RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 SLC7A5P1Q8MH63 180 aa8.11□□□□□ -1.11
HIF3A-212ENST00000529205 TMEM191AQ9H0A3 160 aa8.11□□□□□ -1.11
HIF3A-212ENST00000529205 CARHSP1Q9Y2V2 147 aaKnown RBP8.11□□□□□ -1.11
HIF3A-212ENST00000529205 MUC2Q02817 5179 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 KRTAP1-4P0C5Y4 121 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 FAM74A3Q4VXF1 159 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 C10orf91Q5T1B1 145 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 UQCC3Q6UW78 93 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 FAM231DQ6ZW35 169 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 ORAOV1Q8WV07 137 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 NAT8Q9UHE5 227 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 V9GYV3 84 aa8.1□□□□□ -1.11
HIF3A-212ENST00000529205 FAM168BA1KXE4 195 aa8.09□□□□□ -1.11
HIF3A-212ENST00000529205 TLX1NBP0CAT3 122 aa8.09□□□□□ -1.11
HIF3A-212ENST00000529205 RAB4AP20338 218 aa8.09□□□□□ -1.11
HIF3A-212ENST00000529205 GAGE2EQ4V326 116 aa8.09□□□□□ -1.11
HIF3A-212ENST00000529205 GAGE2DQ9UEU5 116 aa8.09□□□□□ -1.11
HIF3A-212ENST00000529205 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
HIF3A-212ENST00000529205 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
HIF3A-212ENST00000529205 M0QXV9 152 aa8.08□□□□□ -1.12
HIF3A-212ENST00000529205 ADIRFQ15847 76 aa8.08□□□□□ -1.12
HIF3A-212ENST00000529205 CT83Q5H943 113 aa8.08□□□□□ -1.12
HIF3A-212ENST00000529205 TIMM21Q9BVV7 248 aa8.08□□□□□ -1.12
HIF3A-212ENST00000529205 PPP1R2P9O14990 202 aa8.07□□□□□ -1.12
HIF3A-212ENST00000529205 TSPAN13O95857 204 aa8.07□□□□□ -1.12
HIF3A-212ENST00000529205 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
HIF3A-212ENST00000529205 Q6ZUT4 128 aa8.07□□□□□ -1.12
HIF3A-212ENST00000529205 KRTAP11-1Q8IUC1 163 aa8.07□□□□□ -1.12
HIF3A-212ENST00000529205 AMN1Q8IY45 258 aa8.07□□□□□ -1.12
HIF3A-212ENST00000529205 OSTCQ9NRP0 149 aa8.07□□□□□ -1.12
HIF3A-212ENST00000529205 HIGD1CA8MV81 97 aa8.05□□□□□ -1.12
HIF3A-212ENST00000529205 TCAPO15273 167 aa8.05□□□□□ -1.12
HIF3A-212ENST00000529205 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
HIF3A-212ENST00000529205 SEC11CQ9BY50 192 aa8.05□□□□□ -1.12
HIF3A-212ENST00000529205 F8W036 122 aa8.04□□□□□ -1.12
HIF3A-212ENST00000529205 ZNF861PO60384 105 aa8.04□□□□□ -1.12
HIF3A-212ENST00000529205 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
HIF3A-212ENST00000529205 C6orf48Q9UBA6 75 aa8.04□□□□□ -1.12
HIF3A-212ENST00000529205 IGHV3OR16-9A0A0B4J2B5 98 aa8.03□□□□□ -1.12
HIF3A-212ENST00000529205 SMKR1H3BMG3 65 aa8.03□□□□□ -1.12
HIF3A-212ENST00000529205 RIGQ13278 110 aa8.03□□□□□ -1.12
HIF3A-212ENST00000529205 C10orf25Q5T742 122 aa8.03□□□□□ -1.12
HIF3A-212ENST00000529205 PACRGQ96M98 296 aaPredicted RBP8.03□□□□□ -1.12
HIF3A-212ENST00000529205 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
HIF3A-212ENST00000529205 TRBV30A0A0K0K1B3 111 aa8.02□□□□□ -1.13
HIF3A-212ENST00000529205 SMIM27A0A1W2PRY6 76 aa8.02□□□□□ -1.13
HIF3A-212ENST00000529205 NUPR1O60356 82 aa8.02□□□□□ -1.13
HIF3A-212ENST00000529205 HBBP68871 147 aa8.02□□□□□ -1.13
HIF3A-212ENST00000529205 SPANXA1Q9NS26 97 aa8.02□□□□□ -1.13
HIF3A-212ENST00000529205 IFITM10A6NMD0 228 aa8.01□□□□□ -1.13
HIF3A-212ENST00000529205 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
HIF3A-212ENST00000529205 NRACQ8N912 160 aa8.01□□□□□ -1.13
HIF3A-212ENST00000529205 PNRC1Q12796 327 aaPredicted RBP8□□□□□ -1.13
HIF3A-212ENST00000529205 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
HIF3A-212ENST00000529205 C20orf78Q9BR46 151 aa8□□□□□ -1.13
HIF3A-212ENST00000529205 CRYGAP11844 174 aa7.99□□□□□ -1.13
HIF3A-212ENST00000529205 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
HIF3A-212ENST00000529205 LBHQ53QV2 105 aaPredicted RBP7.99□□□□□ -1.13
HIF3A-212ENST00000529205 KRTAP7-1Q8IUC3 87 aa7.99□□□□□ -1.13
HIF3A-212ENST00000529205 RPL28P46779 137 aaKnown RBP7.98□□□□□ -1.13
HIF3A-212ENST00000529205 RPL39P62891 51 aaKnown RBP7.98□□□□□ -1.13
HIF3A-212ENST00000529205 A0A1B0GXF2 115 aa7.97□□□□□ -1.13
HIF3A-212ENST00000529205 APOC3P02656 99 aa7.97□□□□□ -1.13
HIF3A-212ENST00000529205 CKS2P33552 79 aa7.97□□□□□ -1.13
HIF3A-212ENST00000529205 RPL32P62910 135 aaKnown RBP7.97□□□□□ -1.13
HIF3A-212ENST00000529205 C9orf129Q5T035 196 aaKnown RBP7.97□□□□□ -1.13
HIF3A-212ENST00000529205 CTDSP1Q9GZU7 261 aa7.97□□□□□ -1.13
HIF3A-212ENST00000529205 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
HIF3A-212ENST00000529205 TRBV24-1A0A075B6N3 115 aa7.96□□□□□ -1.14
HIF3A-212ENST00000529205 IFI27P40305 119 aaPredicted RBP7.96□□□□□ -1.14
HIF3A-212ENST00000529205 KIAA0087Q14695 138 aa7.96□□□□□ -1.14
HIF3A-212ENST00000529205 MRPL51Q4U2R6 128 aaKnown RBP7.96□□□□□ -1.14
HIF3A-212ENST00000529205 FAM104BQ5XKR9 115 aa7.96□□□□□ -1.14
HIF3A-212ENST00000529205 NAT8BQ9UHF3 227 aa7.96□□□□□ -1.14
HIF3A-212ENST00000529205 MT-ND4LP03901 98 aa7.95□□□□□ -1.14
HIF3A-212ENST00000529205 PRSS2P07478 247 aa7.95□□□□□ -1.14
HIF3A-212ENST00000529205 C2orf82Q6UX34 121 aa7.95□□□□□ -1.14
HIF3A-212ENST00000529205 ANAPC16Q96DE5 110 aa7.95□□□□□ -1.14
HIF3A-212ENST00000529205 YPEL4Q96NS1 127 aa7.95□□□□□ -1.14
HIF3A-212ENST00000529205 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
HIF3A-212ENST00000529205 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
HIF3A-212ENST00000529205 CKS1BP61024 79 aa7.94□□□□□ -1.14
HIF3A-212ENST00000529205 MRPL54Q6P161 138 aaKnown RBP7.94□□□□□ -1.14
HIF3A-212ENST00000529205 SMIM2Q9BVW6 85 aa7.94□□□□□ -1.14
HIF3A-212ENST00000529205 A0A087X002 238 aa7.93□□□□□ -1.14
HIF3A-212ENST00000529205 A0A1B0GW15 77 aa7.93□□□□□ -1.14
HIF3A-212ENST00000529205 RAB5AP20339 215 aa7.93□□□□□ -1.14
HIF3A-212ENST00000529205 NDUFA5Q16718 116 aa7.93□□□□□ -1.14
HIF3A-212ENST00000529205 LINC00242Q5T6M2 205 aa7.93□□□□□ -1.14
HIF3A-212ENST00000529205 LINC01561Q8N1V8 128 aa7.93□□□□□ -1.14
HIF3A-212ENST00000529205 FAM104AQ969W3 186 aa7.93□□□□□ -1.14
HIF3A-212ENST00000529205 RPS10P5Q9NQ39 176 aa7.93□□□□□ -1.14
HIF3A-212ENST00000529205 BCE1O60756 84 aa7.92□□□□□ -1.14
HIF3A-212ENST00000529205 RHEBQ15382 184 aa7.92□□□□□ -1.14
HIF3A-212ENST00000529205 C6orf226Q5I0X4 101 aa7.92□□□□□ -1.14
HIF3A-212ENST00000529205 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
HIF3A-212ENST00000529205 Q6ZN92 141 aa7.91□□□□□ -1.14
HIF3A-212ENST00000529205 TEX43Q6ZNM6 134 aa7.91□□□□□ -1.14
HIF3A-212ENST00000529205 MRPL55Q7Z7F7 128 aaKnown RBP7.91□□□□□ -1.14
HIF3A-212ENST00000529205 SVBPQ8N300 66 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms