RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 LINC00242Q5T6M2 205 aa11.11□□□□□ -0.63
PKP3-203ENST00000525642 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
PKP3-203ENST00000525642 AP5S1Q9NUS5 200 aa11.11□□□□□ -0.63
PKP3-203ENST00000525642 SDIM1Q6ZPB5 146 aa11.1□□□□□ -0.63
PKP3-203ENST00000525642 HIGD2BQ4VC39 106 aa11.09□□□□□ -0.63
PKP3-203ENST00000525642 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
PKP3-203ENST00000525642 ZC2HC1BQ5TFG8 222 aa11.09□□□□□ -0.63
PKP3-203ENST00000525642 Q6ZN92 141 aa11.09□□□□□ -0.63
PKP3-203ENST00000525642 VCX2Q9H322 139 aa11.09□□□□□ -0.63
PKP3-203ENST00000525642 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.08□□□□□ -0.64
PKP3-203ENST00000525642 COX6A2Q02221 97 aa11.08□□□□□ -0.64
PKP3-203ENST00000525642 C5orf38Q86SI9 138 aa11.08□□□□□ -0.64
PKP3-203ENST00000525642 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
PKP3-203ENST00000525642 A0A087WZ39 114 aa11.07□□□□□ -0.64
PKP3-203ENST00000525642 RAB5BP61020 215 aa11.07□□□□□ -0.64
PKP3-203ENST00000525642 LINC01561Q8N1V8 128 aa11.07□□□□□ -0.64
PKP3-203ENST00000525642 Q8N1X5 172 aa11.07□□□□□ -0.64
PKP3-203ENST00000525642 C2orf88Q9BSF0 95 aa11.07□□□□□ -0.64
PKP3-203ENST00000525642 FAT1Q14517 4588 aa11.07□□□□□ -0.64
PKP3-203ENST00000525642 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
PKP3-203ENST00000525642 TRGC2P03986 189 aa11.06□□□□□ -0.64
PKP3-203ENST00000525642 MALP21145 153 aa11.06□□□□□ -0.64
PKP3-203ENST00000525642 CIRBPQ14011 172 aaKnown RBP11.06□□□□□ -0.64
PKP3-203ENST00000525642 APOMO95445 188 aa11.05□□□□□ -0.64
PKP3-203ENST00000525642 PDZD11Q5EBL8 140 aa11.05□□□□□ -0.64
PKP3-203ENST00000525642 OR10D4PQ8NGN7 298 aa11.05□□□□□ -0.64
PKP3-203ENST00000525642 C2orf48Q96LS8 159 aa11.05□□□□□ -0.64
PKP3-203ENST00000525642 VPS13BQ7Z7G8 4022 aa11.05□□□□□ -0.64
PKP3-203ENST00000525642 ZNF561-AS1K7EIQ3 104 aa11.04□□□□□ -0.64
PKP3-203ENST00000525642 CHCHD1Q96BP2 118 aaKnown RBP11.04□□□□□ -0.64
PKP3-203ENST00000525642 LINC00526Q96FQ7 95 aa11.04□□□□□ -0.64
PKP3-203ENST00000525642 CHAC1Q9BUX1 264 aa11.04□□□□□ -0.64
PKP3-203ENST00000525642 IGLV4-69A0A075B6H9 119 aa11.03□□□□□ -0.64
PKP3-203ENST00000525642 HBDP02042 147 aa11.03□□□□□ -0.64
PKP3-203ENST00000525642 KRTAP4-5Q9BYR2 181 aa11.03□□□□□ -0.64
PKP3-203ENST00000525642 F8WDY8 70 aa11.02□□□□□ -0.65
PKP3-203ENST00000525642 SCO1O75880 301 aa11.02□□□□□ -0.65
PKP3-203ENST00000525642 SEC11AP67812 179 aa11.02□□□□□ -0.65
PKP3-203ENST00000525642 KIAA0087Q14695 138 aa11.02□□□□□ -0.65
PKP3-203ENST00000525642 SCXQ7RTU7 201 aa11.02□□□□□ -0.65
PKP3-203ENST00000525642 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
PKP3-203ENST00000525642 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
PKP3-203ENST00000525642 PANO1I0J062 215 aa11.01□□□□□ -0.65
PKP3-203ENST00000525642 HERVK_113P63121 156 aa11.01□□□□□ -0.65
PKP3-203ENST00000525642 HAMPP81172 84 aa11.01□□□□□ -0.65
PKP3-203ENST00000525642 SYCNQ0VAF6 134 aa11.01□□□□□ -0.65
PKP3-203ENST00000525642 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.01□□□□□ -0.65
PKP3-203ENST00000525642 IGLV5-45A0A087WSX0 123 aa11□□□□□ -0.65
PKP3-203ENST00000525642 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
PKP3-203ENST00000525642 PMVKQ15126 192 aa11□□□□□ -0.65
PKP3-203ENST00000525642 PMCHL1Q16048 86 aa11□□□□□ -0.65
PKP3-203ENST00000525642 CIRBP-AS1Q8TBR5 109 aa11□□□□□ -0.65
PKP3-203ENST00000525642 CARD19Q96LW7 228 aa11□□□□□ -0.65
PKP3-203ENST00000525642 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
PKP3-203ENST00000525642 LINC00310P59036 64 aa10.99□□□□□ -0.65
PKP3-203ENST00000525642 SPAG11BQ08648 103 aa10.99□□□□□ -0.65
PKP3-203ENST00000525642 Q6ZRU5 148 aa10.99□□□□□ -0.65
PKP3-203ENST00000525642 ORAOV1Q8WV07 137 aa10.99□□□□□ -0.65
PKP3-203ENST00000525642 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
PKP3-203ENST00000525642 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
PKP3-203ENST00000525642 ATP5LO75964 103 aa10.97□□□□□ -0.65
PKP3-203ENST00000525642 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
PKP3-203ENST00000525642 CAMK2N2Q96S95 79 aa10.97□□□□□ -0.65
PKP3-203ENST00000525642 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.65
PKP3-203ENST00000525642 MRPL35Q9NZE8 188 aaKnown RBP10.96□□□□□ -0.65
PKP3-203ENST00000525642 ABCA13Q86UQ4 5058 aa10.96□□□□□ -0.66
PKP3-203ENST00000525642 IGLC3P0DOY3 106 aa10.95□□□□□ -0.66
PKP3-203ENST00000525642 BAGE3Q86Y29 109 aa10.95□□□□□ -0.66
PKP3-203ENST00000525642 GEMIN7Q9H840 131 aaKnown RBP10.95□□□□□ -0.66
PKP3-203ENST00000525642 PKIGQ9Y2B9 76 aa10.95□□□□□ -0.66
PKP3-203ENST00000525642 CHTF8P0CG12 524 aa10.94□□□□□ -0.66
PKP3-203ENST00000525642 A0A096LNI7 61 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 EPM2AB3EWF7 344 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 NDUFA1O15239 70 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 HSBP1O75506 76 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 SERF1AO75920 110 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 C10orf25Q5T742 122 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 Q8IZM0 81 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 PLAC8Q9NZF1 115 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 PCLOQ9Y6V0 5065 aa10.93□□□□□ -0.66
PKP3-203ENST00000525642 SMIM1B2RUZ4 78 aa10.92□□□□□ -0.66
PKP3-203ENST00000525642 NUPR1O60356 82 aa10.92□□□□□ -0.66
PKP3-203ENST00000525642 Q5VSD8 79 aa10.92□□□□□ -0.66
PKP3-203ENST00000525642 UNQ6190/PRO20217Q6UXQ8 127 aa10.92□□□□□ -0.66
PKP3-203ENST00000525642 FAM19A2Q8N3H0 131 aa10.92□□□□□ -0.66
PKP3-203ENST00000525642 A0A087WYN8 130 aa10.91□□□□□ -0.66
PKP3-203ENST00000525642 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
PKP3-203ENST00000525642 LOC107984640A0A0U1RRK4 108 aa10.91□□□□□ -0.66
PKP3-203ENST00000525642 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
PKP3-203ENST00000525642 S100A1P23297 94 aa10.91□□□□□ -0.66
PKP3-203ENST00000525642 LINC00469Q8N7U9 141 aa10.91□□□□□ -0.66
PKP3-203ENST00000525642 C6orf48Q9UBA6 75 aa10.91□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BKO60814 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BJP06899 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BOP23527 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BBP33778 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 PTTG1IPP53801 180 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BDP58876 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BCP62807 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST2H2BEQ16778 126 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms