709 TRBV6-4A0A1B0GX49 114 aa8.05□□□□□ -1.12
NXF1-211ENST00000531709 LINC00337Q8N6G1 96 aa8.05□□□□□ -1.12
NXF1-211ENST00000531709 FAM218AQ96MZ4 157 aa8.05□□□□□ -1.12
NXF1-211ENST00000531709 MRPL23Q16540 153 aaKnown RBP8.05□□□□□ -1.12
NXF1-211ENST00000531709 LINC01006Q8NI28 216 aa8.05□□□□□ -1.12
NXF1-211ENST00000531709 A0A087WYN8 130 aa8.04□□□□□ -1.12
NXF1-211ENST00000531709 Q6Q795 121 aa8.04□□□□□ -1.12
NXF1-211ENST00000531709 PRR3P79522 188 aaKnown RBP8.04□□□□□ -1.12
NXF1-211ENST00000531709 LINC00269Q8N2A0 174 aa8.04□□□□□ -1.12
NXF1-211ENST00000531709 IGLV5-45A0A087WSX0 123 aa8.04□□□□□ -1.12
NXF1-211ENST00000531709 FAM240AA0A1B0GVK7 77 aa8.04□□□□□ -1.12
NXF1-211ENST00000531709 DAD1P61803 113 aa8.04□□□□□ -1.12
NXF1-211ENST00000531709 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
NXF1-211ENST00000531709 A0A1B0GX51 115 aa8.03□□□□□ -1.12
NXF1-211ENST00000531709 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
NXF1-211ENST00000531709 NHLRC4P0CG21 123 aaPredicted RBP8.03□□□□□ -1.12
NXF1-211ENST00000531709 DEFB135Q30KP9 77 aa8.03□□□□□ -1.12
NXF1-211ENST00000531709 IBA57-AS1B1ANH7 110 aa8.02□□□□□ -1.13
NXF1-211ENST00000531709 LINC00526Q96FQ7 95 aa8.02□□□□□ -1.13
NXF1-211ENST00000531709 LINC00959A0A1B0GUT2 108 aa8.02□□□□□ -1.13
NXF1-211ENST00000531709 LINC00482Q8N8I6 264 aa8.02□□□□□ -1.13
NXF1-211ENST00000531709 BBC3Q96PG8 261 aaPredicted RBP8.02□□□□□ -1.13
NXF1-211ENST00000531709 SHISA2Q6UWI4 295 aa8.01□□□□□ -1.13
NXF1-211ENST00000531709 RPL28P46779 137 aaKnown RBP8□□□□□ -1.13
NXF1-211ENST00000531709 HAMPP81172 84 aa8□□□□□ -1.13
NXF1-211ENST00000531709 FAM222AQ5U5X8 452 aa8□□□□□ -1.13
NXF1-211ENST00000531709 PRO0255Q9UI72 69 aa8□□□□□ -1.13
NXF1-211ENST00000531709 ZNF843Q8N446 348 aa8□□□□□ -1.13
NXF1-211ENST00000531709 FHL2Q14192 279 aa7.99□□□□□ -1.13
NXF1-211ENST00000531709 C9orf116Q5BN46 136 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms