RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
LTBP3-219ENST00000530990 IGHV3OR16-9A0A0B4J2B5 98 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 NPSP0C0P6 89 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 G0S2P27469 103 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 UBE2D1P51668 147 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 LINC00242Q5T6M2 205 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 Q8N1X5 172 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 TIMM17AQ99595 171 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 C2orf88Q9BSF0 95 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 KRTAP4-5Q9BYR2 181 aa7.65□□□□□ -1.18
LTBP3-219ENST00000530990 FAT1Q14517 4588 aa7.64□□□□□ -1.19
LTBP3-219ENST00000530990 SCXQ7RTU7 201 aa7.64□□□□□ -1.19
LTBP3-219ENST00000530990 VCX2Q9H322 139 aa7.64□□□□□ -1.19
LTBP3-219ENST00000530990 IGHV3-64A0A075B6Q5 118 aa7.63□□□□□ -1.19
LTBP3-219ENST00000530990 A0A096LNJ9 63 aa7.63□□□□□ -1.19
LTBP3-219ENST00000530990 ZNF561-AS1K7EIQ3 104 aa7.63□□□□□ -1.19
LTBP3-219ENST00000530990 SMR3BP02814 79 aaPredicted RBP7.63□□□□□ -1.19
LTBP3-219ENST00000530990 COX6A2Q02221 97 aa7.63□□□□□ -1.19
LTBP3-219ENST00000530990 SDIM1Q6ZPB5 146 aa7.63□□□□□ -1.19
LTBP3-219ENST00000530990 ERASQ7Z444 233 aa7.63□□□□□ -1.19
LTBP3-219ENST00000530990 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
LTBP3-219ENST00000530990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.63□□□□□ -1.19
LTBP3-219ENST00000530990 IGLV4-69A0A075B6H9 119 aa7.62□□□□□ -1.19
LTBP3-219ENST00000530990 LINC01549A6NIU2 74 aa7.62□□□□□ -1.19
LTBP3-219ENST00000530990 PANO1I0J062 215 aa7.62□□□□□ -1.19
LTBP3-219ENST00000530990 APOMO95445 188 aa7.62□□□□□ -1.19
LTBP3-219ENST00000530990 LINC00614P0C842 121 aa7.62□□□□□ -1.19
LTBP3-219ENST00000530990 SPAG11BQ08648 103 aa7.62□□□□□ -1.19
LTBP3-219ENST00000530990 PAPPA-AS1Q5QFB9 102 aa7.62□□□□□ -1.19
LTBP3-219ENST00000530990 PMCHL1Q16048 86 aa7.61□□□□□ -1.19
LTBP3-219ENST00000530990 CIRBP-AS1Q8TBR5 109 aa7.61□□□□□ -1.19
LTBP3-219ENST00000530990 ORAOV1Q8WV07 137 aa7.61□□□□□ -1.19
LTBP3-219ENST00000530990 CARD19Q96LW7 228 aa7.61□□□□□ -1.19
LTBP3-219ENST00000530990 CHAC1Q9BUX1 264 aa7.61□□□□□ -1.19
LTBP3-219ENST00000530990 A0A087WZ39 114 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 COLCA2A8K830 154 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 SCO1O75880 301 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 HBDP02042 147 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 TRGC2P03986 189 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 CHTF8P0CG12 524 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 SYCNQ0VAF6 134 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 Q5VSD8 79 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 Q6ZRU5 148 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 FAM19A3Q7Z5A8 133 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 OR10D4PQ8NGN7 298 aa7.6□□□□□ -1.19
LTBP3-219ENST00000530990 EPM2AB3EWF7 344 aa7.59□□□□□ -1.19
LTBP3-219ENST00000530990 RAB5BP61020 215 aa7.59□□□□□ -1.19
LTBP3-219ENST00000530990 CIRBPQ14011 172 aaKnown RBP7.59□□□□□ -1.19
LTBP3-219ENST00000530990 CAMK2N2Q96S95 79 aa7.59□□□□□ -1.19
LTBP3-219ENST00000530990 A0A0J9YXV3 536 aa7.58□□□□□ -1.2
LTBP3-219ENST00000530990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.58□□□□□ -1.2
LTBP3-219ENST00000530990 SPACA4Q8TDM5 124 aa7.58□□□□□ -1.2
LTBP3-219ENST00000530990 C2orf48Q96LS8 159 aa7.58□□□□□ -1.2
LTBP3-219ENST00000530990 A0A096LNI7 61 aa7.57□□□□□ -1.2
LTBP3-219ENST00000530990 IGKV2-24A0A0C4DH68 120 aa7.57□□□□□ -1.2
LTBP3-219ENST00000530990 HERVK_113P63121 156 aa7.57□□□□□ -1.2
LTBP3-219ENST00000530990 SEC11AP67812 179 aa7.57□□□□□ -1.2
LTBP3-219ENST00000530990 PDZD11Q5EBL8 140 aa7.57□□□□□ -1.2
LTBP3-219ENST00000530990 LINC00528Q8N1L1 170 aa7.57□□□□□ -1.2
LTBP3-219ENST00000530990 CHCHD1Q96BP2 118 aaKnown RBP7.57□□□□□ -1.2
LTBP3-219ENST00000530990 CST9LQ9H4G1 147 aa7.57□□□□□ -1.2
LTBP3-219ENST00000530990 CDKN2A-AS1Q9UH64 79 aa7.57□□□□□ -1.2
LTBP3-219ENST00000530990 PMVKQ15126 192 aa7.56□□□□□ -1.2
LTBP3-219ENST00000530990 LINC01561Q8N1V8 128 aa7.56□□□□□ -1.2
LTBP3-219ENST00000530990 GEMIN7Q9H840 131 aaKnown RBP7.56□□□□□ -1.2
LTBP3-219ENST00000530990 TINCRA0A1B0GVN0 87 aa7.55□□□□□ -1.2
LTBP3-219ENST00000530990 KIAA0087Q14695 138 aa7.55□□□□□ -1.2
LTBP3-219ENST00000530990 C10orf25Q5T742 122 aa7.55□□□□□ -1.2
LTBP3-219ENST00000530990 BAGE3Q86Y29 109 aa7.55□□□□□ -1.2
LTBP3-219ENST00000530990 LINC00469Q8N7U9 141 aa7.55□□□□□ -1.2
LTBP3-219ENST00000530990 IGLV5-45A0A087WSX0 123 aa7.54□□□□□ -1.2
LTBP3-219ENST00000530990 A0A087WYN8 130 aa7.54□□□□□ -1.2
LTBP3-219ENST00000530990 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
LTBP3-219ENST00000530990 NDUFA1O15239 70 aa7.54□□□□□ -1.2
LTBP3-219ENST00000530990 LINC00310P59036 64 aa7.54□□□□□ -1.2
LTBP3-219ENST00000530990 MAJINQ3KP22 176 aa7.54□□□□□ -1.2
LTBP3-219ENST00000530990 C2orf82Q6UX34 121 aa7.54□□□□□ -1.2
LTBP3-219ENST00000530990 PACRGQ96M98 296 aaPredicted RBP7.54□□□□□ -1.2
LTBP3-219ENST00000530990 PKIGQ9Y2B9 76 aa7.54□□□□□ -1.2
LTBP3-219ENST00000530990 LOC107984640A0A0U1RRK4 108 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 SMIM1B2RUZ4 78 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 F8WDY8 70 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 HSBP1O75506 76 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 SERF1AO75920 110 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 ATP5LO75964 103 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 NDUFA6P56556 154 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 UNQ6190/PRO20217Q6UXQ8 127 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
LTBP3-219ENST00000530990 TOMM7Q9P0U1 55 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 C6orf48Q9UBA6 75 aa7.53□□□□□ -1.2
LTBP3-219ENST00000530990 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
LTBP3-219ENST00000530990 PRSS2P07478 247 aa7.52□□□□□ -1.21
LTBP3-219ENST00000530990 IGLC3P0DOY3 106 aa7.52□□□□□ -1.21
LTBP3-219ENST00000530990 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
LTBP3-219ENST00000530990 RPL18AQ02543 176 aaKnown RBP7.52□□□□□ -1.21
LTBP3-219ENST00000530990 GAGE2BQ13066 116 aa7.52□□□□□ -1.21
LTBP3-219ENST00000530990 RNF151Q2KHN1 245 aa7.52□□□□□ -1.21
LTBP3-219ENST00000530990 Q8IZM0 81 aa7.52□□□□□ -1.21
LTBP3-219ENST00000530990 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
LTBP3-219ENST00000530990 DPH3Q96FX2 82 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 301.3 ms