RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 DNAH12Q6ZR08 3092 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 BRWD1Q9NSI6 2320 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 PCDH15Q96QU1 1955 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 DOCK11Q5JSL3 2073 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 TRBV30A0A0K0K1B3 111 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 RBAKDNA6NC62 111 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 D6R8Y8 96 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 SNCGO76070 127 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 PYYP10082 97 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 PLNP26678 52 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 ZNF137PP52743 207 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 GNG5P63218 68 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 UBE2L3P68036 154 aaKnown RBP1.91□□□□□ -2.1
CASP4-208ENST00000530309 SPINK9Q5DT21 86 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 LYRM7Q5U5X0 104 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 LINC00643Q86TS7 51 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 RPS19BP1Q86WX3 136 aaKnown RBP1.91□□□□□ -2.1
CASP4-208ENST00000530309 OR13C6PQ8NH95 151 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 NXT2Q9NPJ8 142 aaKnown RBP1.91□□□□□ -2.1
CASP4-208ENST00000530309 OTORQ9NRC9 128 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 PDE4DIPQ5VU43 2346 aa1.91□□□□□ -2.1
CASP4-208ENST00000530309 TEX49A0A1B0GTD5 131 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 IGIPA6NJ69 53 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 F8VRH5 84 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 LEPROTO15243 131 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 ACYP1P07311 99 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 PLGLB1Q02325 96 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 DEFB110Q30KQ9 67 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 TMEM170BQ5T4T1 132 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 C1orf158Q8N1D5 194 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 FAM216BQ8N7L0 139 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 TOMM6Q96B49 74 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 PLEKHB2Q96CS7 222 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 OBSCN-AS1Q96MR7 158 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 PRO1854Q9UHT4 67 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 RP1P56715 2156 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 EML6Q6ZMW3 1958 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 CNTRLQ7Z7A1 2325 aa1.9□□□□□ -2.11
CASP4-208ENST00000530309 HEATR1Q9H583 2144 aaKnown RBP1.9□□□□□ -2.11
CASP4-208ENST00000530309 HTTP42858 3142 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 PTPRBP23467 1997 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 TNCP24821 2201 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 TRBV19A0A075B6N1 114 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 TRAV2A0A0B4J234 112 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 SPTY2D1-AS1A0A0U1RR47 76 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 IQCF6A8MYZ5 107 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 E7EUB6 86 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 MSMBP08118 114 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 WT1-ASQ06250 92 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 KLK9Q2XQG4 91 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 C10orf113Q5VZT2 155 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 LYPD5Q6UWN5 251 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 TET1Q8NFU7 2136 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 TMEM167AQ8TBQ9 72 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 DPH3P1Q9H4G8 78 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 KLK9Q9UKQ9 250 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 FN1P02751 2386 aaKnown RBP1.89□□□□□ -2.11
CASP4-208ENST00000530309 PTPRSQ13332 1948 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 MED12Q93074 2177 aa1.89□□□□□ -2.11
CASP4-208ENST00000530309 TRBV7-1A0A0A6YYK4 115 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 FAM236AA0A1B0GUQ0 79 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 FAM236BA0A1B0GV22 79 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 C5orf67F2Z3F1 127 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 CCL16O15467 120 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 BCE1O60756 84 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 CCL8P80075 99 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 PDE6HQ13956 83 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 RPL39P5Q59GN2 51 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 C9orf153Q5TBE3 101 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 ZNF833PQ6ZTB9 187 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 FP248Q71RG6 208 aaPredicted RBP1.88□□□□□ -2.11
CASP4-208ENST00000530309 LINC00305Q7Z4B0 112 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 SERP2Q8N6R1 65 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 C3orf56Q8N813 242 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 RTL8AQ9BWD3 113 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 KNTC1P50748 2209 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 CR1P17927 2039 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 UTRNP46939 3433 aa1.88□□□□□ -2.11
CASP4-208ENST00000530309 F5P12259 2224 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 XIRP2A4UGR9 3374 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 CHD9Q3L8U1 2897 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 TRAV12-2A0A075B6T6 113 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 I3L2K1 104 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 ATOX1O00244 68 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 SAA2P0DJI9 122 aaPredicted RBP1.87□□□□□ -2.11
CASP4-208ENST00000530309 COX6A1P12074 109 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 CKS2P33552 79 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 ZNF80P51504 273 aaPredicted RBP1.87□□□□□ -2.11
CASP4-208ENST00000530309 ATXN8Q156A1 80 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 C2orf82Q6UX34 121 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 HRCT1Q6UXD1 115 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 GOLT1AQ6ZVE7 132 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 AAED1Q7RTV5 226 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 LINC00311Q8N616 119 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 KNL1Q8NG31 2342 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 UBE2D4Q9Y2X8 147 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 EXPH5Q8NEV8 1989 aa1.87□□□□□ -2.11
CASP4-208ENST00000530309 PLCE1Q9P212 2302 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 ARFGEF3Q5TH69 2177 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms