RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, human

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRK1-205	ENST00000526457	MBD6	Q96DN6	1003 aa		5.79	□□□□□ -1.48
LRRK1-205	ENST00000526457	SPINK6	Q6UWN8	80 aa		5.79	□□□□□ -1.48
LRRK1-205	ENST00000526457	LINC00269	Q8N2A0	174 aa		5.79	□□□□□ -1.48
LRRK1-205	ENST00000526457	AJUBA	Q96IF1	538 aa		5.79	□□□□□ -1.48
LRRK1-205	ENST00000526457	DHRS4-AS1	Q9P1J3	65 aa		5.79	□□□□□ -1.48
LRRK1-205	ENST00000526457	CR1	P17927	2039 aa		5.79	□□□□□ -1.48
LRRK1-205	ENST00000526457		Q6ZVQ6	151 aa		5.79	□□□□□ -1.48
LRRK1-205	ENST00000526457	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	UBE2D4	Q9Y2X8	147 aa		5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457		Q6ZS46	218 aa		5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	RPS28	P62857	69 aa	Known RBP	5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	NTM-AS1	Q6ZSK4	140 aa		5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	ZNF80	P51504	273 aa	Predicted RBP	5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	ZNF503-AS2	A6NEH8	195 aa		5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	PRSS33	Q8NF86	280 aa		5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	TEP1	Q99973	2627 aa	Known RBP	5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	REG3A	Q06141	175 aa		5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457		Q8N3U1	123 aa		5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	C14orf177	Q52M58	125 aa		5.78	□□□□□ -1.48
LRRK1-205	ENST00000526457	NBEAL1	Q6ZS30	2694 aa		5.77	□□□□□ -1.49
LRRK1-205	ENST00000526457	ZNF73	O43830	326 aa	Predicted RBP	5.77	□□□□□ -1.49
LRRK1-205	ENST00000526457	ZNF524	Q96C55	264 aa		5.77	□□□□□ -1.49
LRRK1-205	ENST00000526457		A0A087WZ39	114 aa		5.77	□□□□□ -1.49
LRRK1-205	ENST00000526457	RNF185	Q96GF1	192 aa		5.77	□□□□□ -1.49
LRRK1-205	ENST00000526457	CFAP46	Q8IYW2	2715 aa		5.77	□□□□□ -1.49
LRRK1-205	ENST00000526457	SPINT4	Q6UDR6	99 aa		5.77	□□□□□ -1.49
LRRK1-205	ENST00000526457	LINC00574	Q9H8X3	128 aa		5.77	□□□□□ -1.49
LRRK1-205	ENST00000526457	EDN2	P20800	178 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	IGF2-AS	Q6U949	168 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	ODF3	Q96PU9	254 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	FSTL3	O95633	263 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	UBE2D3	P61077	147 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	ITPR3	Q14573	2671 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	STAB1	Q9NY15	2570 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	C11orf53	Q8IXP5	236 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	PLAC8L1	A1L4L8	177 aa		5.76	□□□□□ -1.49
LRRK1-205	ENST00000526457	DEFB4A	O15263	64 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	HELZ2	Q9BYK8	2649 aa	Known RBP	5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	TRBV10-3	A0A0K0K1G6	114 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457		H0Y9P7	68 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457		P0C879	139 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	CDIP1	Q9H305	208 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	IGF1	P05019	195 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457		A0A0J9YX75	114 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	IGLV2-14	P01704	120 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	MYCNOS	P40205	109 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	FLNA	P21333	2647 aa	Known RBP	5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	C8orf87	E5RJ46	101 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457		K7EMT4	169 aa		5.75	□□□□□ -1.49
LRRK1-205	ENST00000526457	PCOTH	Q58A44	107 aa		5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	DEFB135	Q30KP9	77 aa		5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457		M0QY20	66 aa		5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	RNASE3	P12724	160 aa	Known RBP	5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	PRO0255	Q9UI72	69 aa		5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	SETX	Q7Z333	2677 aa	Known RBP	5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	IGKV2-28	A0A075B6P5	120 aa		5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	IGKV2D-28	P01615	120 aa		5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	CRIP2	P52943	208 aa	Predicted RBP	5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	RPL28	P46779	137 aa	Known RBP	5.74	□□□□□ -1.49
LRRK1-205	ENST00000526457	GPHB5	Q86YW7	130 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	ZNF843	Q8N446	348 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	LINC00310	P59036	64 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	C9orf66	Q5T8R8	295 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457		Q8N814	137 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	C5orf56	Q8N8D9	126 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	EP400	Q96L91	3159 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	PLA2G5	P39877	138 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	HILS1	P60008	231 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	LINC01547	P58512	204 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	CTSZ	Q9UBR2	303 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457		M0R378	163 aa		5.73	□□□□□ -1.49
LRRK1-205	ENST00000526457	UBE2D1	P51668	147 aa		5.72	□□□□□ -1.49
LRRK1-205	ENST00000526457	CD164L2	Q6UWJ8	174 aa		5.72	□□□□□ -1.49
LRRK1-205	ENST00000526457		E7EUB6	86 aa		5.72	□□□□□ -1.49
LRRK1-205	ENST00000526457	TSHB	P01222	138 aa		5.72	□□□□□ -1.49
LRRK1-205	ENST00000526457		Q96MF0	132 aa		5.72	□□□□□ -1.49
LRRK1-205	ENST00000526457		H3BS24	57 aa		5.72	□□□□□ -1.49
LRRK1-205	ENST00000526457	MAP1A	P78559	2803 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRK1-205	ENST00000526457	MUC7	Q8TAX7	377 aa		5.72	□□□□□ -1.49
LRRK1-205	ENST00000526457	CRIP1	P50238	77 aa		5.71	□□□□□ -1.49
LRRK1-205	ENST00000526457		Q6ZTI0	123 aa		5.71	□□□□□ -1.49
LRRK1-205	ENST00000526457		X6R8D5	127 aa		5.71	□□□□□ -1.5
LRRK1-205	ENST00000526457	hDV103S1	A0JD37	113 aa		5.71	□□□□□ -1.5
LRRK1-205	ENST00000526457	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.71	□□□□□ -1.5
LRRK1-205	ENST00000526457	COX17	Q14061	63 aa		5.71	□□□□□ -1.5
LRRK1-205	ENST00000526457	UNQ9165/PRO28630	Q6UXU0	137 aa		5.71	□□□□□ -1.5
LRRK1-205	ENST00000526457	SPINK1	P00995	79 aa		5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457	IGFL2	Q6UWQ7	119 aa		5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457		A0A087WYN8	130 aa		5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457	LOC100131303	A0A0U1RQF7	123 aa		5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457	SPRN	Q5BIV9	151 aa		5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457	C1orf137	Q5JT78	98 aa		5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457	ZNF295-AS1	Q8N0V1	137 aa		5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457	STAB2	Q8WWQ8	2551 aa		5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457	TNFRSF13B	O14836	293 aa	Predicted RBP	5.7	□□□□□ -1.5
LRRK1-205	ENST00000526457	RETNLB	Q9BQ08	111 aa		5.69	□□□□□ -1.5
LRRK1-205	ENST00000526457		Q9UF83	564 aa		5.69	□□□□□ -1.5
LRRK1-205	ENST00000526457	CHD6	Q8TD26	2715 aa		5.69	□□□□□ -1.5

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