RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 LECT2O14960 151 aa12.32□□□□□ -0.44
PTPRK-218ENST00000525459 APOMO95445 188 aa12.32□□□□□ -0.44
PTPRK-218ENST00000525459 MALP21145 153 aa12.32□□□□□ -0.44
PTPRK-218ENST00000525459 IGHV1-58A0A0C4DH39 117 aa12.31□□□□□ -0.44
PTPRK-218ENST00000525459 WFDC2Q14508 124 aa12.31□□□□□ -0.44
PTPRK-218ENST00000525459 PGPEP1Q9NXJ5 209 aa12.31□□□□□ -0.44
PTPRK-218ENST00000525459 NUPR1O60356 82 aa12.31□□□□□ -0.44
PTPRK-218ENST00000525459 ZC2HC1BQ5TFG8 222 aa12.31□□□□□ -0.44
PTPRK-218ENST00000525459 GEMIN7Q9H840 131 aaKnown RBP12.31□□□□□ -0.44
PTPRK-218ENST00000525459 DNAH10Q8IVF4 4471 aa12.3□□□□□ -0.44
PTPRK-218ENST00000525459 TINCRA0A1B0GVN0 87 aa12.3□□□□□ -0.44
PTPRK-218ENST00000525459 PRSS1P07477 247 aa12.3□□□□□ -0.44
PTPRK-218ENST00000525459 NDUFA6P56556 154 aa12.3□□□□□ -0.44
PTPRK-218ENST00000525459 LINC01561Q8N1V8 128 aa12.3□□□□□ -0.44
PTPRK-218ENST00000525459 TRAV12-1A0A0B4J245 112 aa12.29□□□□□ -0.44
PTPRK-218ENST00000525459 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
PTPRK-218ENST00000525459 C15orf56Q8N910 161 aa12.29□□□□□ -0.44
PTPRK-218ENST00000525459 A0A087WZ39 114 aa12.28□□□□□ -0.44
PTPRK-218ENST00000525459 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-218ENST00000525459 DNAH17Q9UFH2 4485 aa12.28□□□□□ -0.44
PTPRK-218ENST00000525459 hDV102S1A0JD36 115 aa12.27□□□□□ -0.45
PTPRK-218ENST00000525459 C5orf38Q86SI9 138 aa12.27□□□□□ -0.45
PTPRK-218ENST00000525459 OR10D4PQ8NGN7 298 aa12.27□□□□□ -0.45
PTPRK-218ENST00000525459 A0A0J9YXV3 536 aa12.26□□□□□ -0.45
PTPRK-218ENST00000525459 IGLC3P0DOY3 106 aa12.26□□□□□ -0.45
PTPRK-218ENST00000525459 FAT2Q9NYQ8 4349 aa12.26□□□□□ -0.45
PTPRK-218ENST00000525459 IGLV5-45A0A087WSX0 123 aa12.25□□□□□ -0.45
PTPRK-218ENST00000525459 S100A6P06703 90 aa12.25□□□□□ -0.45
PTPRK-218ENST00000525459 COX6A2Q02221 97 aa12.25□□□□□ -0.45
PTPRK-218ENST00000525459 IGLV5-52A0A0A0MRZ9 124 aa12.25□□□□□ -0.45
PTPRK-218ENST00000525459 FABP4P15090 132 aa12.25□□□□□ -0.45
PTPRK-218ENST00000525459 CHAC1Q9BUX1 264 aa12.25□□□□□ -0.45
PTPRK-218ENST00000525459 MAP1LC3CQ9BXW4 147 aa12.25□□□□□ -0.45
PTPRK-218ENST00000525459 CHTOPQ9Y3Y2 248 aaKnown RBP12.25□□□□□ -0.45
PTPRK-218ENST00000525459 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-218ENST00000525459 ZNF561-AS1K7EIQ3 104 aa12.24□□□□□ -0.45
PTPRK-218ENST00000525459 KRTAP10-2P60368 255 aa12.24□□□□□ -0.45
PTPRK-218ENST00000525459 LINC00469Q8N7U9 141 aa12.24□□□□□ -0.45
PTPRK-218ENST00000525459 IGHV3-64A0A075B6Q5 118 aa12.23□□□□□ -0.45
PTPRK-218ENST00000525459 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-218ENST00000525459 F8VRH5 84 aa12.23□□□□□ -0.45
PTPRK-218ENST00000525459 H3BRM9 83 aa12.23□□□□□ -0.45
PTPRK-218ENST00000525459 CNBPP62633 177 aaKnown RBP12.23□□□□□ -0.45
PTPRK-218ENST00000525459 CDKN2A-AS1Q9UH64 79 aa12.23□□□□□ -0.45
PTPRK-218ENST00000525459 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
PTPRK-218ENST00000525459 F8WDY8 70 aa12.22□□□□□ -0.45
PTPRK-218ENST00000525459 HIGD2BQ4VC39 106 aa12.22□□□□□ -0.45
PTPRK-218ENST00000525459 ORAOV1Q8WV07 137 aa12.22□□□□□ -0.45
PTPRK-218ENST00000525459 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
PTPRK-218ENST00000525459 SPAG11BQ08648 103 aa12.2□□□□□ -0.46
PTPRK-218ENST00000525459 C2orf48Q96LS8 159 aa12.2□□□□□ -0.46
PTPRK-218ENST00000525459 ODF1Q14990 250 aa12.2□□□□□ -0.46
PTPRK-218ENST00000525459 HECTD4Q9Y4D8 3996 aa12.19□□□□□ -0.46
PTPRK-218ENST00000525459 H0Y8G0 127 aa12.19□□□□□ -0.46
PTPRK-218ENST00000525459 MRPL35Q9NZE8 188 aaKnown RBP12.19□□□□□ -0.46
PTPRK-218ENST00000525459 PLNP26678 52 aa12.18□□□□□ -0.46
PTPRK-218ENST00000525459 S100A2P29034 98 aa12.18□□□□□ -0.46
PTPRK-218ENST00000525459 PKIGQ9Y2B9 76 aa12.18□□□□□ -0.46
PTPRK-218ENST00000525459 PKD1P98161 4303 aa12.18□□□□□ -0.46
PTPRK-218ENST00000525459 C11orf86A6NJI1 115 aa12.17□□□□□ -0.46
PTPRK-218ENST00000525459 ZNF22P17026 224 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-218ENST00000525459 GCSHP23434 173 aa12.17□□□□□ -0.46
PTPRK-218ENST00000525459 SMIM1B2RUZ4 78 aa12.17□□□□□ -0.46
PTPRK-218ENST00000525459 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
PTPRK-218ENST00000525459 PRSS2P07478 247 aa12.17□□□□□ -0.46
PTPRK-218ENST00000525459 Q8IZM0 81 aa12.17□□□□□ -0.46
PTPRK-218ENST00000525459 C9orf163Q8N9P6 203 aa12.17□□□□□ -0.46
PTPRK-218ENST00000525459 TMEM170BQ5T4T1 132 aa12.16□□□□□ -0.46
PTPRK-218ENST00000525459 HIST3H2BBQ8N257 126 aa12.16□□□□□ -0.46
PTPRK-218ENST00000525459 CAMK2N2Q96S95 79 aa12.16□□□□□ -0.46
PTPRK-218ENST00000525459 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
PTPRK-218ENST00000525459 PET117Q6UWS5 81 aa12.15□□□□□ -0.46
PTPRK-218ENST00000525459 CARD19Q96LW7 228 aa12.15□□□□□ -0.46
PTPRK-218ENST00000525459 NDUFA1O15239 70 aa12.14□□□□□ -0.47
PTPRK-218ENST00000525459 CXCL5P42830 114 aa12.14□□□□□ -0.47
PTPRK-218ENST00000525459 DPM2O94777 84 aa12.14□□□□□ -0.47
PTPRK-218ENST00000525459 SLPIP03973 132 aa12.13□□□□□ -0.47
PTPRK-218ENST00000525459 KIAA0087Q14695 138 aa12.13□□□□□ -0.47
PTPRK-218ENST00000525459 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
PTPRK-218ENST00000525459 AKR1D1P51857 326 aa12.12□□□□□ -0.47
PTPRK-218ENST00000525459 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
PTPRK-218ENST00000525459 TOMM7Q9P0U1 55 aa12.12□□□□□ -0.47
PTPRK-218ENST00000525459 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 C5orf52A6NGY3 159 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 IGKCP01834 107 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 C3orf79P0CE67 100 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.473e-6■■■■□ 20.3
PTPRK-218ENST00000525459 CKS1BP61024 79 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 SNRPEP62304 92 aaKnown RBP12.11□□□□□ -0.47
PTPRK-218ENST00000525459 C6orf226Q5I0X4 101 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 C20orf202A1L168 122 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 KRTDAPP60985 99 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 RNF151Q2KHN1 245 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 LINC01545Q5VT33 79 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 COX7B2Q8TF08 81 aa12.11□□□□□ -0.47
PTPRK-218ENST00000525459 SFTA2Q6UW10 78 aa12.1□□□□□ -0.47
PTPRK-218ENST00000525459 TRBV30A0A0K0K1B3 111 aa12.09□□□□□ -0.47
PTPRK-218ENST00000525459 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
PTPRK-218ENST00000525459 Q6ZRU5 148 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms