RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 ITPR2Q14571 2701 aa9.01□□□□□ -0.97
SCN3B-206ENST00000530277 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
SCN3B-206ENST00000530277 COX8CQ7Z4L0 72 aa9.01□□□□□ -0.97
SCN3B-206ENST00000530277 TMEM263Q8WUH6 116 aaKnown RBP9.01□□□□□ -0.97
SCN3B-206ENST00000530277 LINC00694P0DN24 101 aa9.01□□□□□ -0.97
SCN3B-206ENST00000530277 CELSR1Q9NYQ6 3014 aa9.01□□□□□ -0.97
SCN3B-206ENST00000530277 CELSR2Q9HCU4 2923 aa9□□□□□ -0.97
SCN3B-206ENST00000530277 TMEM89A2RUT3 159 aa9□□□□□ -0.97
SCN3B-206ENST00000530277 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
SCN3B-206ENST00000530277 DAZ2Q13117 558 aaKnown RBP9□□□□□ -0.97
SCN3B-206ENST00000530277 DAZ4Q86SG3 579 aaKnown RBP9□□□□□ -0.97
SCN3B-206ENST00000530277 C16orf74Q96GX8 76 aa9□□□□□ -0.97
SCN3B-206ENST00000530277 DAZ3Q9NR90 486 aaKnown RBP9□□□□□ -0.97
SCN3B-206ENST00000530277 SETXQ7Z333 2677 aaKnown RBP8.99□□□□□ -0.97
SCN3B-206ENST00000530277 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
SCN3B-206ENST00000530277 KLK12Q9UKR0 248 aa8.99□□□□□ -0.97
SCN3B-206ENST00000530277 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
SCN3B-206ENST00000530277 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
SCN3B-206ENST00000530277 SLPIP03973 132 aa8.98□□□□□ -0.97
SCN3B-206ENST00000530277 LECT2O14960 151 aa8.98□□□□□ -0.97
SCN3B-206ENST00000530277 DNAJC30Q96LL9 226 aa8.98□□□□□ -0.97
SCN3B-206ENST00000530277 MIAQ16674 131 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 ADAMTSL4-AS1Q5T5F5 129 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 UNC79Q9P2D8 2635 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 TRBV6-5A0A0K0K1A5 114 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 FAM110AQ9BQ89 295 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 IGKV3D-7A0A0C4DH55 119 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 LINC00269Q8N2A0 174 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 UBE2D4Q9Y2X8 147 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 KIF25-AS1Q9Y6Z4 181 aa8.97□□□□□ -0.97
SCN3B-206ENST00000530277 ZNF561-AS1K7EIQ3 104 aa8.96□□□□□ -0.97
SCN3B-206ENST00000530277 LINC00315P59091 139 aa8.96□□□□□ -0.97
SCN3B-206ENST00000530277 COX6A2Q02221 97 aa8.96□□□□□ -0.97
SCN3B-206ENST00000530277 ODF3Q96PU9 254 aa8.96□□□□□ -0.97
SCN3B-206ENST00000530277 FAM236AA0A1B0GUQ0 79 aa8.96□□□□□ -0.98
SCN3B-206ENST00000530277 FAM236BA0A1B0GV22 79 aa8.96□□□□□ -0.98
SCN3B-206ENST00000530277 NCR3O14931 201 aa8.96□□□□□ -0.98
SCN3B-206ENST00000530277 STAB1Q9NY15 2570 aa8.95□□□□□ -0.98
SCN3B-206ENST00000530277 NDUFV3P56181 108 aaKnown RBP8.95□□□□□ -0.98
SCN3B-206ENST00000530277 C1orf158Q8N1D5 194 aa8.95□□□□□ -0.98
SCN3B-206ENST00000530277 RNF152Q8N8N0 203 aa8.95□□□□□ -0.98
SCN3B-206ENST00000530277 HAMPP81172 84 aa8.94□□□□□ -0.98
SCN3B-206ENST00000530277 LINC00308Q8TCZ7 52 aa8.94□□□□□ -0.98
SCN3B-206ENST00000530277 TRAV13-2A0A0B4J235 113 aa8.94□□□□□ -0.98
SCN3B-206ENST00000530277 SPATA25Q9BR10 227 aa8.94□□□□□ -0.98
SCN3B-206ENST00000530277 TRBV10-2A0A0K0K1G8 114 aa8.93□□□□□ -0.98
SCN3B-206ENST00000530277 IGKV2D-24A0A075B6R9 120 aa8.93□□□□□ -0.98
SCN3B-206ENST00000530277 APOC4P55056 127 aa8.92□□□□□ -0.98
SCN3B-206ENST00000530277 HIGD2BQ4VC39 106 aa8.92□□□□□ -0.98
SCN3B-206ENST00000530277 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
SCN3B-206ENST00000530277 COL6A5A8TX70 2615 aa8.92□□□□□ -0.98
SCN3B-206ENST00000530277 TRAV25A0A0B4J276 109 aa8.92□□□□□ -0.98
SCN3B-206ENST00000530277 COX7A2LO14548 114 aa8.92□□□□□ -0.98
SCN3B-206ENST00000530277 LINC00242Q5T6M2 205 aa8.92□□□□□ -0.98
SCN3B-206ENST00000530277 RPL32P62910 135 aaKnown RBP8.91□□□□□ -0.98
SCN3B-206ENST00000530277 TRBV10-1A0A0K0K1A3 114 aa8.91□□□□□ -0.98
SCN3B-206ENST00000530277 PRB2P02812 416 aaPredicted RBP8.91□□□□□ -0.98
SCN3B-206ENST00000530277 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
SCN3B-206ENST00000530277 UBE2D1P51668 147 aa8.91□□□□□ -0.98
SCN3B-206ENST00000530277 DEFB105AQ8NG35 78 aa8.91□□□□□ -0.98
SCN3B-206ENST00000530277 CHCHD7Q9BUK0 85 aa8.9□□□□□ -0.98
SCN3B-206ENST00000530277 PRO0255Q9UI72 69 aa8.9□□□□□ -0.98
SCN3B-206ENST00000530277 IGLV4-60A0A075B6I1 120 aa8.9□□□□□ -0.98
SCN3B-206ENST00000530277 A0A0B4J2C4 111 aa8.89□□□□□ -0.99
SCN3B-206ENST00000530277 PRR3P79522 188 aaKnown RBP8.89□□□□□ -0.99
SCN3B-206ENST00000530277 TRBV6-8A0A0A6YYG3 113 aa8.89□□□□□ -0.99
SCN3B-206ENST00000530277 CDIP1Q9H305 208 aa8.89□□□□□ -0.99
SCN3B-206ENST00000530277 INAFM2P0DMQ5 153 aa8.88□□□□□ -0.99
SCN3B-206ENST00000530277 MRPS36P82909 103 aaKnown RBP8.88□□□□□ -0.99
SCN3B-206ENST00000530277 LY6G6DO95868 133 aa8.88□□□□□ -0.99
SCN3B-206ENST00000530277 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
SCN3B-206ENST00000530277 RPL18AQ02543 176 aaKnown RBP8.88□□□□□ -0.99
SCN3B-206ENST00000530277 SPAG11BQ08648 103 aa8.88□□□□□ -0.99
SCN3B-206ENST00000530277 PYGO1Q9Y3Y4 419 aa8.88□□□□□ -0.99
SCN3B-206ENST00000530277 C9orf116Q5BN46 136 aaPredicted RBP8.87□□□□□ -0.99
SCN3B-206ENST00000530277 C9orf66Q5T8R8 295 aa8.87□□□□□ -0.99
SCN3B-206ENST00000530277 OXLD1Q5BKU9 147 aa8.86□□□□□ -0.99
SCN3B-206ENST00000530277 CAMK2N2Q96S95 79 aa8.86□□□□□ -0.99
SCN3B-206ENST00000530277 KLK5Q9Y337 293 aaPredicted RBP8.86□□□□□ -0.99
SCN3B-206ENST00000530277 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
SCN3B-206ENST00000530277 ZNF575Q86XF7 245 aa8.86□□□□□ -0.99
SCN3B-206ENST00000530277 CDC42SE2Q9NRR3 84 aa8.86□□□□□ -0.99
SCN3B-206ENST00000530277 NDUFA1O15239 70 aa8.85□□□□□ -0.99
SCN3B-206ENST00000530277 SVIPQ8NHG7 77 aa8.85□□□□□ -0.99
SCN3B-206ENST00000530277 SPENQ96T58 3664 aaKnown RBP8.85□□□□□ -0.99
SCN3B-206ENST00000530277 CHCHD10Q8WYQ3 142 aaPredicted RBP8.85□□□□□ -0.99
SCN3B-206ENST00000530277 REG3AQ06141 175 aa8.85□□□□□ -0.99
SCN3B-206ENST00000530277 SMIM1B2RUZ4 78 aa8.84□□□□□ -0.99
SCN3B-206ENST00000530277 M0QXV9 152 aa8.84□□□□□ -0.99
SCN3B-206ENST00000530277 LRRC75A-AS1Q8N1F1 130 aa8.84□□□□□ -0.99
SCN3B-206ENST00000530277 FAM19A4Q96LR4 140 aa8.84□□□□□ -0.99
SCN3B-206ENST00000530277 UBE2D3P61077 147 aa8.84□□□□□ -0.99
SCN3B-206ENST00000530277 UBE2D2P62837 147 aa8.84□□□□□ -0.99
SCN3B-206ENST00000530277 IGHV4-28A0A0C4DH34 117 aa8.83□□□□□ -1
SCN3B-206ENST00000530277 H7C423 109 aa8.83□□□□□ -1
SCN3B-206ENST00000530277 ORMDL1Q9P0S3 153 aa8.83□□□□□ -1
SCN3B-206ENST00000530277 PSCAO43653 123 aa8.83□□□□□ -1
SCN3B-206ENST00000530277 SPANXCQ9NY87 97 aa8.83□□□□□ -1
SCN3B-206ENST00000530277 LOC107984640A0A0U1RRK4 108 aa8.83□□□□□ -1
SCN3B-206ENST00000530277 H3BT86 120 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms