RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 MT1HL1P0DM35 61 aa3.92□□□□□ -1.78
LINC00534-204ENST00000524361 GNG4P50150 75 aa3.92□□□□□ -1.78
LINC00534-204ENST00000524361 SULT1A2P50226 295 aa3.92□□□□□ -1.78
LINC00534-204ENST00000524361 FOXA3P55318 350 aaPredicted RBP3.92□□□□□ -1.78
LINC00534-204ENST00000524361 S100A12P80511 92 aa3.92□□□□□ -1.78
LINC00534-204ENST00000524361 HIGD2BQ4VC39 106 aa3.92□□□□□ -1.78
LINC00534-204ENST00000524361 NIT2Q9NQR4 276 aa3.92□□□□□ -1.78
LINC00534-204ENST00000524361 TRBV20OR9-2A0A075B6H5 130 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 TRAV8-4A0A0B4J246 113 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 IGKV2-24A0A0C4DH68 120 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 A0A1B0GUV1 79 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 F2Z2F3 143 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 H7C1H1 209 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 UBE2L6O14933 153 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 P01737 135 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 RPS20P60866 119 aaKnown RBP3.91□□□□□ -1.78
LINC00534-204ENST00000524361 CACNG7P62955 275 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 COX6A2Q02221 97 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 NRACQ8N912 160 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 GATD1Q8NB37 220 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 CHCHD10Q8WYQ3 142 aaPredicted RBP3.91□□□□□ -1.78
LINC00534-204ENST00000524361 LINC00526Q96FQ7 95 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 RNASE7Q9H1E1 156 aaKnown RBP3.91□□□□□ -1.78
LINC00534-204ENST00000524361 MANBALQ9NQG1 85 aa3.91□□□□□ -1.78
LINC00534-204ENST00000524361 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.79
LINC00534-204ENST00000524361 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.9□□□□□ -1.79
LINC00534-204ENST00000524361 TRAV1-1A0A0B4J248 108 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 FAM240AA0A1B0GVK7 77 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 IGKV2-29A2NJV5 120 aaPredicted RBP3.9□□□□□ -1.79
LINC00534-204ENST00000524361 PHOX2AO14813 284 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 PFN2P35080 140 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 CNBPP62633 177 aaKnown RBP3.9□□□□□ -1.79
LINC00534-204ENST00000524361 EIF5AP63241 154 aaKnown RBP3.9□□□□□ -1.79
LINC00534-204ENST00000524361 Q6ZRP5 223 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 SMIM15Q7Z3B0 74 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 FAM19A5Q7Z5A7 132 aaPredicted RBP3.9□□□□□ -1.79
LINC00534-204ENST00000524361 C15orf56Q8N910 161 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 SPACA4Q8TDM5 124 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 RPL39LQ96EH5 51 aaKnown RBP3.9□□□□□ -1.79
LINC00534-204ENST00000524361 DPH3P1Q9H4G8 78 aa3.9□□□□□ -1.79
LINC00534-204ENST00000524361 TINCRA0A1B0GVN0 87 aa3.89□□□□□ -1.79
LINC00534-204ENST00000524361 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
LINC00534-204ENST00000524361 TRGC1P0CF51 173 aa3.89□□□□□ -1.79
LINC00534-204ENST00000524361 RPS10P46783 165 aaKnown RBP3.89□□□□□ -1.79
LINC00534-204ENST00000524361 NDUFV3P56181 108 aaKnown RBP3.89□□□□□ -1.79
LINC00534-204ENST00000524361 MEF2BQ02080 365 aaPredicted RBP3.89□□□□□ -1.79
LINC00534-204ENST00000524361 CIRBPQ14011 172 aaKnown RBP3.89□□□□□ -1.79
LINC00534-204ENST00000524361 AMMECR1LQ6DCA0 310 aa3.89□□□□□ -1.79
LINC00534-204ENST00000524361 Q6ZRU5 148 aa3.89□□□□□ -1.79
LINC00534-204ENST00000524361 MRPL55Q7Z7F7 128 aaKnown RBP3.89□□□□□ -1.79
LINC00534-204ENST00000524361 MRAP2Q96G30 205 aa3.89□□□□□ -1.79
LINC00534-204ENST00000524361 PDE6DO43924 150 aa3.88□□□□□ -1.79
LINC00534-204ENST00000524361 BCL2P10415 239 aa3.88□□□□□ -1.79
LINC00534-204ENST00000524361 XCL1P47992 114 aa3.88□□□□□ -1.79
LINC00534-204ENST00000524361 C10orf91Q5T1B1 145 aa3.88□□□□□ -1.79
LINC00534-204ENST00000524361 ALKAL2Q6UX46 152 aa3.88□□□□□ -1.79
LINC00534-204ENST00000524361 C7orf33Q8WU49 177 aa3.88□□□□□ -1.79
LINC00534-204ENST00000524361 OCR1Q9BZK8 76 aa3.88□□□□□ -1.79
LINC00534-204ENST00000524361 RPP21Q9H633 154 aaKnown RBP3.88□□□□□ -1.79
LINC00534-204ENST00000524361 PLAC8Q9NZF1 115 aa3.88□□□□□ -1.79
LINC00534-204ENST00000524361 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
LINC00534-204ENST00000524361 A0A096LNI7 61 aa3.87□□□□□ -1.79
LINC00534-204ENST00000524361 SDHAF1A6NFY7 115 aa3.87□□□□□ -1.79
LINC00534-204ENST00000524361 SCO1O75880 301 aa3.87□□□□□ -1.79
LINC00534-204ENST00000524361 FGF6P10767 208 aa3.87□□□□□ -1.79
LINC00534-204ENST00000524361 CTRLP40313 264 aa3.87□□□□□ -1.79
LINC00534-204ENST00000524361 EIF5AL1Q6IS14 154 aaKnown RBP3.87□□□□□ -1.79
LINC00534-204ENST00000524361 RNF185Q96GF1 192 aa3.87□□□□□ -1.79
LINC00534-204ENST00000524361 BIN3Q9NQY0 253 aa3.87□□□□□ -1.79
LINC00534-204ENST00000524361 CARHSP1Q9Y2V2 147 aaKnown RBP3.87□□□□□ -1.79
LINC00534-204ENST00000524361 TMEM218A2RU14 115 aa3.86□□□□□ -1.79
LINC00534-204ENST00000524361 CCL25O15444 150 aa3.86□□□□□ -1.79
LINC00534-204ENST00000524361 APCSP02743 223 aa3.86□□□□□ -1.79
LINC00534-204ENST00000524361 SVBPQ8N300 66 aa3.86□□□□□ -1.79
LINC00534-204ENST00000524361 SMIM12Q96EX1 92 aa3.86□□□□□ -1.79
LINC00534-204ENST00000524361 GVQW2A0A096LPI5 108 aaPredicted RBP3.85□□□□□ -1.79
LINC00534-204ENST00000524361 LINC00959A0A1B0GUT2 108 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 I3L3M4 83 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 NCR2O95944 276 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 PRR3P79522 188 aaKnown RBP3.85□□□□□ -1.79
LINC00534-204ENST00000524361 RNASE13Q5GAN3 156 aaKnown RBP3.85□□□□□ -1.79
LINC00534-204ENST00000524361 Q6ZVH6 145 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 NOTCH2NLQ7Z3S9 236 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 OR5A1Q8NGJ0 315 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 TMEM101Q96IK0 257 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 BTF3L4Q96K17 158 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 LINC01600Q96MT4 127 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 CNFNQ9BYD5 112 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 MAP1LC3AQ9H492 121 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 TMEM242Q9NWH2 141 aa3.85□□□□□ -1.79
LINC00534-204ENST00000524361 IGLV4-3A0A075B6K6 122 aa3.84□□□□□ -1.79
LINC00534-204ENST00000524361 IGHV3OR16-9A0A0B4J2B5 98 aa3.84□□□□□ -1.79
LINC00534-204ENST00000524361 A0A1W2PNN7 141 aa3.84□□□□□ -1.79
LINC00534-204ENST00000524361 A8MWL6 223 aa3.84□□□□□ -1.79
LINC00534-204ENST00000524361 TCAPO15273 167 aa3.84□□□□□ -1.79
LINC00534-204ENST00000524361 APOC3P02656 99 aa3.84□□□□□ -1.79
LINC00534-204ENST00000524361 ESDP10768 282 aa3.84□□□□□ -1.79
LINC00534-204ENST00000524361 SS18Q15532 418 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms