RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 TRGV3P03979 118 aa8.11□□□□□ -1.11
VPS11-202ENST00000526829 SCGB1D4Q6XE38 83 aa8.11□□□□□ -1.11
VPS11-202ENST00000526829 SACSQ9NZJ4 4579 aa8.11□□□□□ -1.11
VPS11-202ENST00000526829 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
VPS11-202ENST00000526829 CRIP2P52943 208 aaPredicted RBP8.11□□□□□ -1.11
VPS11-202ENST00000526829 SLURP1P55000 103 aa8.11□□□□□ -1.11
VPS11-202ENST00000526829 SLC50A1Q9BRV3 221 aa8.11□□□□□ -1.11
VPS11-202ENST00000526829 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
VPS11-202ENST00000526829 TMEM243Q9BU79 118 aa8.1□□□□□ -1.11
VPS11-202ENST00000526829 IGHV3-11P01762 117 aa8.1□□□□□ -1.11
VPS11-202ENST00000526829 KTN1-AS1Q86SY8 53 aa8.1□□□□□ -1.11
VPS11-202ENST00000526829 IGHV4OR15-8A0A075B7B6 117 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 A0A087WW49 117 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 IGHV7-4-1A0A0J9YVY3 117 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 A0A0J9YY99 117 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 CFC1BP0CG36 223 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 CFC1P0CG37 223 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 C19orf54Q5BKX5 351 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 PAPPA-AS1Q5QFB9 102 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 SFTA2Q6UW10 78 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 MUC7Q8TAX7 377 aa8.09□□□□□ -1.11
VPS11-202ENST00000526829 DNAH1Q9P2D7 4330 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 GHRHP01286 108 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 NDPQ00604 133 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 SS18Q15532 418 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 DCANP1Q8TF63 244 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 METTL26Q96S19 204 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 IGLV11-55A0A075B6I3 123 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 F8W735 103 aaPredicted RBP8.08□□□□□ -1.12
VPS11-202ENST00000526829 H3BUA1 57 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 IGHV3-30P01768 117 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 IGHV3-30-5P0DP03 117 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 FHL2Q14192 279 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 ATXN8Q156A1 80 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 UNQ9165/PRO28630Q6UXU0 137 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 C11orf21Q9P2W6 132 aa8.08□□□□□ -1.12
VPS11-202ENST00000526829 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
VPS11-202ENST00000526829 CASC10Q5T4H9 136 aa8.07□□□□□ -1.12
VPS11-202ENST00000526829 SLC25A29Q8N8R3 303 aa8.07□□□□□ -1.12
VPS11-202ENST00000526829 FANCD2OSQ96PS1 177 aa8.07□□□□□ -1.12
VPS11-202ENST00000526829 X6R8D5 127 aa8.07□□□□□ -1.12
VPS11-202ENST00000526829 TIMM17BO60830 172 aa8.06□□□□□ -1.12
VPS11-202ENST00000526829 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
VPS11-202ENST00000526829 SPANXN1Q5VSR9 72 aa8.06□□□□□ -1.12
VPS11-202ENST00000526829 C2orf66Q6UXQ4 117 aa8.06□□□□□ -1.12
VPS11-202ENST00000526829 TENM2Q9NT68 2774 aa8.06□□□□□ -1.12
VPS11-202ENST00000526829 PRAC2D3DTV9 90 aa8.06□□□□□ -1.12
VPS11-202ENST00000526829 M0R381 172 aa8.06□□□□□ -1.12
VPS11-202ENST00000526829 IGFL4Q6B9Z1 124 aa8.06□□□□□ -1.12
VPS11-202ENST00000526829 C11orf68Q9H3H3 251 aaKnown RBP8.06□□□□□ -1.12
VPS11-202ENST00000526829 LGALS3P17931 250 aaKnown RBP8.05□□□□□ -1.12
VPS11-202ENST00000526829 C6orf223Q8N319 242 aa8.05□□□□□ -1.12
VPS11-202ENST00000526829 S4R3C0 116 aa8.05□□□□□ -1.12
VPS11-202ENST00000526829 TRBV7-1A0A0A6YYK4 115 aa8.04□□□□□ -1.12
VPS11-202ENST00000526829 LYRM9A8MSI8 78 aa8.04□□□□□ -1.12
VPS11-202ENST00000526829 VCYO14598 125 aa8.04□□□□□ -1.12
VPS11-202ENST00000526829 ZNF22P17026 224 aaPredicted RBP8.04□□□□□ -1.12
VPS11-202ENST00000526829 USMG5Q96IX5 58 aa8.04□□□□□ -1.12
VPS11-202ENST00000526829 Q9H8V8 135 aa8.04□□□□□ -1.12
VPS11-202ENST00000526829 PPP1R17O96001 155 aa8.04□□□□□ -1.12
VPS11-202ENST00000526829 IGLV1-51P01701 117 aa8.04□□□□□ -1.12
VPS11-202ENST00000526829 LYSTQ99698 3801 aa8.04□□□□□ -1.12
VPS11-202ENST00000526829 IGLV4-69A0A075B6H9 119 aa8.03□□□□□ -1.12
VPS11-202ENST00000526829 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
VPS11-202ENST00000526829 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
VPS11-202ENST00000526829 IGHV3-33P01772 117 aa8.03□□□□□ -1.12
VPS11-202ENST00000526829 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.03□□□□□ -1.12
VPS11-202ENST00000526829 STARD9Q9P2P6 4700 aa8.03□□□□□ -1.12
VPS11-202ENST00000526829 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
VPS11-202ENST00000526829 CTSGP08311 255 aa8.02□□□□□ -1.12
VPS11-202ENST00000526829 IGHV4-30-4P0DP06 118 aa8.02□□□□□ -1.12
VPS11-202ENST00000526829 CSMD3Q7Z407 3707 aa8.02□□□□□ -1.13
VPS11-202ENST00000526829 NDUFS5O43920 106 aa8.02□□□□□ -1.13
VPS11-202ENST00000526829 CCKP06307 115 aa8.02□□□□□ -1.13
VPS11-202ENST00000526829 DAD1P61803 113 aa8.02□□□□□ -1.13
VPS11-202ENST00000526829 C2orf82Q6UX34 121 aa8.02□□□□□ -1.13
VPS11-202ENST00000526829 C9orf47Q6ZRZ4 202 aa8.02□□□□□ -1.13
VPS11-202ENST00000526829 TMEM263Q8WUH6 116 aaKnown RBP8.02□□□□□ -1.13
VPS11-202ENST00000526829 BIRC6Q9NR09 4857 aa8.01□□□□□ -1.13
VPS11-202ENST00000526829 TMEM141Q96I45 108 aa8.01□□□□□ -1.13
VPS11-202ENST00000526829 C19orf73Q9NVV2 129 aa8.01□□□□□ -1.13
VPS11-202ENST00000526829 LCE6AA0A183 80 aa8.01□□□□□ -1.13
VPS11-202ENST00000526829 AMELXQ99217 191 aa8.01□□□□□ -1.13
VPS11-202ENST00000526829 LENEPQ9Y5L5 61 aa8.01□□□□□ -1.13
VPS11-202ENST00000526829 TRAV16A0A0A6YYK6 109 aaPredicted RBP8□□□□□ -1.13
VPS11-202ENST00000526829 FAM223BA6NKX1 122 aa8□□□□□ -1.13
VPS11-202ENST00000526829 MED14OSP0DP75 135 aa8□□□□□ -1.13
VPS11-202ENST00000526829 FAM223AQ8IWN6 122 aa8□□□□□ -1.13
VPS11-202ENST00000526829 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
VPS11-202ENST00000526829 RPL39LQ96EH5 51 aaKnown RBP8□□□□□ -1.13
VPS11-202ENST00000526829 TRBV27A0A0K0K1C4 114 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 IGIPA6NJ69 53 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 TSHBP01222 138 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 TSPEAR-AS2P59090 65 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 DYNLRB2Q8TF09 96 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 LINC00474Q9P2X8 69 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 TRBV30A0A0K0K1B3 111 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 M0R378 163 aa7.99□□□□□ -1.13
VPS11-202ENST00000526829 IGHV3-23P01764 117 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms