RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SPINK9Q5DT21 86 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 TOMM5Q8N4H5 51 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 TP53AIP1Q9HCN2 124 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 CPS1P31327 1500 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 URB2Q14146 1524 aaKnown RBP0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 LAMB2P55268 1798 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 SCN3AQ9NY46 2000 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 KNDC1Q76NI1 1749 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 CCDC88BA6NC98 1476 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 MED14O60244 1454 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 LRRC9Q6ZRR7 1453 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 RALGAPBQ86X10 1494 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 NRXN1Q9ULB1 1477 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 MYH7BA7E2Y1 1941 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 MYH13Q9UKX3 1938 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 QRICH2Q9H0J4 1663 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 ANK1P16157 1881 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 PLXNA3P51805 1871 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 TRPM7Q96QT4 1865 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 LRRC37A3O60309 1634 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 SMARCA4P51532 1647 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 PHIPQ8WWQ0 1821 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 VWDEQ8N2E2 1590 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 UBR2Q8IWV8 1755 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 MYH9P35579 1960 aaKnown RBP0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 EML6Q6ZMW3 1958 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 CUX1P39880 1505 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 HMGXB3Q12766 1538 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 MAGI3Q5TCQ9 1506 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 ZMYM4Q5VZL5 1548 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 LMTK2Q8IWU2 1503 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 LRRC7Q96NW7 1537 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 ABCA3Q99758 1704 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 KIAA1551Q9HCM1 1747 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 C10orf142B7Z368 130 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 K7EMI3 77 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 SPINK4O60575 86 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 Q8IZM0 81 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 DEFB105AQ8NG35 78 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 LINC00846Q9NV44 126 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 NKTRP30414 1462 aaKnown RBP0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 C1orf167Q5SNV9 1468 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 BCL9LQ86UU0 1499 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 TOPAZ1Q8N9V7 1692 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 CITO14578 2027 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 HEATR5AQ86XA9 2040 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 SCN11AQ9UI33 1791 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 DNMBPQ6XZF7 1577 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 SETBP1Q9Y6X0 1596 aa0.45□□□□□ -2.34
ECHDC1-219ENST00000526299 MYH6P13533 1939 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 MYLKQ15746 1914 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 ATG2AQ2TAZ0 1938 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 CEP192Q8TEP8 1941 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 CHD1O14646 1710 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 NRXN2Q9P2S2 1712 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 ANKRD26Q9UPS8 1709 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 EFCAB5A4FU69 1503 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 SBF1O95248 1867 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 SDK1Q7Z5N4 2213 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 FANCAO15360 1455 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 FANCMQ8IYD8 2048 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 SIP14410 1827 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 PARP14Q460N5 1801 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 SBF2Q86WG5 1849 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 LINC00959A0A1B0GUT2 108 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 ETDCA0A1B0GVM5 59 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 SNRPGP15A8MWD9 76 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 G3V318 75 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 CCL22O00626 93 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 NDUFA3O95167 84 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 PLNP26678 52 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 RPL37P61927 97 aaKnown RBP0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 DEFB121Q5J5C9 76 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 MINOS1Q5TGZ0 78 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 SPATA8Q6RVD6 105 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 PRO3102Q9H379 93 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 CDKN2A-AS1Q9UH64 79 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 MCM3APO60318 1980 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 PTPRBP23467 1997 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 MUC22E2RYF6 1773 aaPredicted RBP0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 HEATR1Q9H583 2144 aaKnown RBP0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 MYOFQ9NZM1 2061 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 HEATR5BQ9P2D3 2071 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 PEAK1Q9H792 1746 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 DOCK1Q14185 1865 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 PLXNA4Q9HCM2 1894 aa0.44□□□□□ -2.34
ECHDC1-219ENST00000526299 FN1P02751 2386 aaKnown RBP0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 CDK13Q14004 1512 aaKnown RBP0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 KCPQ6ZWJ8 1503 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 MICAL3Q7RTP6 2002 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 E9PCH4 1651 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 MALRD1Q5VYJ5 2156 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 KIAA1549LQ6ZVL6 1849 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 PRXQ9BXM0 1461 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 MROH1Q8NDA8 1641 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 MAP3K4Q9Y6R4 1608 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 STRCP1A6NGW2 1772 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 RGPD4Q7Z3J3 1758 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 NOTCH1P46531 2555 aa0.43□□□□□ -2.34
ECHDC1-219ENST00000526299 COX6B1P14854 86 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms