RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 UNQ6190/PRO20217Q6UXQ8 127 aa14.45□□□□□ -0.1
USP47-205ENST00000525257 FAM104AQ969W3 186 aa14.45□□□□□ -0.1
USP47-205ENST00000525257 GAGE2EQ4V326 116 aa14.44□□□□□ -0.1
USP47-205ENST00000525257 C6orf48Q9UBA6 75 aa14.44□□□□□ -0.1
USP47-205ENST00000525257 GAGE2DQ9UEU5 116 aa14.44□□□□□ -0.1
USP47-205ENST00000525257 MUC2Q02817 5179 aa14.43□□□□□ -0.1
USP47-205ENST00000525257 IGLV1-50A0A075B6I6 118 aa14.43□□□□□ -0.1
USP47-205ENST00000525257 TLX1NBP0CAT3 122 aa14.43□□□□□ -0.1
USP47-205ENST00000525257 C20orf78Q9BR46 151 aa14.43□□□□□ -0.1
USP47-205ENST00000525257 NAT8BQ9UHF3 227 aa14.43□□□□□ -0.1
USP47-205ENST00000525257 KRTAP1-4P0C5Y4 121 aa14.42□□□□□ -0.1
USP47-205ENST00000525257 IFITM10A6NMD0 228 aa14.41□□□□□ -0.1
USP47-205ENST00000525257 SRP19P09132 144 aaKnown RBP14.41□□□□□ -0.1
USP47-205ENST00000525257 CKS2P33552 79 aa14.41□□□□□ -0.1
USP47-205ENST00000525257 TMEM241Q24JQ0 296 aa14.41□□□□□ -0.1
USP47-205ENST00000525257 KRTAP7-1Q8IUC3 87 aa14.41□□□□□ -0.1
USP47-205ENST00000525257 SMDT1Q9H4I9 107 aa14.41□□□□□ -0.1
USP47-205ENST00000525257 SPANXA1Q9NS26 97 aa14.41□□□□□ -0.1
USP47-205ENST00000525257 RPL32P62910 135 aaKnown RBP14.4□□□□□ -0.1
USP47-205ENST00000525257 UBE2BP63146 152 aa14.4□□□□□ -0.1
USP47-205ENST00000525257 HBBP68871 147 aa14.4□□□□□ -0.1
USP47-205ENST00000525257 TRBV24-1A0A075B6N3 115 aa14.39□□□□□ -0.11
USP47-205ENST00000525257 LINC00862A6NCI5 91 aa14.39□□□□□ -0.11
USP47-205ENST00000525257 M0QXV9 152 aa14.39□□□□□ -0.11
USP47-205ENST00000525257 TCAPO15273 167 aa14.39□□□□□ -0.11
USP47-205ENST00000525257 TNFRSF6BO95407 300 aa14.39□□□□□ -0.11
USP47-205ENST00000525257 UBE2D1P51668 147 aa14.39□□□□□ -0.11
USP47-205ENST00000525257 PRR4Q16378 134 aa14.39□□□□□ -0.11
USP47-205ENST00000525257 SMIM2Q9BVW6 85 aa14.39□□□□□ -0.11
USP47-205ENST00000525257 MRPS36P82909 103 aaKnown RBP14.38□□□□□ -0.11
USP47-205ENST00000525257 FAM74A3Q4VXF1 159 aa14.38□□□□□ -0.11
USP47-205ENST00000525257 TGIF2-C20orf24A0A0A6YYL0 155 aa14.36□□□□□ -0.11
USP47-205ENST00000525257 RPL23P62829 140 aaKnown RBP14.35□□□□□ -0.11
USP47-205ENST00000525257 ADIRFQ15847 76 aa14.35□□□□□ -0.11
USP47-205ENST00000525257 SMIM27A0A1W2PRY6 76 aa14.34□□□□□ -0.11
USP47-205ENST00000525257 D6R8Y8 96 aa14.34□□□□□ -0.11
USP47-205ENST00000525257 KIAA0087Q14695 138 aa14.34□□□□□ -0.11
USP47-205ENST00000525257 NPYP01303 97 aa14.33□□□□□ -0.12
USP47-205ENST00000525257 RPL13AP40429 203 aaKnown RBP14.33□□□□□ -0.12
USP47-205ENST00000525257 C2orf82Q6UX34 121 aa14.33□□□□□ -0.12
USP47-205ENST00000525257 A0A1B0GW15 77 aa14.32□□□□□ -0.12
USP47-205ENST00000525257 AKAP14Q86UN6 197 aa14.32□□□□□ -0.12
USP47-205ENST00000525257 TRBV30A0A0K0K1B3 111 aa14.31□□□□□ -0.12
USP47-205ENST00000525257 C9orf129Q5T035 196 aaKnown RBP14.31□□□□□ -0.12
USP47-205ENST00000525257 NDUFC2-KCTD14E9PQ53 114 aa14.3□□□□□ -0.12
USP47-205ENST00000525257 MRPL54Q6P161 138 aaKnown RBP14.3□□□□□ -0.12
USP47-205ENST00000525257 IFI27P40305 119 aaPredicted RBP14.29□□□□□ -0.12
USP47-205ENST00000525257 LINC00242Q5T6M2 205 aa14.29□□□□□ -0.12
USP47-205ENST00000525257 PACRGQ96M98 296 aaPredicted RBP14.29□□□□□ -0.12
USP47-205ENST00000525257 NAT8Q9UHE5 227 aa14.28□□□□□ -0.12
USP47-205ENST00000525257 IGLV4-3A0A075B6K6 122 aa14.27□□□□□ -0.13
USP47-205ENST00000525257 F8W036 122 aa14.27□□□□□ -0.13
USP47-205ENST00000525257 CARHSP1Q9Y2V2 147 aaKnown RBP14.26□□□□□ -0.13
USP47-205ENST00000525257 S100A8P05109 93 aa14.25□□□□□ -0.13
USP47-205ENST00000525257 RAB5AP20339 215 aa14.25□□□□□ -0.13
USP47-205ENST00000525257 PYGO1Q9Y3Y4 419 aa14.25□□□□□ -0.13
USP47-205ENST00000525257 A0A1B0GXF2 115 aa14.24□□□□□ -0.13
USP47-205ENST00000525257 C9JQL5 133 aa14.24□□□□□ -0.13
USP47-205ENST00000525257 ZNF861PO60384 105 aa14.24□□□□□ -0.13
USP47-205ENST00000525257 PPBPP02775 128 aa14.24□□□□□ -0.13
USP47-205ENST00000525257 TMEM141Q96I45 108 aa14.24□□□□□ -0.13
USP47-205ENST00000525257 hCG_2014768A0A024R1R8 64 aa14.23□□□□□ -0.13
USP47-205ENST00000525257 TSPAN13O95857 204 aa14.23□□□□□ -0.13
USP47-205ENST00000525257 ORMDL3Q8N138 153 aa14.22□□□□□ -0.13
USP47-205ENST00000525257 LINC00469Q8N7U9 141 aa14.22□□□□□ -0.13
USP47-205ENST00000525257 A0A0U1RQV1 116 aa14.21□□□□□ -0.13
USP47-205ENST00000525257 TEX43Q6ZNM6 134 aa14.21□□□□□ -0.13
USP47-205ENST00000525257 ZC2HC1BQ5TFG8 222 aa14.2□□□□□ -0.14
USP47-205ENST00000525257 TMEM136Q6ZRR5 245 aa14.2□□□□□ -0.14
USP47-205ENST00000525257 PRELID3AQ96N28 172 aa14.2□□□□□ -0.14
USP47-205ENST00000525257 TOMM7Q9P0U1 55 aa14.2□□□□□ -0.14
USP47-205ENST00000525257 PRSS2P07478 247 aa14.19□□□□□ -0.14
USP47-205ENST00000525257 LINC01561Q8N1V8 128 aa14.19□□□□□ -0.14
USP47-205ENST00000525257 C2orf88Q9BSF0 95 aa14.19□□□□□ -0.14
USP47-205ENST00000525257 C22orf24Q9Y442 160 aa14.19□□□□□ -0.14
USP47-205ENST00000525257 NUPR1O60356 82 aa14.18□□□□□ -0.14
USP47-205ENST00000525257 SRSF3P84103 164 aaKnown RBP14.18□□□□□ -0.14
USP47-205ENST00000525257 CKS1BP61024 79 aa14.17□□□□□ -0.14
USP47-205ENST00000525257 CTDSP1Q9GZU7 261 aa14.17□□□□□ -0.14
USP47-205ENST00000525257 XAGE1AQ9HD64 81 aa14.17□□□□□ -0.14
USP47-205ENST00000525257 LOC389332A0A1B0GUA5 103 aa14.16□□□□□ -0.14
USP47-205ENST00000525257 Q6ZN92 141 aa14.16□□□□□ -0.14
USP47-205ENST00000525257 LBHQ53QV2 105 aaPredicted RBP14.15□□□□□ -0.14
USP47-205ENST00000525257 LINC00173Q6ZV60 143 aa14.15□□□□□ -0.14
USP47-205ENST00000525257 KRTAP9-2Q9BYQ4 174 aa14.15□□□□□ -0.14
USP47-205ENST00000525257 A0A087X002 238 aa14.14□□□□□ -0.15
USP47-205ENST00000525257 C6orf226Q5I0X4 101 aa14.14□□□□□ -0.15
USP47-205ENST00000525257 PEA15Q15121 130 aa14.13□□□□□ -0.15
USP47-205ENST00000525257 CYSLTR1Q9Y271 337 aa14.13□□□□□ -0.15
USP47-205ENST00000525257 C2orf66Q6UXQ4 117 aa14.12□□□□□ -0.15
USP47-205ENST00000525257 ATP5L2Q7Z4Y8 100 aa14.12□□□□□ -0.15
USP47-205ENST00000525257 Q8IZM0 81 aa14.12□□□□□ -0.15
USP47-205ENST00000525257 AMELXQ99217 191 aa14.12□□□□□ -0.15
USP47-205ENST00000525257 ALKBH7Q9BT30 221 aaPredicted RBP14.12□□□□□ -0.15
USP47-205ENST00000525257 VCX2Q9H322 139 aa14.12□□□□□ -0.15
USP47-205ENST00000525257 MAP1LC3AQ9H492 121 aa14.12□□□□□ -0.15
USP47-205ENST00000525257 PRSS47A8MTI9 375 aa14.1□□□□□ -0.15
USP47-205ENST00000525257 RPL28P46779 137 aaKnown RBP14.1□□□□□ -0.15
USP47-205ENST00000525257 MRPL55Q7Z7F7 128 aaKnown RBP14.1□□□□□ -0.15
USP47-205ENST00000525257 TYMSOSQ8TAI1 123 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms