RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 TMEM141Q96I45 108 aa11.62□□□□□ -0.55
PTPN11-204ENST00000531326 TRAV13-1A0A0B4J241 112 aa11.61□□□□□ -0.55
PTPN11-204ENST00000531326 CCL25O15444 150 aa11.61□□□□□ -0.55
PTPN11-204ENST00000531326 NPSP0C0P6 89 aa11.61□□□□□ -0.55
PTPN11-204ENST00000531326 SS18Q15532 418 aa11.61□□□□□ -0.55
PTPN11-204ENST00000531326 TIMM17AQ99595 171 aa11.61□□□□□ -0.55
PTPN11-204ENST00000531326 XCL1P47992 114 aa11.6□□□□□ -0.55
PTPN11-204ENST00000531326 FOXI1Q12951 378 aa11.6□□□□□ -0.55
PTPN11-204ENST00000531326 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
PTPN11-204ENST00000531326 LINC00173Q6ZV60 143 aa11.6□□□□□ -0.55
PTPN11-204ENST00000531326 ERASQ7Z444 233 aa11.6□□□□□ -0.55
PTPN11-204ENST00000531326 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
PTPN11-204ENST00000531326 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
PTPN11-204ENST00000531326 FAT3Q8TDW7 4589 aa11.6□□□□□ -0.55
PTPN11-204ENST00000531326 LINC01549A6NIU2 74 aa11.59□□□□□ -0.55
PTPN11-204ENST00000531326 C1orf196B1AJZ1 125 aa11.59□□□□□ -0.55
PTPN11-204ENST00000531326 USP17L23D6RBM5 183 aa11.59□□□□□ -0.55
PTPN11-204ENST00000531326 ZC2HC1BQ5TFG8 222 aa11.59□□□□□ -0.55
PTPN11-204ENST00000531326 SCGB3A1Q96QR1 104 aa11.59□□□□□ -0.55
PTPN11-204ENST00000531326 AMELXQ99217 191 aa11.59□□□□□ -0.55
PTPN11-204ENST00000531326 HMCN2Q8NDA2 5059 aa11.58□□□□□ -0.55
PTPN11-204ENST00000531326 IFITM10A6NMD0 228 aa11.58□□□□□ -0.56
PTPN11-204ENST00000531326 LINC00310P59036 64 aa11.58□□□□□ -0.56
PTPN11-204ENST00000531326 CD164L2Q6UWJ8 174 aa11.58□□□□□ -0.56
PTPN11-204ENST00000531326 TEX43Q6ZNM6 134 aa11.58□□□□□ -0.56
PTPN11-204ENST00000531326 BAGE3Q86Y29 109 aa11.58□□□□□ -0.56
PTPN11-204ENST00000531326 CIRBP-AS1Q8TBR5 109 aa11.58□□□□□ -0.56
PTPN11-204ENST00000531326 HBDP02042 147 aa11.57□□□□□ -0.56
PTPN11-204ENST00000531326 Q6ZN92 141 aa11.57□□□□□ -0.56
PTPN11-204ENST00000531326 VCX2Q9H322 139 aa11.57□□□□□ -0.56
PTPN11-204ENST00000531326 PDZD11Q5EBL8 140 aa11.56□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BKO60814 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BJP06899 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BOP23527 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BBP33778 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 UBE2D1P51668 147 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BDP58876 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BCP62807 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST2H2BEQ16778 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.55□□□□□ -0.56
PTPN11-204ENST00000531326 C15orf56Q8N910 161 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BHQ93079 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BNQ99877 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 HIST1H2BMQ99879 126 aa11.55□□□□□ -0.56
PTPN11-204ENST00000531326 SERF1AO75920 110 aa11.54□□□□□ -0.56
PTPN11-204ENST00000531326 C14orf177Q52M58 125 aa11.54□□□□□ -0.56
PTPN11-204ENST00000531326 PAPPA-AS1Q5QFB9 102 aa11.54□□□□□ -0.56
PTPN11-204ENST00000531326 C2orf88Q9BSF0 95 aa11.54□□□□□ -0.56
PTPN11-204ENST00000531326 NUPR1O60356 82 aa11.53□□□□□ -0.56
PTPN11-204ENST00000531326 PRSS1P07477 247 aa11.53□□□□□ -0.56
PTPN11-204ENST00000531326 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
PTPN11-204ENST00000531326 PKHD1L1Q86WI1 4243 aa11.52□□□□□ -0.56
PTPN11-204ENST00000531326 IGHV3OR16-9A0A0B4J2B5 98 aa11.52□□□□□ -0.57
PTPN11-204ENST00000531326 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.52□□□□□ -0.57
PTPN11-204ENST00000531326 HSBP1O75506 76 aa11.52□□□□□ -0.57
PTPN11-204ENST00000531326 COX6A2Q02221 97 aa11.52□□□□□ -0.57
PTPN11-204ENST00000531326 FAM19A3Q7Z5A8 133 aa11.52□□□□□ -0.57
PTPN11-204ENST00000531326 FAM19A2Q8N3H0 131 aa11.52□□□□□ -0.57
PTPN11-204ENST00000531326 COX7A2LO14548 114 aa11.51□□□□□ -0.57
PTPN11-204ENST00000531326 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
PTPN11-204ENST00000531326 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
PTPN11-204ENST00000531326 OXTP01178 125 aa11.5□□□□□ -0.57
PTPN11-204ENST00000531326 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
PTPN11-204ENST00000531326 CST9LQ9H4G1 147 aa11.5□□□□□ -0.57
PTPN11-204ENST00000531326 IGHV1-58A0A0C4DH39 117 aa11.49□□□□□ -0.57
PTPN11-204ENST00000531326 ATP5LO75964 103 aa11.49□□□□□ -0.57
PTPN11-204ENST00000531326 PMVKQ15126 192 aa11.49□□□□□ -0.57
PTPN11-204ENST00000531326 UBR4Q5T4S7 5183 aa11.48□□□□□ -0.57
PTPN11-204ENST00000531326 GVQW2A0A096LPI5 108 aaPredicted RBP11.48□□□□□ -0.57
PTPN11-204ENST00000531326 hDV102S1A0JD36 115 aa11.48□□□□□ -0.57
PTPN11-204ENST00000531326 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
PTPN11-204ENST00000531326 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
PTPN11-204ENST00000531326 SLPIP03973 132 aa11.47□□□□□ -0.57
PTPN11-204ENST00000531326 MALP21145 153 aa11.47□□□□□ -0.57
PTPN11-204ENST00000531326 A0A087WZ39 114 aa11.46□□□□□ -0.57
PTPN11-204ENST00000531326 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.57
PTPN11-204ENST00000531326 CNBPP62633 177 aaKnown RBP11.45□□□□□ -0.58
PTPN11-204ENST00000531326 SEC11AP67812 179 aa11.45□□□□□ -0.58
PTPN11-204ENST00000531326 IFI27L1Q96BM0 104 aa11.45□□□□□ -0.58
PTPN11-204ENST00000531326 TINCRA0A1B0GVN0 87 aa11.44□□□□□ -0.58
PTPN11-204ENST00000531326 NDUFA6P56556 154 aa11.44□□□□□ -0.58
PTPN11-204ENST00000531326 RPL37AP61513 92 aaKnown RBP11.44□□□□□ -0.58
PTPN11-204ENST00000531326 HERVK_113P63121 156 aa11.44□□□□□ -0.58
PTPN11-204ENST00000531326 COA6Q5JTJ3 125 aaKnown RBP11.44□□□□□ -0.58
PTPN11-204ENST00000531326 LINC00526Q96FQ7 95 aa11.44□□□□□ -0.58
PTPN11-204ENST00000531326 IGHV3-64A0A075B6Q5 118 aa11.43□□□□□ -0.58
PTPN11-204ENST00000531326 APOMO95445 188 aa11.43□□□□□ -0.58
PTPN11-204ENST00000531326 GEMIN7Q9H840 131 aaKnown RBP11.43□□□□□ -0.58
PTPN11-204ENST00000531326 CDKN2A-AS1Q9UH64 79 aa11.43□□□□□ -0.58
PTPN11-204ENST00000531326 IGLV4-69A0A075B6H9 119 aa11.42□□□□□ -0.58
PTPN11-204ENST00000531326 IGLV5-45A0A087WSX0 123 aa11.42□□□□□ -0.58
PTPN11-204ENST00000531326 PANO1I0J062 215 aa11.42□□□□□ -0.58
PTPN11-204ENST00000531326 LEPROTL1O95214 131 aa11.42□□□□□ -0.58
PTPN11-204ENST00000531326 IGLC3P0DOY3 106 aa11.42□□□□□ -0.58
PTPN11-204ENST00000531326 LINC01561Q8N1V8 128 aa11.42□□□□□ -0.58
PTPN11-204ENST00000531326 C9orf163Q8N9P6 203 aa11.42□□□□□ -0.58
PTPN11-204ENST00000531326 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.42□□□□□ -0.58
PTPN11-204ENST00000531326 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
PTPN11-204ENST00000531326 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
PTPN11-204ENST00000531326 TRAV12-1A0A0B4J245 112 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms