RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 C10orf113Q5VZT2 155 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 DPH3Q96FX2 82 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 DNAH3Q8TD57 4116 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 PKD1P98161 4303 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 DNHD1Q96M86 4753 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 WDR87Q6ZQQ6 2873 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 VPS13DQ5THJ4 4388 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 ANK3Q12955 4377 aaKnown RBP-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 LAMA1P25391 3075 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 URB1O60287 2271 aaKnown RBP-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 HMGN4O00479 90 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 MGPP08493 103 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 RPS25P62851 125 aaKnown RBP-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 Q8N8P6 123 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 TCEAL4Q96EI5 215 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 PDCD10Q9BUL8 212 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 FAIMQ9NVQ4 179 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 ANKRD30AQ9BXX3 1397 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 MYH13Q9UKX3 1938 aa-0.88□□□□□ -2.55
RC3H1-206ENST00000531594 PRG4Q92954 1404 aaPredicted RBP-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 ARHGEF12Q9NZN5 1544 aa-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 LOC285095A0A1B0GVY8 99 aa-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 MT1AP04731 61 aa-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 MRPL54Q6P161 138 aaKnown RBP-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 AKAP14Q86UN6 197 aa-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 TMEM191AQ9H0A3 160 aa-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 CDK5RAP2Q96SN8 1893 aa-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 ARAP2Q8WZ64 1704 aa-0.89□□□□□ -2.55
RC3H1-206ENST00000531594 KIF21AQ7Z4S6 1674 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 IGLC1P0CG04 106 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 H1FX-AS1Q4G0G2 97 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 C12orf73Q69YU5 71 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 LSM10Q969L4 123 aaKnown RBP-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 LINC01600Q96MT4 127 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 NAA60Q9H7X0 242 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 NXT2Q9NPJ8 142 aaKnown RBP-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 CRIPTQ9P021 101 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 CCDC167Q9P0B6 97 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 COPZ2Q9P299 210 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 PRRC2CQ9Y520 2896 aaKnown RBP-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 HTTP42858 3142 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 NWD2Q9ULI1 1742 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 HMGXB3Q12766 1538 aa-0.9□□□□□ -2.55
RC3H1-206ENST00000531594 CHKB-CPT1BH3BT56 60 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 B2MP61769 119 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 MT1HP80294 61 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 C9orf62Q8N4C0 152 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 PYDC1Q8WXC3 89 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 COPS9Q8WXC6 57 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 ANKRD11Q6UB99 2663 aaPredicted RBP-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 DOCK1Q14185 1865 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 FHAD1B1AJZ9 1412 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 SETBP1Q9Y6X0 1596 aa-0.91□□□□□ -2.56
RC3H1-206ENST00000531594 SPTBN4Q9H254 2564 aa-0.92□□□□□ -2.56
RC3H1-206ENST00000531594 LCN9Q8WX39 176 aa-0.92□□□□□ -2.56
RC3H1-206ENST00000531594 SPRR4Q96PI1 79 aa-0.92□□□□□ -2.56
RC3H1-206ENST00000531594 SERP1Q9Y6X1 66 aa-0.92□□□□□ -2.56
RC3H1-206ENST00000531594 ARL2-SNX15V9GYD0 113 aa-0.92□□□□□ -2.56
RC3H1-206ENST00000531594 KDM5AP29375 1690 aaKnown RBP-0.92□□□□□ -2.56
RC3H1-206ENST00000531594 SBF2Q86WG5 1849 aa-0.92□□□□□ -2.56
RC3H1-206ENST00000531594 COL12A1Q99715 3063 aa-0.92□□□□□ -2.56
RC3H1-206ENST00000531594 TULP4Q9NRJ4 1543 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 DNAH9Q9NYC9 4486 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 SSSCA1O60232 199 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 WHAMMP3Q1A5X7 153 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 ANP32BQ92688 251 aaKnown RBP-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 PPP3R2Q96LZ3 170 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 SPANXDQ9BXN6 97 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 PRO1933Q9H354 126 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 MYH8P13535 1937 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 DNAJC13O75165 2243 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 GOLGA4Q13439 2230 aaKnown RBP-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 AKAP13Q12802 2813 aa-0.93□□□□□ -2.56
RC3H1-206ENST00000531594 MYOM3Q5VTT5 1437 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 H0YGG7 62 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 MT1HL1P0DM35 61 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 ARPC4P59998 168 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 UBE2D3P61077 147 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 UBE2D2P62837 147 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 SEC11AP67812 179 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 SMIM21Q3B7S5 101 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 FAM223AQ8IWN6 122 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 MYOZ3Q8TDC0 251 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 RERGLQ9H628 205 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 LINC00474Q9P2X8 69 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 UQCR10Q9UDW1 63 aa-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 DYNC1H1Q14204 4646 aaKnown RBP-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 RIMS1Q86UR5 1692 aaKnown RBP-0.94□□□□□ -2.56
RC3H1-206ENST00000531594 FAM25AB3EWG3 89 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 FAM25CB3EWG5 89 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 FAM25GB3EWG6 89 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 I3L3M4 83 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 MEIG1Q5JSS6 88 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 FAM167A-AS1Q96KT0 104 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 PFDN5Q99471 154 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 TEX15Q9BXT5 2789 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 MYH6P13533 1939 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 ZFHX3Q15911 3703 aa-0.95□□□□□ -2.56
RC3H1-206ENST00000531594 RAPGEF6Q8TEU7 1601 aa-0.96□□□□□ -2.56
RC3H1-206ENST00000531594 MAGI1Q96QZ7 1491 aaPredicted RBP-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms