RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 C2orf88Q9BSF0 95 aa11.27□□□□□ -0.61
CHRDL2-206ENST00000528789 VCX2Q9H322 139 aa11.27□□□□□ -0.61
CHRDL2-206ENST00000528789 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.26□□□□□ -0.61
CHRDL2-206ENST00000528789 SCGB3A1Q96QR1 104 aa11.26□□□□□ -0.61
CHRDL2-206ENST00000528789 AMELXQ99217 191 aa11.26□□□□□ -0.61
CHRDL2-206ENST00000528789 SMR3BP02814 79 aaPredicted RBP11.25□□□□□ -0.61
CHRDL2-206ENST00000528789 UBE2D1P51668 147 aa11.25□□□□□ -0.61
CHRDL2-206ENST00000528789 LINC00242Q5T6M2 205 aa11.25□□□□□ -0.61
CHRDL2-206ENST00000528789 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
CHRDL2-206ENST00000528789 IGHV3OR16-9A0A0B4J2B5 98 aa11.24□□□□□ -0.61
CHRDL2-206ENST00000528789 ZNF561-AS1K7EIQ3 104 aa11.24□□□□□ -0.61
CHRDL2-206ENST00000528789 NPSP0C0P6 89 aa11.24□□□□□ -0.61
CHRDL2-206ENST00000528789 COX6A2Q02221 97 aa11.24□□□□□ -0.61
CHRDL2-206ENST00000528789 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
CHRDL2-206ENST00000528789 IGHV3-64A0A075B6Q5 118 aa11.23□□□□□ -0.61
CHRDL2-206ENST00000528789 LINC00614P0C842 121 aa11.23□□□□□ -0.61
CHRDL2-206ENST00000528789 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
CHRDL2-206ENST00000528789 ERASQ7Z444 233 aa11.23□□□□□ -0.61
CHRDL2-206ENST00000528789 Q8N1X5 172 aa11.23□□□□□ -0.61
CHRDL2-206ENST00000528789 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
CHRDL2-206ENST00000528789 IGLV4-69A0A075B6H9 119 aa11.22□□□□□ -0.61
CHRDL2-206ENST00000528789 SCO1O75880 301 aa11.22□□□□□ -0.61
CHRDL2-206ENST00000528789 APOMO95445 188 aa11.22□□□□□ -0.61
CHRDL2-206ENST00000528789 PMCHL1Q16048 86 aa11.22□□□□□ -0.61
CHRDL2-206ENST00000528789 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
CHRDL2-206ENST00000528789 SCXQ7RTU7 201 aa11.22□□□□□ -0.61
CHRDL2-206ENST00000528789 A0A096LNJ9 63 aa11.21□□□□□ -0.61
CHRDL2-206ENST00000528789 TRGC2P03986 189 aa11.21□□□□□ -0.61
CHRDL2-206ENST00000528789 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
CHRDL2-206ENST00000528789 ORAOV1Q8WV07 137 aa11.21□□□□□ -0.61
CHRDL2-206ENST00000528789 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
CHRDL2-206ENST00000528789 COLCA2A8K830 154 aa11.2□□□□□ -0.62
CHRDL2-206ENST00000528789 PANO1I0J062 215 aa11.2□□□□□ -0.62
CHRDL2-206ENST00000528789 RAB5BP61020 215 aa11.2□□□□□ -0.62
CHRDL2-206ENST00000528789 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
CHRDL2-206ENST00000528789 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
CHRDL2-206ENST00000528789 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
CHRDL2-206ENST00000528789 SYCNQ0VAF6 134 aa11.19□□□□□ -0.62
CHRDL2-206ENST00000528789 CIRBP-AS1Q8TBR5 109 aa11.19□□□□□ -0.62
CHRDL2-206ENST00000528789 A0A087WZ39 114 aa11.18□□□□□ -0.62
CHRDL2-206ENST00000528789 HBDP02042 147 aa11.18□□□□□ -0.62
CHRDL2-206ENST00000528789 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
CHRDL2-206ENST00000528789 OR10D4PQ8NGN7 298 aa11.18□□□□□ -0.62
CHRDL2-206ENST00000528789 CAMK2N2Q96S95 79 aa11.18□□□□□ -0.62
CHRDL2-206ENST00000528789 A0A0J9YXV3 536 aa11.17□□□□□ -0.62
CHRDL2-206ENST00000528789 Q6ZRU5 148 aa11.17□□□□□ -0.62
CHRDL2-206ENST00000528789 EPM2AB3EWF7 344 aa11.16□□□□□ -0.62
CHRDL2-206ENST00000528789 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.16□□□□□ -0.62
CHRDL2-206ENST00000528789 Q5VSD8 79 aa11.16□□□□□ -0.62
CHRDL2-206ENST00000528789 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
CHRDL2-206ENST00000528789 C2orf48Q96LS8 159 aa11.16□□□□□ -0.62
CHRDL2-206ENST00000528789 CST9LQ9H4G1 147 aa11.16□□□□□ -0.62
CHRDL2-206ENST00000528789 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
CHRDL2-206ENST00000528789 IGKV2-24A0A0C4DH68 120 aa11.15□□□□□ -0.62
CHRDL2-206ENST00000528789 HERVK_113P63121 156 aa11.15□□□□□ -0.62
CHRDL2-206ENST00000528789 PMVKQ15126 192 aa11.15□□□□□ -0.62
CHRDL2-206ENST00000528789 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
CHRDL2-206ENST00000528789 BAGE3Q86Y29 109 aa11.15□□□□□ -0.62
CHRDL2-206ENST00000528789 GEMIN7Q9H840 131 aaKnown RBP11.15□□□□□ -0.62
CHRDL2-206ENST00000528789 NDUFA6P56556 154 aa11.14□□□□□ -0.63
CHRDL2-206ENST00000528789 SEC11AP67812 179 aa11.14□□□□□ -0.63
CHRDL2-206ENST00000528789 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
CHRDL2-206ENST00000528789 DPH3Q96FX2 82 aa11.14□□□□□ -0.63
CHRDL2-206ENST00000528789 CDKN2A-AS1Q9UH64 79 aa11.14□□□□□ -0.63
CHRDL2-206ENST00000528789 LINC00528Q8N1L1 170 aa11.13□□□□□ -0.63
CHRDL2-206ENST00000528789 A0A096LNI7 61 aa11.12□□□□□ -0.63
CHRDL2-206ENST00000528789 FAM229AH3BQW9 127 aa11.12□□□□□ -0.63
CHRDL2-206ENST00000528789 CIRBPQ14011 172 aaKnown RBP11.12□□□□□ -0.63
CHRDL2-206ENST00000528789 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
CHRDL2-206ENST00000528789 LINC00469Q8N7U9 141 aa11.12□□□□□ -0.63
CHRDL2-206ENST00000528789 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
CHRDL2-206ENST00000528789 TINCRA0A1B0GVN0 87 aa11.11□□□□□ -0.63
CHRDL2-206ENST00000528789 KIAA0087Q14695 138 aa11.11□□□□□ -0.63
CHRDL2-206ENST00000528789 MAJINQ3KP22 176 aa11.11□□□□□ -0.63
CHRDL2-206ENST00000528789 C10orf25Q5T742 122 aa11.11□□□□□ -0.63
CHRDL2-206ENST00000528789 PACRGQ96M98 296 aaPredicted RBP11.11□□□□□ -0.63
CHRDL2-206ENST00000528789 TOMM7Q9P0U1 55 aa11.11□□□□□ -0.63
CHRDL2-206ENST00000528789 NDUFA1O15239 70 aa11.1□□□□□ -0.63
CHRDL2-206ENST00000528789 HSBP1O75506 76 aa11.1□□□□□ -0.63
CHRDL2-206ENST00000528789 ATP5LO75964 103 aa11.1□□□□□ -0.63
CHRDL2-206ENST00000528789 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
CHRDL2-206ENST00000528789 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
CHRDL2-206ENST00000528789 A0A087WYN8 130 aa11.09□□□□□ -0.63
CHRDL2-206ENST00000528789 SERF1AO75920 110 aa11.09□□□□□ -0.63
CHRDL2-206ENST00000528789 PRSS2P07478 247 aa11.09□□□□□ -0.63
CHRDL2-206ENST00000528789 GAGE2BQ13066 116 aa11.09□□□□□ -0.63
CHRDL2-206ENST00000528789 C2orf82Q6UX34 121 aa11.09□□□□□ -0.63
CHRDL2-206ENST00000528789 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
CHRDL2-206ENST00000528789 F8WDY8 70 aa11.08□□□□□ -0.64
CHRDL2-206ENST00000528789 LINC00310P59036 64 aa11.08□□□□□ -0.64
CHRDL2-206ENST00000528789 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
CHRDL2-206ENST00000528789 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
CHRDL2-206ENST00000528789 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
CHRDL2-206ENST00000528789 IGLV5-45A0A087WSX0 123 aa11.07□□□□□ -0.64
CHRDL2-206ENST00000528789 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
CHRDL2-206ENST00000528789 SMIM1B2RUZ4 78 aa11.06□□□□□ -0.64
CHRDL2-206ENST00000528789 SPINK8P0C7L1 97 aa11.06□□□□□ -0.64
CHRDL2-206ENST00000528789 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
CHRDL2-206ENST00000528789 PTTG1IPP53801 180 aa11.06□□□□□ -0.64
CHRDL2-206ENST00000528789 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms