RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
LINC01001-201ENST00000526704 JMJD1CQ15652 2540 aa8.3□□□□□ -1.08
LINC01001-201ENST00000526704 F5H768 121 aa8.3□□□□□ -1.08
LINC01001-201ENST00000526704 CCL24O00175 119 aa8.3□□□□□ -1.08
LINC01001-201ENST00000526704 SOSTDC1Q6X4U4 206 aa8.3□□□□□ -1.08
LINC01001-201ENST00000526704 TRAV8-4A0A0B4J246 113 aa8.29□□□□□ -1.08
LINC01001-201ENST00000526704 A0A0U1RRA0 63 aa8.29□□□□□ -1.08
LINC01001-201ENST00000526704 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
LINC01001-201ENST00000526704 NIPBLQ6KC79 2804 aaeCLIP8.29□□□□□ -1.08
LINC01001-201ENST00000526704 ZNF843Q8N446 348 aa8.29□□□□□ -1.08
LINC01001-201ENST00000526704 ESM1Q9NQ30 184 aa8.29□□□□□ -1.08
LINC01001-201ENST00000526704 FLNAP21333 2647 aaKnown RBP8.29□□□□□ -1.08
LINC01001-201ENST00000526704 GIG44P09565 113 aaPredicted RBP8.28□□□□□ -1.08
LINC01001-201ENST00000526704 NOP10Q9NPE3 64 aaKnown RBP8.28□□□□□ -1.08
LINC01001-201ENST00000526704 PLAC8L1A1L4L8 177 aa8.28□□□□□ -1.08
LINC01001-201ENST00000526704 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
LINC01001-201ENST00000526704 C15orf53Q8NAA6 179 aa8.28□□□□□ -1.08
LINC01001-201ENST00000526704 PRIMA1Q86XR5 153 aa8.27□□□□□ -1.09
LINC01001-201ENST00000526704 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
LINC01001-201ENST00000526704 C2CD3Q4AC94 2353 aa8.26□□□□□ -1.09
LINC01001-201ENST00000526704 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
LINC01001-201ENST00000526704 DEFB121Q5J5C9 76 aa8.26□□□□□ -1.09
LINC01001-201ENST00000526704 MEIG1Q5JSS6 88 aa8.26□□□□□ -1.09
LINC01001-201ENST00000526704 SETD2Q9BYW2 2564 aaPredicted RBP8.25□□□□□ -1.09
LINC01001-201ENST00000526704 LOC100131303A0A0U1RQF7 123 aa8.25□□□□□ -1.09
LINC01001-201ENST00000526704 WFDC11Q8NEX6 87 aa8.25□□□□□ -1.09
LINC01001-201ENST00000526704 TMEM243Q9BU79 118 aa8.25□□□□□ -1.09
LINC01001-201ENST00000526704 COX7A2LO14548 114 aa8.25□□□□□ -1.09
LINC01001-201ENST00000526704 UBE2L6O14933 153 aa8.25□□□□□ -1.09
LINC01001-201ENST00000526704 COPS9Q8WXC6 57 aa8.25□□□□□ -1.09
LINC01001-201ENST00000526704 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
LINC01001-201ENST00000526704 FAM240AA0A1B0GVK7 77 aa8.24□□□□□ -1.09
LINC01001-201ENST00000526704 CCDC168Q8NDH2 2452 aa8.24□□□□□ -1.09
LINC01001-201ENST00000526704 TMEM126AQ9H061 195 aa8.23□□□□□ -1.09
LINC01001-201ENST00000526704 RPL35AP18077 110 aaKnown RBP8.23□□□□□ -1.09
LINC01001-201ENST00000526704 C19orf73Q9NVV2 129 aa8.23□□□□□ -1.09
LINC01001-201ENST00000526704 TRGV2A0A075B6R0 118 aa8.22□□□□□ -1.09
LINC01001-201ENST00000526704 CSNK1G2-AS1Q8NCQ2 148 aa8.22□□□□□ -1.09
LINC01001-201ENST00000526704 PPDPFQ9H3Y8 114 aa8.22□□□□□ -1.09
LINC01001-201ENST00000526704 TRBV6-4A0A1B0GX49 114 aa8.21□□□□□ -1.09
LINC01001-201ENST00000526704 LINC01006Q8NI28 216 aa8.21□□□□□ -1.09
LINC01001-201ENST00000526704 OVOL2Q9BRP0 275 aa8.21□□□□□ -1.09
LINC01001-201ENST00000526704 IGLV1-51P01701 117 aa8.21□□□□□ -1.1
LINC01001-201ENST00000526704 PLA2G2AP14555 144 aa8.21□□□□□ -1.1
LINC01001-201ENST00000526704 CMC4P56277 68 aaPredicted RBP8.21□□□□□ -1.1
LINC01001-201ENST00000526704 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
LINC01001-201ENST00000526704 IGLV4-60A0A075B6I1 120 aa8.19□□□□□ -1.1
LINC01001-201ENST00000526704 TRGV4A0A0C4DH28 118 aa8.19□□□□□ -1.1
LINC01001-201ENST00000526704 FAM218AQ96MZ4 157 aa8.19□□□□□ -1.1
LINC01001-201ENST00000526704 TRBV7-7A0A0K0K1E9 115 aa8.19□□□□□ -1.1
LINC01001-201ENST00000526704 TRACP01848 142 aa8.19□□□□□ -1.1
LINC01001-201ENST00000526704 ACYP1P07311 99 aa8.19□□□□□ -1.1
LINC01001-201ENST00000526704 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
LINC01001-201ENST00000526704 C16orf95Q9H693 158 aa8.19□□□□□ -1.1
LINC01001-201ENST00000526704 IGKV3OR2-268A0A0C4DH90 116 aa8.18□□□□□ -1.1
LINC01001-201ENST00000526704 FHL2Q14192 279 aa8.18□□□□□ -1.1
LINC01001-201ENST00000526704 TRBV6-8A0A0A6YYG3 113 aa8.18□□□□□ -1.1
LINC01001-201ENST00000526704 RNASE1P07998 156 aaKnown RBP8.18□□□□□ -1.1
LINC01001-201ENST00000526704 MIR7-3HGQ8N6C7 128 aa8.18□□□□□ -1.1
LINC01001-201ENST00000526704 LINC00337Q8N6G1 96 aa8.18□□□□□ -1.1
LINC01001-201ENST00000526704 CHCHD5Q9BSY4 110 aa8.18□□□□□ -1.1
LINC01001-201ENST00000526704 C22orf24Q9Y442 160 aa8.18□□□□□ -1.1
LINC01001-201ENST00000526704 FAM222AQ5U5X8 452 aa8.17□□□□□ -1.1
LINC01001-201ENST00000526704 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
LINC01001-201ENST00000526704 PDZD2O15018 2839 aa8.17□□□□□ -1.1
LINC01001-201ENST00000526704 ACANP16112 2415 aa8.17□□□□□ -1.1
LINC01001-201ENST00000526704 TENM4Q6N022 2769 aa8.17□□□□□ -1.1
LINC01001-201ENST00000526704 IGKV2-28A0A075B6P5 120 aa8.17□□□□□ -1.1
LINC01001-201ENST00000526704 IGKV2D-28P01615 120 aa8.17□□□□□ -1.1
LINC01001-201ENST00000526704 MTORP42345 2549 aa8.17□□□□□ -1.1
LINC01001-201ENST00000526704 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
LINC01001-201ENST00000526704 CRPP02741 224 aa8.16□□□□□ -1.1
LINC01001-201ENST00000526704 IMUPQ9GZP8 106 aa8.16□□□□□ -1.1
LINC01001-201ENST00000526704 TRAV13-2A0A0B4J235 113 aa8.16□□□□□ -1.1
LINC01001-201ENST00000526704 HIST2H2BCQ6DN03 193 aa8.16□□□□□ -1.1
LINC01001-201ENST00000526704 PF4P02776 101 aa8.16□□□□□ -1.1
LINC01001-201ENST00000526704 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
LINC01001-201ENST00000526704 SND1-IT1Q9HBX3 110 aa8.16□□□□□ -1.1
LINC01001-201ENST00000526704 BAALC-AS2P0C853 105 aa8.15□□□□□ -1.1
LINC01001-201ENST00000526704 A0A087WZ39 114 aa8.14□□□□□ -1.11
LINC01001-201ENST00000526704 CCL18P55774 89 aa8.14□□□□□ -1.11
LINC01001-201ENST00000526704 LINC00158P58513 81 aa8.14□□□□□ -1.11
LINC01001-201ENST00000526704 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
LINC01001-201ENST00000526704 C5orf38Q86SI9 138 aa8.13□□□□□ -1.11
LINC01001-201ENST00000526704 C3orf56Q8N813 242 aa8.13□□□□□ -1.11
LINC01001-201ENST00000526704 Q9HAA7 133 aa8.13□□□□□ -1.11
LINC01001-201ENST00000526704 GCN1Q92616 2671 aaKnown RBP8.12□□□□□ -1.11
LINC01001-201ENST00000526704 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
LINC01001-201ENST00000526704 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
LINC01001-201ENST00000526704 IBA57-AS1B1ANH7 110 aa8.12□□□□□ -1.11
LINC01001-201ENST00000526704 SMIM11BQ8TCY0 68 aa8.12□□□□□ -1.11
LINC01001-201ENST00000526704 LINC00959A0A1B0GUT2 108 aa8.12□□□□□ -1.11
LINC01001-201ENST00000526704 DEFB130BP0DP73 79 aa8.12□□□□□ -1.11
LINC01001-201ENST00000526704 DEFB130AP0DP74 79 aa8.12□□□□□ -1.11
LINC01001-201ENST00000526704 FN1P02751 2386 aaKnown RBP8.11□□□□□ -1.11
LINC01001-201ENST00000526704 A0A087WYN8 130 aa8.11□□□□□ -1.11
LINC01001-201ENST00000526704 C3orf22Q8N5N4 141 aa8.11□□□□□ -1.11
LINC01001-201ENST00000526704 LINC00612Q8N6U2 182 aa8.11□□□□□ -1.11
LINC01001-201ENST00000526704 MALP21145 153 aa8.11□□□□□ -1.11
LINC01001-201ENST00000526704 PFN2P35080 140 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms