RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 CCL26Q9Y258 94 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 CACNA1DQ01668 2161 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 FLNBO75369 2602 aaKnown RBP2.5□□□□□ -2.01
SKP1-211ENST00000523359 TRIOBPQ9H2D6 2365 aa2.5□□□□□ -2.01
SKP1-211ENST00000523359 AFDNP55196 1824 aaKnown RBP2.49□□□□□ -2.01
SKP1-211ENST00000523359 DUOX1Q9NRD9 1551 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 TRBV7-3A0A075B6L6 115 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 TRAV23DV6A0A075B6W5 121 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 A0A0J9YY99 117 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 TMEM30CPA0ZSE6 113 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 S100A3P33764 101 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 Q8N6K4 173 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 LINC00304Q8N9R0 145 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 PATE1Q8WXA2 126 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 IFI27L1Q96BM0 104 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 PRO1854Q9UHT4 67 aa2.49□□□□□ -2.01
SKP1-211ENST00000523359 DLG5Q8TDM6 1919 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 SZT2Q5T011 3432 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 PDCD11Q14690 1871 aaKnown RBP2.48□□□□□ -2.01
SKP1-211ENST00000523359 GBF1Q92538 1859 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 J3QRE1 110 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 ACYP1P07311 99 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 PRB4P10163 310 aaPredicted RBP2.48□□□□□ -2.01
SKP1-211ENST00000523359 SERF2P84101 59 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 TPRXLQ17RH7 258 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 CSAG1Q6PB30 78 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 LINC00643Q86TS7 51 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 CLECL1Q8IZS7 167 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 ZNF563Q8TA94 476 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 DMAC1Q96GE9 116 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 CDC42SE2Q9NRR3 84 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 LRRC37A3O60309 1634 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 COL6A3P12111 3177 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 BDP1A6H8Y1 2624 aa2.48□□□□□ -2.01
SKP1-211ENST00000523359 PIEZO1Q92508 2521 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 RP1P56715 2156 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 ANKRD11Q6UB99 2663 aaPredicted RBP2.47□□□□□ -2.01
SKP1-211ENST00000523359 CLPSL1A2RUU4 121 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 NUPR2A6NF83 97 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 CTSGP08311 255 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 NCBP2-AS2Q69YL0 99 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 FAM223AQ8IWN6 122 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 LIMD2Q9BT23 127 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 TJP1Q07157 1748 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 DOT1LQ8TEK3 1739 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 NRXN2Q9P2S2 1712 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 SCN7AQ01118 1682 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 SIP14410 1827 aa2.47□□□□□ -2.01
SKP1-211ENST00000523359 FASNP49327 2511 aaKnown RBP2.46□□□□□ -2.01
SKP1-211ENST00000523359 DOCK11Q5JSL3 2073 aa2.46□□□□□ -2.01
SKP1-211ENST00000523359 NRXN3Q9Y4C0 1643 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 MED12Q93074 2177 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 BAZ2BQ9UIF8 2168 aaKnown RBP2.46□□□□□ -2.02
SKP1-211ENST00000523359 IGKV3-7A0A075B6H7 116 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 TRBV25-1A0A075B6N4 114 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 TEX49A0A1B0GTD5 131 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 LOC101927531A0A1B0GV80 90 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 SDHAF1A6NFY7 115 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 TMEM170BQ5T4T1 132 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 C4orf3Q8WVX3 66 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 FAM103A1Q9BTL3 118 aaKnown RBP2.46□□□□□ -2.02
SKP1-211ENST00000523359 HEATR1Q9H583 2144 aaKnown RBP2.46□□□□□ -2.02
SKP1-211ENST00000523359 GNG13Q9P2W3 67 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 ARL2-SNX15V9GYD0 113 aa2.46□□□□□ -2.02
SKP1-211ENST00000523359 NRAPQ86VF7 1730 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 IGHV3-30P01768 117 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 TFF1P04155 84 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 COX6CP09669 75 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 IGHV3-30-5P0DP03 117 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 DEFB121Q5J5C9 76 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 SPACA4Q8TDM5 124 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 COL14A1Q05707 1796 aaKnown RBP2.45□□□□□ -2.02
SKP1-211ENST00000523359 DLEC1Q9Y238 1755 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 TEP1Q99973 2627 aaKnown RBP2.45□□□□□ -2.02
SKP1-211ENST00000523359 A0A0G2JMZ2 1700 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 LRRC37A2A6NM11 1700 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 LRRC37AA6NMS7 1700 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 COL4A2P08572 1712 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 BRWD1Q9NSI6 2320 aa2.45□□□□□ -2.02
SKP1-211ENST00000523359 CEBPZOSA8MTT3 80 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 TMEM14DPA8MWL7 114 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 HCRTO43612 131 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 LEPROTL1O95214 131 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 IGKV4-1P06312 121 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 C6orf201Q7Z4U5 140 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 ORMDL1Q9P0S3 153 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 CHD6Q8TD26 2715 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 CEP192Q8TEP8 1941 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 SIPA1L3O60292 1781 aaPredicted RBP2.44□□□□□ -2.02
SKP1-211ENST00000523359 BCORQ6W2J9 1755 aa2.44□□□□□ -2.02
SKP1-211ENST00000523359 ARFGEF3Q5TH69 2177 aa2.43□□□□□ -2.02
SKP1-211ENST00000523359 C10orf142B7Z368 130 aa2.43□□□□□ -2.02
SKP1-211ENST00000523359 RPL38P63173 70 aaKnown RBP2.43□□□□□ -2.02
SKP1-211ENST00000523359 C10orf128Q5T292 105 aa2.43□□□□□ -2.02
SKP1-211ENST00000523359 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
SKP1-211ENST00000523359 NDUFA4L2Q9NRX3 87 aa2.43□□□□□ -2.02
SKP1-211ENST00000523359 ANKRD17O75179 2603 aaKnown RBP2.43□□□□□ -2.02
SKP1-211ENST00000523359 TSC2P49815 1807 aa2.42□□□□□ -2.02
SKP1-211ENST00000523359 CTXND1A0A1B0GTU2 59 aa2.42□□□□□ -2.02
SKP1-211ENST00000523359 EDDM3BP56851 147 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms