RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 RHOGP84095 191 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 HSD52Q0P140 79 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 Q5BKY6 102 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 FP248Q71RG6 208 aaPredicted RBP1.67□□□□□ -2.14
CD44-223ENST00000526553 ATOH7Q8N100 152 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 MORN4Q8NDC4 146 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 VSTM2AQ8TAG5 236 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 THEM6Q8WUY1 208 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 PPP1R1CQ8WVI7 109 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 MGST2Q99735 147 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 EFCAB11Q9BUY7 163 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 SNHG12Q9BXW3 62 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 PROK2Q9HC23 129 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 MANBALQ9NQG1 85 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 GNG13Q9P2W3 67 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 UFC1Q9Y3C8 167 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 IER3IP1Q9Y5U9 82 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 SORL1Q92673 2214 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 KMT2CQ8NEZ4 4911 aaKnown RBP1.67□□□□□ -2.14
CD44-223ENST00000526553 BIRC6Q9NR09 4857 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 TRBV20-1A0A075B6N2 111 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 FAM24AA6NFZ4 105 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 LINC01549A6NIU2 74 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 ZNF727A8MUV8 499 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 H3BQ15 152 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 H3BRM9 83 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 J3KT08 172 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 GEMIN2O14893 280 aaKnown RBP1.66□□□□□ -2.14
CD44-223ENST00000526553 TAX1BP3O14907 124 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 GNG7O60262 68 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 TRGC2P03986 189 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 ACYP1P07311 99 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 IFITM1P13164 125 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 RNASE4P34096 147 aaKnown RBP1.66□□□□□ -2.14
CD44-223ENST00000526553 HIST1H1AQ02539 215 aaPredicted RBP1.66□□□□□ -2.14
CD44-223ENST00000526553 SPATA45Q537H7 98 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 SMIM20Q8N5G0 67 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 TTC9CQ8N5M4 171 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 ZNF418Q8TF45 676 aaPredicted RBP1.66□□□□□ -2.14
CD44-223ENST00000526553 PP6455Q8WZ26 134 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 AQP3Q92482 292 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 TEX37Q96LM6 180 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 LINC00467Q9BRT7 94 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 SMIM3Q9BZL3 60 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 JPT1Q9UK76 154 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 CHCHD2Q9Y6H1 151 aaPredicted RBP1.66□□□□□ -2.14
CD44-223ENST00000526553 VWFP04275 2813 aa1.66□□□□□ -2.14
CD44-223ENST00000526553 IGKV1D-42A0A075B6H8 117 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 TRBV6-7A0A0A0MS04 114 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 TRAV1-1A0A0B4J248 108 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 TRAV5A0A0B4J249 113 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 RER1O15258 196 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 COX6CP09669 75 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 SPINK8P0C7L1 97 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 SSR2P43308 183 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 EFNA4P52798 201 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 CAV3P56539 151 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 Q0VG73 95 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 C12orf73Q69YU5 71 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 C10orf111Q8N326 155 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 NUP35Q8NFH5 326 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 OR5D14Q8NGL3 314 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 ATP6V0E2Q8NHE4 81 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 C10orf105Q8TEF2 133 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 MUCL1Q96DR8 90 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 SMIM7Q9BQ49 75 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 NAA38Q9BRA0 125 aaKnown RBP1.65□□□□□ -2.15
CD44-223ENST00000526553 SLC50A1Q9BRV3 221 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 NAA60Q9H7X0 242 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 CBLN4Q9NTU7 201 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 SS18L2Q9UHA2 77 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 ERG28Q9UKR5 140 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 LY96Q9Y6Y9 160 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 ARL2-SNX15V9GYD0 113 aa1.65□□□□□ -2.15
CD44-223ENST00000526553 A0A096LNT2 108 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 TRBV6-5A0A0K0K1A5 114 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 A0A1B0GX51 115 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 J3QLW9 94 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 CCL25O15444 150 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 LYZL6O75951 148 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 DPM2O94777 84 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 SFT2D2O95562 160 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 OR2H2O95918 312 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 IGF2P01344 180 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 ASAH2BP0C7U1 165 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 IGLC2P0DOY2 106 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 IGLC3P0DOY3 106 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 DSCR4P56555 118 aaPredicted RBP1.64□□□□□ -2.15
CD44-223ENST00000526553 UBE2BP63146 152 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 RPL38P63173 70 aaKnown RBP1.64□□□□□ -2.15
CD44-223ENST00000526553 C5orf17Q8NAS9 161 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.64□□□□□ -2.15
CD44-223ENST00000526553 ZNF563Q8TA94 476 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 FAM213BQ8TBF2 198 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 CHCHD1Q96BP2 118 aaKnown RBP1.64□□□□□ -2.15
CD44-223ENST00000526553 ZNF625Q96I27 306 aaPredicted RBP1.64□□□□□ -2.15
CD44-223ENST00000526553 Q96M85 177 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 PRADC1Q9BSG0 188 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 BPESC1Q9GZL8 116 aa1.64□□□□□ -2.15
CD44-223ENST00000526553 LPAR5Q9H1C0 372 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms