RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 NTN5Q8WTR8 489 aaPredicted RBP7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BHQ93079 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BNQ99877 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 HIST1H2BMQ99879 126 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 C2orf88Q9BSF0 95 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 VCX2Q9H322 139 aa7.18□□□□□ -1.26
CAPN1-218ENST00000530442 PRSS1P07477 247 aa7.17□□□□□ -1.26
CAPN1-218ENST00000530442 PAPPA-AS1Q5QFB9 102 aa7.17□□□□□ -1.26
CAPN1-218ENST00000530442 LINC00242Q5T6M2 205 aa7.17□□□□□ -1.26
CAPN1-218ENST00000530442 HSPG2P98160 4391 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 IGLV5-52A0A0A0MRZ9 124 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 IGHV3OR16-9A0A0B4J2B5 98 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 NUPR1O60356 82 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 HSBP1O75506 76 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 HIGD2BQ4VC39 106 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 FAM19A3Q7Z5A8 133 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 FAM19A2Q8N3H0 131 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 PGPEP1Q9NXJ5 209 aa7.16□□□□□ -1.26
CAPN1-218ENST00000530442 GVQW2A0A096LPI5 108 aaPredicted RBP7.15□□□□□ -1.26
CAPN1-218ENST00000530442 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.26
CAPN1-218ENST00000530442 hDV102S1A0JD36 115 aa7.15□□□□□ -1.26
CAPN1-218ENST00000530442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.15□□□□□ -1.26
CAPN1-218ENST00000530442 COX7A2LO14548 114 aa7.15□□□□□ -1.26
CAPN1-218ENST00000530442 COX6A2Q02221 97 aa7.15□□□□□ -1.26
CAPN1-218ENST00000530442 C5orf38Q86SI9 138 aa7.15□□□□□ -1.26
CAPN1-218ENST00000530442 PMVKQ15126 192 aa7.14□□□□□ -1.27
CAPN1-218ENST00000530442 CFAP161Q6P656 301 aa7.14□□□□□ -1.27
CAPN1-218ENST00000530442 HERC2O95714 4834 aa7.13□□□□□ -1.27
CAPN1-218ENST00000530442 A0A0J9YXV3 536 aa7.13□□□□□ -1.27
CAPN1-218ENST00000530442 ATP5LO75964 103 aa7.13□□□□□ -1.27
CAPN1-218ENST00000530442 SLPIP03973 132 aa7.13□□□□□ -1.27
CAPN1-218ENST00000530442 MALP21145 153 aa7.13□□□□□ -1.27
CAPN1-218ENST00000530442 KRTAP10-1P60331 282 aa7.13□□□□□ -1.27
CAPN1-218ENST00000530442 CNBPP62633 177 aaKnown RBP7.13□□□□□ -1.27
CAPN1-218ENST00000530442 CST9LQ9H4G1 147 aa7.13□□□□□ -1.27
CAPN1-218ENST00000530442 A0A087WZ39 114 aa7.12□□□□□ -1.27
CAPN1-218ENST00000530442 GCSHP23434 173 aa7.12□□□□□ -1.27
CAPN1-218ENST00000530442 HERVK_113P63121 156 aa7.12□□□□□ -1.27
CAPN1-218ENST00000530442 LINC01620Q4KN68 170 aa7.12□□□□□ -1.27
CAPN1-218ENST00000530442 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
CAPN1-218ENST00000530442 LINC00526Q96FQ7 95 aa7.12□□□□□ -1.27
CAPN1-218ENST00000530442 IGLV4-69A0A075B6H9 119 aa7.11□□□□□ -1.27
CAPN1-218ENST00000530442 IGHV3-64A0A075B6Q5 118 aa7.11□□□□□ -1.27
CAPN1-218ENST00000530442 IGLV5-45A0A087WSX0 123 aa7.11□□□□□ -1.27
CAPN1-218ENST00000530442 TINCRA0A1B0GVN0 87 aa7.11□□□□□ -1.27
CAPN1-218ENST00000530442 APOMO95445 188 aa7.11□□□□□ -1.27
CAPN1-218ENST00000530442 SEC11AP67812 179 aa7.11□□□□□ -1.27
CAPN1-218ENST00000530442 SPAG11BQ08648 103 aa7.11□□□□□ -1.27
CAPN1-218ENST00000530442 LEPROTL1O95214 131 aa7.1□□□□□ -1.27
CAPN1-218ENST00000530442 IGLC3P0DOY3 106 aa7.1□□□□□ -1.27
CAPN1-218ENST00000530442 NDUFA6P56556 154 aa7.1□□□□□ -1.27
CAPN1-218ENST00000530442 COA6Q5JTJ3 125 aaKnown RBP7.1□□□□□ -1.27
CAPN1-218ENST00000530442 OR10D4PQ8NGN7 298 aa7.1□□□□□ -1.27
CAPN1-218ENST00000530442 ORAOV1Q8WV07 137 aa7.1□□□□□ -1.27
CAPN1-218ENST00000530442 GEMIN7Q9H840 131 aaKnown RBP7.1□□□□□ -1.27
CAPN1-218ENST00000530442 CDKN2A-AS1Q9UH64 79 aa7.1□□□□□ -1.27
CAPN1-218ENST00000530442 TRAV12-1A0A0B4J245 112 aa7.09□□□□□ -1.27
CAPN1-218ENST00000530442 ZNF561-AS1K7EIQ3 104 aa7.09□□□□□ -1.27
CAPN1-218ENST00000530442 LINC01561Q8N1V8 128 aa7.09□□□□□ -1.27
CAPN1-218ENST00000530442 LINC00469Q8N7U9 141 aa7.09□□□□□ -1.27
CAPN1-218ENST00000530442 C9orf163Q8N9P6 203 aa7.09□□□□□ -1.27
CAPN1-218ENST00000530442 CHAC1Q9BUX1 264 aa7.09□□□□□ -1.27
CAPN1-218ENST00000530442 FABP4P15090 132 aa7.08□□□□□ -1.28
CAPN1-218ENST00000530442 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.07□□□□□ -1.28
CAPN1-218ENST00000530442 C11orf86A6NJI1 115 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 SMIM1B2RUZ4 78 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 ZNF22P17026 224 aaPredicted RBP7.07□□□□□ -1.28
CAPN1-218ENST00000530442 KIAA0087Q14695 138 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 Q6ZRU5 148 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 Q6ZSA8 131 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 C2orf48Q96LS8 159 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 CARD19Q96LW7 228 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 FAM30AQ9NZY2 134 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 HSPB8Q9UJY1 196 aa7.07□□□□□ -1.28
CAPN1-218ENST00000530442 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
CAPN1-218ENST00000530442 FAT1Q14517 4588 aa7.06□□□□□ -1.28
CAPN1-218ENST00000530442 F8VRH5 84 aa7.06□□□□□ -1.28
CAPN1-218ENST00000530442 H0Y8G0 127 aa7.06□□□□□ -1.28
CAPN1-218ENST00000530442 SPINK8P0C7L1 97 aa7.06□□□□□ -1.28
CAPN1-218ENST00000530442 SYCNQ0VAF6 134 aa7.06□□□□□ -1.28
CAPN1-218ENST00000530442 ODF1Q14990 250 aa7.06□□□□□ -1.28
CAPN1-218ENST00000530442 PACRGQ96M98 296 aaPredicted RBP7.06□□□□□ -1.28
CAPN1-218ENST00000530442 CAMK2N2Q96S95 79 aa7.06□□□□□ -1.28
CAPN1-218ENST00000530442 MRPL35Q9NZE8 188 aaKnown RBP7.06□□□□□ -1.28
CAPN1-218ENST00000530442 CDK2AP2O75956 126 aa7.05□□□□□ -1.28
CAPN1-218ENST00000530442 HAMPP81172 84 aa7.05□□□□□ -1.28
CAPN1-218ENST00000530442 SDIM1Q6ZPB5 146 aa7.05□□□□□ -1.28
CAPN1-218ENST00000530442 H3BRM9 83 aa7.04□□□□□ -1.28
CAPN1-218ENST00000530442 PANO1I0J062 215 aa7.04□□□□□ -1.28
CAPN1-218ENST00000530442 NDUFA1O15239 70 aa7.04□□□□□ -1.28
CAPN1-218ENST00000530442 XGP55808 180 aa7.04□□□□□ -1.28
CAPN1-218ENST00000530442 C10orf25Q5T742 122 aa7.04□□□□□ -1.28
CAPN1-218ENST00000530442 Q8IZM0 81 aa7.04□□□□□ -1.28
CAPN1-218ENST00000530442 TOMM7Q9P0U1 55 aa7.04□□□□□ -1.28
CAPN1-218ENST00000530442 F8WDY8 70 aa7.03□□□□□ -1.28
CAPN1-218ENST00000530442 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
CAPN1-218ENST00000530442 C2orf82Q6UX34 121 aa7.03□□□□□ -1.28
CAPN1-218ENST00000530442 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
CAPN1-218ENST00000530442 C6orf48Q9UBA6 75 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 360.9 ms