RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 MOBPQ13875 183 aa3.39□□□□□ -1.87
NEDD8-203ENST00000524927 KRTAP13-1Q8IUC0 172 aa3.39□□□□□ -1.87
NEDD8-203ENST00000524927 RTBDNQ9BSG5 229 aaPredicted RBP3.39□□□□□ -1.87
NEDD8-203ENST00000524927 NMES1Q9C002 83 aa3.39□□□□□ -1.87
NEDD8-203ENST00000524927 UQCC1Q9NVA1 299 aa3.39□□□□□ -1.87
NEDD8-203ENST00000524927 MRPL35Q9NZE8 188 aaKnown RBP3.39□□□□□ -1.87
NEDD8-203ENST00000524927 C14orf166Q9Y224 244 aaKnown RBP3.39□□□□□ -1.87
NEDD8-203ENST00000524927 PIGBOS1A0A0B4J2F0 54 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 CCL25O15444 150 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 UPK1BO75841 260 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 GCGP01275 180 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 SLC25A6P12236 298 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 COTL1Q14019 142 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 ZNF56Q15929 161 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 RNASE10Q5GAN6 216 aaKnown RBP3.38□□□□□ -1.87
NEDD8-203ENST00000524927 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 CBY1Q9Y3M2 126 aa3.38□□□□□ -1.87
NEDD8-203ENST00000524927 HSBP1L1C9JCN9 74 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 H3BVH4 76 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 RANP62826 216 aaKnown RBP3.37□□□□□ -1.87
NEDD8-203ENST00000524927 IAH1Q2TAA2 248 aaPredicted RBP3.37□□□□□ -1.87
NEDD8-203ENST00000524927 C6orf99Q4VX62 202 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 DNLZQ5SXM8 178 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 PRNTQ86SH4 94 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 SLC7A5P1Q8MH63 180 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 OR5C1Q8NGR4 320 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 FXYD5Q96DB9 178 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 SMDT1Q9H4I9 107 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 C11orf1Q9H5F2 150 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 NDUFB11Q9NX14 153 aa3.37□□□□□ -1.87
NEDD8-203ENST00000524927 ARMS2P0C7Q2 107 aa3.36□□□□□ -1.87
NEDD8-203ENST00000524927 RPL37P61927 97 aaKnown RBP3.36□□□□□ -1.87
NEDD8-203ENST00000524927 ATP6V1FQ16864 119 aa3.36□□□□□ -1.87
NEDD8-203ENST00000524927 MIC13Q5XKP0 118 aa3.36□□□□□ -1.87
NEDD8-203ENST00000524927 ENKURQ8TC29 256 aa3.36□□□□□ -1.87
NEDD8-203ENST00000524927 FAM167A-AS1Q96KT0 104 aa3.36□□□□□ -1.87
NEDD8-203ENST00000524927 GGACTQ9BVM4 153 aa3.36□□□□□ -1.87
NEDD8-203ENST00000524927 LINC00959A0A1B0GUT2 108 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 M0R381 172 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 PSPHP1O15172 72 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 FGF7P21781 194 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 SCGB2B2Q4G0G5 96 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 TMEM14EPQ6UXP3 125 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 GOLT1AQ6ZVE7 132 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 ZFP82Q8N141 532 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 SLC25A21Q9BQT8 299 aaPredicted RBP3.35□□□□□ -1.87
NEDD8-203ENST00000524927 TP73-AS1Q9UF72 201 aa3.35□□□□□ -1.87
NEDD8-203ENST00000524927 G3V3Q6 166 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 M0R036 132 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 SCO1O75880 301 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 TMEM241Q24JQ0 296 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 SLC25A34Q6PIV7 304 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 LYZL1Q6UWQ5 148 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 CLVS1Q8IUQ0 354 aaPredicted RBP3.34□□□□□ -1.87
NEDD8-203ENST00000524927 C8orf59Q8N0T1 100 aaPredicted RBP3.34□□□□□ -1.87
NEDD8-203ENST00000524927 CMTM2Q8TAZ6 248 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 PYDC1Q8WXC3 89 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 PSENENQ9NZ42 101 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 RSL24D1Q9UHA3 163 aaKnown RBP3.34□□□□□ -1.87
NEDD8-203ENST00000524927 C22orf24Q9Y442 160 aa3.34□□□□□ -1.87
NEDD8-203ENST00000524927 COX7A2LO14548 114 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 CD3DP04234 171 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 METTL15P1P0C7V9 234 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 TPT1P13693 172 aaKnown RBP3.33□□□□□ -1.88
NEDD8-203ENST00000524927 UBE2NLQ5JXB2 153 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 AMMECR1LQ6DCA0 310 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 STX12Q86Y82 276 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 HYLS1Q96M11 299 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 MARVELD1Q9BSK0 173 aa3.33□□□□□ -1.88
NEDD8-203ENST00000524927 TXNL4BQ9NX01 149 aaKnown RBP3.33□□□□□ -1.88
NEDD8-203ENST00000524927 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 TCRAP04437 139 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 RPL12P30050 165 aaKnown RBP3.32□□□□□ -1.88
NEDD8-203ENST00000524927 SPAG11BQ08648 103 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 FAM74A1Q5RGS3 127 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 DEDD2Q8WXF8 326 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 SMIM8Q96KF7 97 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 PACRGQ96M98 296 aaPredicted RBP3.32□□□□□ -1.88
NEDD8-203ENST00000524927 C20orf166-AS1Q96NR2 134 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 OTORQ9NRC9 128 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 SCN3BQ9NY72 215 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
NEDD8-203ENST00000524927 B4DEV8 164 aa3.31□□□□□ -1.88
NEDD8-203ENST00000524927 NDUFA1O15239 70 aa3.31□□□□□ -1.88
NEDD8-203ENST00000524927 NTF3P20783 257 aa3.31□□□□□ -1.88
NEDD8-203ENST00000524927 SDC2P34741 201 aa3.31□□□□□ -1.88
NEDD8-203ENST00000524927 VBP1P61758 197 aa3.31□□□□□ -1.88
NEDD8-203ENST00000524927 MIR17HGQ75NE6 70 aa3.31□□□□□ -1.88
NEDD8-203ENST00000524927 PLEKHB2Q96CS7 222 aa3.31□□□□□ -1.88
NEDD8-203ENST00000524927 C6orf48Q9UBA6 75 aa3.31□□□□□ -1.88
NEDD8-203ENST00000524927 FABP5P3A8MUU1 101 aa3.3□□□□□ -1.88
NEDD8-203ENST00000524927 ATP5HO75947 161 aa3.3□□□□□ -1.88
NEDD8-203ENST00000524927 IGLV6-57P01721 117 aa3.3□□□□□ -1.88
NEDD8-203ENST00000524927 APOA1P02647 267 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms