RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 RNF183Q96D59 192 aa11.21□□□□□ -0.61
TM9SF1-208ENST00000529332 NTN5Q8WTR8 489 aaPredicted RBP11.21□□□□□ -0.62
TM9SF1-208ENST00000529332 HERVK_113P63121 156 aa11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 RPL36AP83881 106 aaKnown RBP11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 RPL36ALQ969Q0 106 aaKnown RBP11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 LINC01600Q96MT4 127 aa11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 TRBV10-1A0A0K0K1A3 114 aa11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 TRBV10-2A0A0K0K1G8 114 aa11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 IFITM1P13164 125 aa11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
TM9SF1-208ENST00000529332 TRAV4A0A0B4J268 109 aa11.19□□□□□ -0.62
TM9SF1-208ENST00000529332 FAM19A3Q7Z5A8 133 aa11.19□□□□□ -0.62
TM9SF1-208ENST00000529332 Q9H8V8 135 aa11.19□□□□□ -0.62
TM9SF1-208ENST00000529332 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
TM9SF1-208ENST00000529332 TRAV13-1A0A0B4J241 112 aa11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 SMIM1B2RUZ4 78 aa11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 RPL13AP40429 203 aaKnown RBP11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 GAGE4Q13068 117 aa11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 GAGE5Q13069 117 aa11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 NOP10Q9NPE3 64 aaKnown RBP11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 CSDC2Q9Y534 153 aaKnown RBP11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 DAZ2Q13117 558 aaKnown RBP11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 CLEC2BQ92478 149 aa11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 ZNF625Q96I27 306 aaPredicted RBP11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
TM9SF1-208ENST00000529332 SPATA3Q8NHX4 192 aa11.17□□□□□ -0.62
TM9SF1-208ENST00000529332 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
TM9SF1-208ENST00000529332 C19orf73Q9NVV2 129 aa11.17□□□□□ -0.62
TM9SF1-208ENST00000529332 TEX49A0A1B0GTD5 131 aa11.17□□□□□ -0.62
TM9SF1-208ENST00000529332 A0A1B0GV72 72 aa11.17□□□□□ -0.62
TM9SF1-208ENST00000529332 H7C423 109 aa11.17□□□□□ -0.62
TM9SF1-208ENST00000529332 CDC42SE2Q9NRR3 84 aa11.17□□□□□ -0.62
TM9SF1-208ENST00000529332 PLAC8L1A1L4L8 177 aa11.16□□□□□ -0.62
TM9SF1-208ENST00000529332 TMEM262E9PQX1 116 aa11.16□□□□□ -0.62
TM9SF1-208ENST00000529332 CKS1BP61024 79 aa11.16□□□□□ -0.62
TM9SF1-208ENST00000529332 LINC00308Q8TCZ7 52 aa11.16□□□□□ -0.62
TM9SF1-208ENST00000529332 A0A0U1RRA0 63 aa11.15□□□□□ -0.62
TM9SF1-208ENST00000529332 COX6CP09669 75 aa11.15□□□□□ -0.62
TM9SF1-208ENST00000529332 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.62
TM9SF1-208ENST00000529332 FBN1P35555 2871 aaKnown RBP11.15□□□□□ -0.62
TM9SF1-208ENST00000529332 F5H768 121 aa11.15□□□□□ -0.62
TM9SF1-208ENST00000529332 WIPF1O43516 503 aa11.15□□□□□ -0.62
TM9SF1-208ENST00000529332 VWFP04275 2813 aa11.14□□□□□ -0.63
TM9SF1-208ENST00000529332 LST1O00453 97 aa11.14□□□□□ -0.63
TM9SF1-208ENST00000529332 C2orf82Q6UX34 121 aa11.14□□□□□ -0.63
TM9SF1-208ENST00000529332 SOSTDC1Q6X4U4 206 aa11.14□□□□□ -0.63
TM9SF1-208ENST00000529332 LOC100131303A0A0U1RQF7 123 aa11.13□□□□□ -0.63
TM9SF1-208ENST00000529332 GAGE7O76087 117 aa11.12□□□□□ -0.63
TM9SF1-208ENST00000529332 GAGE12FP0CL80 117 aa11.12□□□□□ -0.63
TM9SF1-208ENST00000529332 GAGE12GP0CL81 117 aa11.12□□□□□ -0.63
TM9SF1-208ENST00000529332 GAGE12IP0CL82 117 aa11.12□□□□□ -0.63
TM9SF1-208ENST00000529332 RPL35AP18077 110 aaKnown RBP11.12□□□□□ -0.63
TM9SF1-208ENST00000529332 UBE2WQ96B02 151 aa11.12□□□□□ -0.63
TM9SF1-208ENST00000529332 H3BT86 120 aa11.11□□□□□ -0.63
TM9SF1-208ENST00000529332 C16orf74Q96GX8 76 aa11.11□□□□□ -0.63
TM9SF1-208ENST00000529332 TMEM243Q9BU79 118 aa11.11□□□□□ -0.63
TM9SF1-208ENST00000529332 TRGV2A0A075B6R0 118 aa11.11□□□□□ -0.63
TM9SF1-208ENST00000529332 CSNK1G2-AS1Q8NCQ2 148 aa11.1□□□□□ -0.63
TM9SF1-208ENST00000529332 UBE2L6O14933 153 aa11.09□□□□□ -0.63
TM9SF1-208ENST00000529332 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
TM9SF1-208ENST00000529332 TRAV8-4A0A0B4J246 113 aa11.08□□□□□ -0.64
TM9SF1-208ENST00000529332 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
TM9SF1-208ENST00000529332 OVOL2Q9BRP0 275 aa11.08□□□□□ -0.64
TM9SF1-208ENST00000529332 HERV-K104P63124 156 aa11.06□□□□□ -0.64
TM9SF1-208ENST00000529332 TRGV4A0A0C4DH28 118 aa11.05□□□□□ -0.64
TM9SF1-208ENST00000529332 GAGE6Q13070 117 aa11.05□□□□□ -0.64
TM9SF1-208ENST00000529332 COPS9Q8WXC6 57 aa11.05□□□□□ -0.64
TM9SF1-208ENST00000529332 STAB1Q9NY15 2570 aa11.05□□□□□ -0.64
TM9SF1-208ENST00000529332 COX7A2LO14548 114 aa11.05□□□□□ -0.64
TM9SF1-208ENST00000529332 IGLV4-60A0A075B6I1 120 aa11.04□□□□□ -0.64
TM9SF1-208ENST00000529332 FHL2Q14192 279 aa11.04□□□□□ -0.64
TM9SF1-208ENST00000529332 DEFB121Q5J5C9 76 aa11.04□□□□□ -0.64
TM9SF1-208ENST00000529332 OXLD1Q5BKU9 147 aa11.03□□□□□ -0.64
TM9SF1-208ENST00000529332 IGKV3OR2-268A0A0C4DH90 116 aa11.03□□□□□ -0.64
TM9SF1-208ENST00000529332 SNCGO76070 127 aa11.03□□□□□ -0.64
TM9SF1-208ENST00000529332 APOC4P55056 127 aa11.03□□□□□ -0.64
TM9SF1-208ENST00000529332 TRBV6-8A0A0A6YYG3 113 aa11.02□□□□□ -0.64
TM9SF1-208ENST00000529332 KIR2DL5BQ8NHK3 375 aa11.02□□□□□ -0.64
TM9SF1-208ENST00000529332 COX7B2Q8TF08 81 aa11.02□□□□□ -0.64
TM9SF1-208ENST00000529332 EGFEM1PQ0D2K5 195 aa11.02□□□□□ -0.65
TM9SF1-208ENST00000529332 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
TM9SF1-208ENST00000529332 PPDPFQ9H3Y8 114 aa11.01□□□□□ -0.65
TM9SF1-208ENST00000529332 COL6A5A8TX70 2615 aa11.01□□□□□ -0.65
TM9SF1-208ENST00000529332 TRAV26-1A0A087WT03 109 aa11□□□□□ -0.65
TM9SF1-208ENST00000529332 GAGE2BQ13066 116 aa11□□□□□ -0.65
TM9SF1-208ENST00000529332 GAGE2EQ4V326 116 aa11□□□□□ -0.65
TM9SF1-208ENST00000529332 TOMM7Q9P0U1 55 aa11□□□□□ -0.65
TM9SF1-208ENST00000529332 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
TM9SF1-208ENST00000529332 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
TM9SF1-208ENST00000529332 MIR7-3HGQ8N6C7 128 aa10.99□□□□□ -0.65
TM9SF1-208ENST00000529332 CHCHD5Q9BSY4 110 aa10.99□□□□□ -0.65
TM9SF1-208ENST00000529332 FAM218AQ96MZ4 157 aa10.99□□□□□ -0.65
TM9SF1-208ENST00000529332 ANAPC13Q9BS18 74 aa10.99□□□□□ -0.65
TM9SF1-208ENST00000529332 TRRAPQ9Y4A5 3859 aa10.97□□□□□ -0.65
TM9SF1-208ENST00000529332 FAM240AA0A1B0GVK7 77 aa10.97□□□□□ -0.65
TM9SF1-208ENST00000529332 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
TM9SF1-208ENST00000529332 IGKV2-28A0A075B6P5 120 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms