RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 IFITM2Q01629 132 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 CIRBPQ14011 172 aaKnown RBP4.03□□□□□ -1.76
CSDE1-213ENST00000530784 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 BAGE2Q86Y30 109 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 KCNRGQ8N5I3 272 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 DPH3Q96FX2 82 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 IGHV3-64A0A075B6Q5 118 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 TRAV8-4A0A0B4J246 113 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 A0A1B0GV50 99 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 P01737 135 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 FAM213BQ8TBF2 198 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 SFT2D1Q8WV19 159 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 RNF185Q96GF1 192 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 TMEM243Q9BU79 118 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 CYTL1Q9NRR1 136 aa4.02□□□□□ -1.77
CSDE1-213ENST00000530784 UMAD1C9J7I0 102 aa4.01□□□□□ -1.77
CSDE1-213ENST00000530784 M0QY20 66 aa4.01□□□□□ -1.77
CSDE1-213ENST00000530784 CHTF8P0CG12 524 aa4.01□□□□□ -1.77
CSDE1-213ENST00000530784 GZMBP10144 247 aa4.01□□□□□ -1.77
CSDE1-213ENST00000530784 SULT1A2P50226 295 aa4.01□□□□□ -1.77
CSDE1-213ENST00000530784 FER1L6-AS1Q8NA97 138 aa4.01□□□□□ -1.77
CSDE1-213ENST00000530784 SPACA4Q8TDM5 124 aa4.01□□□□□ -1.77
CSDE1-213ENST00000530784 DPH3P1Q9H4G8 78 aa4.01□□□□□ -1.77
CSDE1-213ENST00000530784 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 IGLV4-60A0A075B6I1 120 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 KRTAP4-16G5E9R7 235 aaPredicted RBP4□□□□□ -1.77
CSDE1-213ENST00000530784 UBE2L6O14933 153 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 IGLC6P0CF74 106 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 RPL35P42766 123 aaKnown RBP4□□□□□ -1.77
CSDE1-213ENST00000530784 RAB5CP51148 216 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 RPS20P60866 119 aaKnown RBP4□□□□□ -1.77
CSDE1-213ENST00000530784 CACNG7P62955 275 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 RASL11AQ6T310 242 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 TEX261Q6UWH6 196 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 SLC51BQ86UW2 128 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 OR2D3Q8NGH3 330 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 MBD3L1Q8WWY6 194 aa4□□□□□ -1.77
CSDE1-213ENST00000530784 KANTRA0A1W2PQU2 76 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 XKRY2A2RUG3 117 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 TRGC1P0CF51 173 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 HERVK_113P61574 105 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 COTL1Q14019 142 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 CENPWQ5EE01 88 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 MANBALQ9NQG1 85 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 NIT2Q9NQR4 276 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
CSDE1-213ENST00000530784 IGKV3OR2-268A0A0C4DH90 116 aa3.98□□□□□ -1.77
CSDE1-213ENST00000530784 F2Z2F3 143 aa3.98□□□□□ -1.77
CSDE1-213ENST00000530784 GNG4P50150 75 aa3.98□□□□□ -1.77
CSDE1-213ENST00000530784 EIF5AP63241 154 aaKnown RBP3.98□□□□□ -1.77
CSDE1-213ENST00000530784 COX6A2Q02221 97 aa3.98□□□□□ -1.77
CSDE1-213ENST00000530784 MAJINQ3KP22 176 aa3.98□□□□□ -1.77
CSDE1-213ENST00000530784 C15orf56Q8N910 161 aa3.98□□□□□ -1.77
CSDE1-213ENST00000530784 GNG13Q9P2W3 67 aa3.98□□□□□ -1.77
CSDE1-213ENST00000530784 RNF213Q63HN8 5207 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 IGKV2-24A0A0C4DH68 120 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 C19orf71A6NCJ1 209 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 NDUFS6O75380 124 aaKnown RBP3.97□□□□□ -1.77
CSDE1-213ENST00000530784 IFNA1P01562 189 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 PRR3P79522 188 aaKnown RBP3.97□□□□□ -1.77
CSDE1-213ENST00000530784 NDUFA5Q16718 116 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 CLLU1Q5K131 121 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 AMMECR1LQ6DCA0 310 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 LYZL1Q6UWQ5 148 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 SMIM12Q96EX1 92 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 LINC01600Q96MT4 127 aa3.97□□□□□ -1.77
CSDE1-213ENST00000530784 PKHD1L1Q86WI1 4243 aa3.96□□□□□ -1.78
CSDE1-213ENST00000530784 GVQW2A0A096LPI5 108 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-213ENST00000530784 TEX46H3BTG2 121 aa3.96□□□□□ -1.78
CSDE1-213ENST00000530784 NTF3P20783 257 aa3.96□□□□□ -1.78
CSDE1-213ENST00000530784 CCL20P78556 96 aa3.96□□□□□ -1.78
CSDE1-213ENST00000530784 EIF5AL1Q6IS14 154 aaKnown RBP3.96□□□□□ -1.78
CSDE1-213ENST00000530784 RNASEKQ6P5S7 137 aaKnown RBP3.96□□□□□ -1.78
CSDE1-213ENST00000530784 LYPD6BQ8NI32 183 aa3.96□□□□□ -1.78
CSDE1-213ENST00000530784 BIN3Q9NQY0 253 aa3.96□□□□□ -1.78
CSDE1-213ENST00000530784 MED9Q9NWA0 146 aa3.96□□□□□ -1.78
CSDE1-213ENST00000530784 PKIGQ9Y2B9 76 aa3.96□□□□□ -1.78
CSDE1-213ENST00000530784 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-213ENST00000530784 A0A096LNI7 61 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 TRAV1-1A0A0B4J248 108 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 TRAV26-2A0A0B4J265 109 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 A0A0J9YXV3 536 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 IGKV2-29A2NJV5 120 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-213ENST00000530784 RAB19A4D1S5 217 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 LINC00862A6NCI5 91 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 PDE6DO43924 150 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 NCR2O95944 276 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 APCSP02743 223 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 FGF6P10767 208 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 RPL13AP40429 203 aaKnown RBP3.95□□□□□ -1.78
CSDE1-213ENST00000530784 MEF2BQ02080 365 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-213ENST00000530784 LINC00474Q9P2X8 69 aa3.95□□□□□ -1.78
CSDE1-213ENST00000530784 TRBV20OR9-2A0A075B6H5 130 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 ZNF25P17030 456 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-213ENST00000530784 XCL1P47992 114 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 RAB14P61106 215 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 SPINK6Q6UWN8 80 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 ALKAL2Q6UX46 152 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 Q6ZN92 141 aa3.94□□□□□ -1.78
CSDE1-213ENST00000530784 SMIM15Q7Z3B0 74 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms