RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 SMCO4Q9NRQ5 59 aa11.22□□□□□ -0.61
LTBP3-208ENST00000527339 TEX43Q6ZNM6 134 aa11.21□□□□□ -0.61
LTBP3-208ENST00000527339 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
LTBP3-208ENST00000527339 LINC01549A6NIU2 74 aa11.2□□□□□ -0.62
LTBP3-208ENST00000527339 IGIPA6NJ69 53 aa11.2□□□□□ -0.62
LTBP3-208ENST00000527339 SLPIP03973 132 aa11.2□□□□□ -0.62
LTBP3-208ENST00000527339 MALP21145 153 aa11.2□□□□□ -0.62
LTBP3-208ENST00000527339 Q6ZN92 141 aa11.2□□□□□ -0.62
LTBP3-208ENST00000527339 FA2HQ7L5A8 372 aa11.2□□□□□ -0.62
LTBP3-208ENST00000527339 CBLN2Q8IUK8 224 aa11.2□□□□□ -0.62
LTBP3-208ENST00000527339 TIMM17AQ99595 171 aa11.19□□□□□ -0.62
LTBP3-208ENST00000527339 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
LTBP3-208ENST00000527339 PAPPA-AS1Q5QFB9 102 aa11.18□□□□□ -0.62
LTBP3-208ENST00000527339 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
LTBP3-208ENST00000527339 C18orf32Q8TCD1 76 aa11.18□□□□□ -0.62
LTBP3-208ENST00000527339 AMELXQ99217 191 aa11.18□□□□□ -0.62
LTBP3-208ENST00000527339 VCX2Q9H322 139 aa11.18□□□□□ -0.62
LTBP3-208ENST00000527339 IGHV3-64A0A075B6Q5 118 aa11.17□□□□□ -0.62
LTBP3-208ENST00000527339 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
LTBP3-208ENST00000527339 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
LTBP3-208ENST00000527339 APOMO95445 188 aa11.17□□□□□ -0.62
LTBP3-208ENST00000527339 LINC00173Q6ZV60 143 aa11.17□□□□□ -0.62
LTBP3-208ENST00000527339 ERASQ7Z444 233 aa11.17□□□□□ -0.62
LTBP3-208ENST00000527339 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
LTBP3-208ENST00000527339 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
LTBP3-208ENST00000527339 HMCN2Q8NDA2 5059 aa11.16□□□□□ -0.62
LTBP3-208ENST00000527339 UBR4Q5T4S7 5183 aa11.15□□□□□ -0.62
LTBP3-208ENST00000527339 UBE2D1P51668 147 aa11.15□□□□□ -0.62
LTBP3-208ENST00000527339 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
LTBP3-208ENST00000527339 SCGB3A1Q96QR1 104 aa11.15□□□□□ -0.62
LTBP3-208ENST00000527339 CHAC1Q9BUX1 264 aa11.15□□□□□ -0.62
LTBP3-208ENST00000527339 LINC00614P0C842 121 aa11.14□□□□□ -0.63
LTBP3-208ENST00000527339 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
LTBP3-208ENST00000527339 SCXQ7RTU7 201 aa11.14□□□□□ -0.63
LTBP3-208ENST00000527339 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
LTBP3-208ENST00000527339 RAB5BP61020 215 aa11.13□□□□□ -0.63
LTBP3-208ENST00000527339 OR10D4PQ8NGN7 298 aa11.13□□□□□ -0.63
LTBP3-208ENST00000527339 URB1-AS1Q96HZ7 61 aa11.13□□□□□ -0.63
LTBP3-208ENST00000527339 IGLV4-69A0A075B6H9 119 aa11.12□□□□□ -0.63
LTBP3-208ENST00000527339 A0A087WZ39 114 aa11.12□□□□□ -0.63
LTBP3-208ENST00000527339 COX6A2Q02221 97 aa11.12□□□□□ -0.63
LTBP3-208ENST00000527339 SYCNQ0VAF6 134 aa11.12□□□□□ -0.63
LTBP3-208ENST00000527339 FAM19A3Q7Z5A8 133 aa11.12□□□□□ -0.63
LTBP3-208ENST00000527339 CARD19Q96LW7 228 aa11.12□□□□□ -0.63
LTBP3-208ENST00000527339 SEC11AP67812 179 aa11.11□□□□□ -0.63
LTBP3-208ENST00000527339 SPAG11BQ08648 103 aa11.11□□□□□ -0.63
LTBP3-208ENST00000527339 CIRBP-AS1Q8TBR5 109 aa11.11□□□□□ -0.63
LTBP3-208ENST00000527339 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
LTBP3-208ENST00000527339 ORAOV1Q8WV07 137 aa11.1□□□□□ -0.63
LTBP3-208ENST00000527339 PKIGQ9Y2B9 76 aa11.1□□□□□ -0.63
LTBP3-208ENST00000527339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.1□□□□□ -0.63
LTBP3-208ENST00000527339 A0A096LNJ9 63 aa11.09□□□□□ -0.63
LTBP3-208ENST00000527339 HBDP02042 147 aa11.09□□□□□ -0.63
LTBP3-208ENST00000527339 CIRBPQ14011 172 aaKnown RBP11.09□□□□□ -0.63
LTBP3-208ENST00000527339 LINC01561Q8N1V8 128 aa11.09□□□□□ -0.63
LTBP3-208ENST00000527339 CAMK2N2Q96S95 79 aa11.09□□□□□ -0.63
LTBP3-208ENST00000527339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.08□□□□□ -0.64
LTBP3-208ENST00000527339 FAM229AH3BQW9 127 aa11.08□□□□□ -0.64
LTBP3-208ENST00000527339 PANO1I0J062 215 aa11.08□□□□□ -0.64
LTBP3-208ENST00000527339 HERVK_113P63121 156 aa11.08□□□□□ -0.64
LTBP3-208ENST00000527339 F8WDY8 70 aa11.07□□□□□ -0.64
LTBP3-208ENST00000527339 TRGC2P03986 189 aa11.07□□□□□ -0.64
LTBP3-208ENST00000527339 Q6ZRU5 148 aa11.07□□□□□ -0.64
LTBP3-208ENST00000527339 FAT3Q8TDW7 4589 aa11.06□□□□□ -0.64
LTBP3-208ENST00000527339 COLCA2A8K830 154 aa11.06□□□□□ -0.64
LTBP3-208ENST00000527339 PMVKQ15126 192 aa11.06□□□□□ -0.64
LTBP3-208ENST00000527339 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
LTBP3-208ENST00000527339 CHCHD1Q96BP2 118 aaKnown RBP11.06□□□□□ -0.64
LTBP3-208ENST00000527339 CST9LQ9H4G1 147 aa11.06□□□□□ -0.64
LTBP3-208ENST00000527339 GEMIN7Q9H840 131 aaKnown RBP11.06□□□□□ -0.64
LTBP3-208ENST00000527339 A0A0J9YXV3 536 aa11.05□□□□□ -0.64
LTBP3-208ENST00000527339 CHTF8P0CG12 524 aa11.05□□□□□ -0.64
LTBP3-208ENST00000527339 PMCHL1Q16048 86 aa11.05□□□□□ -0.64
LTBP3-208ENST00000527339 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
LTBP3-208ENST00000527339 TINCRA0A1B0GVN0 87 aa11.04□□□□□ -0.64
LTBP3-208ENST00000527339 NDUFA1O15239 70 aa11.04□□□□□ -0.64
LTBP3-208ENST00000527339 RNF151Q2KHN1 245 aa11.04□□□□□ -0.64
LTBP3-208ENST00000527339 PDZD11Q5EBL8 140 aa11.04□□□□□ -0.64
LTBP3-208ENST00000527339 CDKN2A-AS1Q9UH64 79 aa11.04□□□□□ -0.64
LTBP3-208ENST00000527339 A0A096LNI7 61 aa11.03□□□□□ -0.64
LTBP3-208ENST00000527339 LOC107984640A0A0U1RRK4 108 aa11.03□□□□□ -0.64
LTBP3-208ENST00000527339 J3QL48 77 aa11.03□□□□□ -0.64
LTBP3-208ENST00000527339 ATP5LO75964 103 aa11.03□□□□□ -0.64
LTBP3-208ENST00000527339 KIAA0087Q14695 138 aa11.03□□□□□ -0.64
LTBP3-208ENST00000527339 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
LTBP3-208ENST00000527339 MRPL35Q9NZE8 188 aaKnown RBP11.03□□□□□ -0.64
LTBP3-208ENST00000527339 LINC00474Q9P2X8 69 aa11.03□□□□□ -0.64
LTBP3-208ENST00000527339 IGKV2-24A0A0C4DH68 120 aa11.02□□□□□ -0.65
LTBP3-208ENST00000527339 BAGE3Q86Y29 109 aa11.02□□□□□ -0.65
LTBP3-208ENST00000527339 IGLV5-45A0A087WSX0 123 aa11.01□□□□□ -0.65
LTBP3-208ENST00000527339 A0A087WYN8 130 aa11.01□□□□□ -0.65
LTBP3-208ENST00000527339 MAJINQ3KP22 176 aa11.01□□□□□ -0.65
LTBP3-208ENST00000527339 LINC00469Q8N7U9 141 aa11.01□□□□□ -0.65
LTBP3-208ENST00000527339 PACRGQ96M98 296 aaPredicted RBP11.01□□□□□ -0.65
LTBP3-208ENST00000527339 SCO1O75880 301 aa11□□□□□ -0.65
LTBP3-208ENST00000527339 PLA2G1BP04054 148 aaKnown RBP11□□□□□ -0.65
LTBP3-208ENST00000527339 PLAC8Q9NZF1 115 aa11□□□□□ -0.65
LTBP3-208ENST00000527339 HSBP1O75506 76 aa10.99□□□□□ -0.65
LTBP3-208ENST00000527339 PRSS2P07478 247 aa10.99□□□□□ -0.65
LTBP3-208ENST00000527339 PTTG1IPP53801 180 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms