RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 PAM16Q9Y3D7 125 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 SS18Q15532 418 aa6.75□□□□□ -1.33
CTNND1-228ENST00000531007 MPV17L2Q567V2 206 aa6.75□□□□□ -1.33
CTNND1-228ENST00000531007 LINC01556Q5JQF7 62 aa6.75□□□□□ -1.33
CTNND1-228ENST00000531007 CDIP1Q9H305 208 aa6.75□□□□□ -1.33
CTNND1-228ENST00000531007 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
CTNND1-228ENST00000531007 TRAV8-4A0A0B4J246 113 aa6.74□□□□□ -1.33
CTNND1-228ENST00000531007 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
CTNND1-228ENST00000531007 hDV102S1A0JD36 115 aa6.74□□□□□ -1.33
CTNND1-228ENST00000531007 E9PLD3 99 aa6.74□□□□□ -1.33
CTNND1-228ENST00000531007 DLEU1O43261 78 aa6.74□□□□□ -1.33
CTNND1-228ENST00000531007 TMEM170BQ5T4T1 132 aa6.74□□□□□ -1.33
CTNND1-228ENST00000531007 LINC01561Q8N1V8 128 aa6.74□□□□□ -1.33
CTNND1-228ENST00000531007 TRAV13-1A0A0B4J241 112 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 TMEM223A0PJW6 202 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 ANGP03950 147 aaKnown RBP6.73□□□□□ -1.33
CTNND1-228ENST00000531007 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 LINC00242Q5T6M2 205 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 PRR34Q9NV39 138 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 UQCR10Q9UDW1 63 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 COL7A1Q02388 2944 aa6.73□□□□□ -1.33
CTNND1-228ENST00000531007 LINC00959A0A1B0GUT2 108 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 CRPP02741 224 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 COX8AP10176 69 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-228ENST00000531007 REG3AQ06141 175 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 MIAQ16674 131 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 RNASE13Q5GAN3 156 aaKnown RBP6.72□□□□□ -1.33
CTNND1-228ENST00000531007 C10orf126Q8N4M7 172 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 LINC00469Q8N7U9 141 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 STPG4Q8N801 248 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 PLEKHB2Q96CS7 222 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 MIEN1Q9BRT3 115 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 APLNQ9ULZ1 77 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 STAB2Q8WWQ8 2551 aa6.72□□□□□ -1.33
CTNND1-228ENST00000531007 SIVA1O15304 175 aa6.71□□□□□ -1.34
CTNND1-228ENST00000531007 SLC25A34Q6PIV7 304 aa6.71□□□□□ -1.34
CTNND1-228ENST00000531007 CD164L2Q6UWJ8 174 aa6.71□□□□□ -1.34
CTNND1-228ENST00000531007 LINC00269Q8N2A0 174 aa6.71□□□□□ -1.34
CTNND1-228ENST00000531007 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.34
CTNND1-228ENST00000531007 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
CTNND1-228ENST00000531007 C9orf118A6NHY6 69 aa6.7□□□□□ -1.34
CTNND1-228ENST00000531007 LEPROTO15243 131 aa6.7□□□□□ -1.34
CTNND1-228ENST00000531007 NMUP48645 174 aa6.7□□□□□ -1.34
CTNND1-228ENST00000531007 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
CTNND1-228ENST00000531007 SFTA2Q6UW10 78 aa6.7□□□□□ -1.34
CTNND1-228ENST00000531007 WFDC10BQ8IUB3 73 aa6.7□□□□□ -1.34
CTNND1-228ENST00000531007 BOD1L2Q8IYS8 172 aa6.7□□□□□ -1.34
CTNND1-228ENST00000531007 DNAH7Q8WXX0 4024 aa6.69□□□□□ -1.34
CTNND1-228ENST00000531007 A0A087WZ39 114 aa6.69□□□□□ -1.34
CTNND1-228ENST00000531007 TRAV8-3A0A0A6YYJ7 113 aa6.69□□□□□ -1.34
CTNND1-228ENST00000531007 IGHV3OR16-9A0A0B4J2B5 98 aa6.69□□□□□ -1.34
CTNND1-228ENST00000531007 WWC2-AS2Q96NR7 200 aa6.69□□□□□ -1.34
CTNND1-228ENST00000531007 CDKN2A-AS1Q9UH64 79 aa6.69□□□□□ -1.34
CTNND1-228ENST00000531007 KLK12Q9UKR0 248 aa6.69□□□□□ -1.34
CTNND1-228ENST00000531007 DYNC2H1Q8NCM8 4307 aaKnown RBP6.69□□□□□ -1.34
CTNND1-228ENST00000531007 J3QQQ9 107 aa6.68□□□□□ -1.34
CTNND1-228ENST00000531007 LGALS3P17931 250 aaKnown RBP6.68□□□□□ -1.34
CTNND1-228ENST00000531007 DDTP30046 118 aa6.68□□□□□ -1.34
CTNND1-228ENST00000531007 COX6A2Q02221 97 aa6.68□□□□□ -1.34
CTNND1-228ENST00000531007 RMI2Q96E14 147 aa6.68□□□□□ -1.34
CTNND1-228ENST00000531007 C14orf144Q96I85 54 aa6.68□□□□□ -1.34
CTNND1-228ENST00000531007 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
CTNND1-228ENST00000531007 PRO1933Q9H354 126 aa6.68□□□□□ -1.34
CTNND1-228ENST00000531007 IGLV5-39A0A0G2JS06 123 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 MYMXA0A1B0GTQ4 84 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 COX7A2LO14548 114 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 APOMO95445 188 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 IGHV3-30P01768 117 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 IGHV3-33P01772 117 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 IGHV3-30-3P0DP02 117 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 IGHV3-30-5P0DP03 117 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 ENHOQ6UWT2 76 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 UBE2DNLQ8IWF7 75 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 MUC7Q8TAX7 377 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 CHCHD10Q8WYQ3 142 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-228ENST00000531007 Q9H8V8 135 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 HIGD1BQ9P298 99 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
CTNND1-228ENST00000531007 IGKV2D-26A0A0A0MRZ7 120 aa6.66□□□□□ -1.34
CTNND1-228ENST00000531007 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
CTNND1-228ENST00000531007 IBA57-AS1B1ANH7 110 aa6.66□□□□□ -1.34
CTNND1-228ENST00000531007 SMIM1B2RUZ4 78 aa6.66□□□□□ -1.34
CTNND1-228ENST00000531007 HNRNPA3P51991 378 aaKnown RBP6.66□□□□□ -1.34
CTNND1-228ENST00000531007 TTC32Q5I0X7 151 aa6.66□□□□□ -1.34
CTNND1-228ENST00000531007 ZFAND6Q6FIF0 208 aa6.66□□□□□ -1.34
CTNND1-228ENST00000531007 UBE2WQ96B02 151 aa6.66□□□□□ -1.34
CTNND1-228ENST00000531007 ZNF815PA8K554 130 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 LINC00587B1AMM8 73 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 C3orf84H3BNL1 204 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 SPINK8P0C7L1 97 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 MALP21145 153 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 XCL1P47992 114 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 HERV-K104P63124 156 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 C1orf43Q9BWL3 253 aa6.65□□□□□ -1.34
CTNND1-228ENST00000531007 F8WDY8 70 aa6.64□□□□□ -1.35
CTNND1-228ENST00000531007 GCSHP23434 173 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms