RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 LINC00469Q8N7U9 141 aa4.79□□□□□ -1.64
CSMD1-211ENST00000523062 CHCHD5Q9BSY4 110 aa4.79□□□□□ -1.64
CSMD1-211ENST00000523062 C11orf68Q9H3H3 251 aaKnown RBP4.79□□□□□ -1.64
CSMD1-211ENST00000523062 IGLV5-45A0A087WSX0 123 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 TRAV26-1A0A087WT03 109 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 GCSHP23434 173 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 TSPEAR-AS2P59090 65 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 HERVK_113P63121 156 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 GAGE6Q13070 117 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 SH2D6Q7Z4S9 175 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 RETNQ9HD89 108 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 CDC42SE2Q9NRR3 84 aa4.78□□□□□ -1.64
CSMD1-211ENST00000523062 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
CSMD1-211ENST00000523062 F5H768 121 aa4.77□□□□□ -1.65
CSMD1-211ENST00000523062 VSIG2Q96IQ7 327 aa4.77□□□□□ -1.65
CSMD1-211ENST00000523062 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
CSMD1-211ENST00000523062 TM2D2Q9BX73 214 aa4.77□□□□□ -1.65
CSMD1-211ENST00000523062 IGHV3-64A0A075B6Q5 118 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 TRAV13-1A0A0B4J241 112 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 A0A0J9YY99 117 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 IGHV3-30-3P0DP02 117 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 HTN3P15516 51 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 MRPL23Q16540 153 aaKnown RBP4.76□□□□□ -1.65
CSMD1-211ENST00000523062 LINC00242Q5T6M2 205 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 CEND1Q8N111 149 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 SPANXB1Q9NS25 103 aaPredicted RBP4.76□□□□□ -1.65
CSMD1-211ENST00000523062 COX11Q9Y6N1 276 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 ICOSQ9Y6W8 199 aa4.76□□□□□ -1.65
CSMD1-211ENST00000523062 FBN1P35555 2871 aaKnown RBP4.75□□□□□ -1.65
CSMD1-211ENST00000523062 STAB1Q9NY15 2570 aa4.75□□□□□ -1.65
CSMD1-211ENST00000523062 TRAV8-3A0A0A6YYJ7 113 aa4.75□□□□□ -1.65
CSMD1-211ENST00000523062 TAX1BP3O14907 124 aa4.75□□□□□ -1.65
CSMD1-211ENST00000523062 SPINK8P0C7L1 97 aa4.75□□□□□ -1.65
CSMD1-211ENST00000523062 PTTG1IPP53801 180 aa4.75□□□□□ -1.65
CSMD1-211ENST00000523062 FXYD2P54710 66 aa4.75□□□□□ -1.65
CSMD1-211ENST00000523062 C12orf74Q32Q52 190 aa4.75□□□□□ -1.65
CSMD1-211ENST00000523062 CDKN2A-AS1Q9UH64 79 aa4.75□□□□□ -1.65
CSMD1-211ENST00000523062 DNHD1Q96M86 4753 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 TRRAPQ9Y4A5 3859 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 IGLV4-60A0A075B6I1 120 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 A0A096LPF7 62 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 A0A1B0GUV1 79 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 TMEM238C9JI98 176 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 H3BNG1 76 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 RBX1P62877 108 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 COX6A2Q02221 97 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
CSMD1-211ENST00000523062 ZFAND6Q6FIF0 208 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 NDUFA12Q9UI09 145 aa4.74□□□□□ -1.65
CSMD1-211ENST00000523062 A0A0J9YXY3 114 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 SMIM1B2RUZ4 78 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 K7EIL1 84 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 K7EP13 123 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 NDUFA1O15239 70 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 SMIM13P0DJ93 91 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 KPRPQ5T749 579 aaPredicted RBP4.73□□□□□ -1.65
CSMD1-211ENST00000523062 LELP1Q5T871 98 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 C10orf126Q8N4M7 172 aa4.73□□□□□ -1.65
CSMD1-211ENST00000523062 NHP2Q9NX24 153 aaKnown RBP4.73□□□□□ -1.65
CSMD1-211ENST00000523062 IGKV3OR2-268A0A0C4DH90 116 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 A0A0J9YWU9 116 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 A0A1B0GWB2 263 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 CCL25O15444 150 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 TIMM17BO60830 172 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 SS18Q15532 418 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 VAMP3Q15836 100 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 Q6ZTC4 211 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 Q6ZVH6 145 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 COL6A5A8TX70 2615 aa4.72□□□□□ -1.65
CSMD1-211ENST00000523062 LINC00959A0A1B0GUT2 108 aa4.71□□□□□ -1.66
CSMD1-211ENST00000523062 K7ERJ3 54 aa4.71□□□□□ -1.66
CSMD1-211ENST00000523062 IGHV3-30P01768 117 aa4.71□□□□□ -1.66
CSMD1-211ENST00000523062 IGHV3-30-5P0DP03 117 aa4.71□□□□□ -1.66
CSMD1-211ENST00000523062 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
CSMD1-211ENST00000523062 C11orf45Q8TAV5 145 aa4.71□□□□□ -1.66
CSMD1-211ENST00000523062 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
CSMD1-211ENST00000523062 TM2D3Q9BRN9 247 aa4.71□□□□□ -1.66
CSMD1-211ENST00000523062 DNAH3Q8TD57 4116 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 NBEAL2Q6ZNJ1 2754 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 A0A087WZ39 114 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 IGHV3OR16-9A0A0B4J2B5 98 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 H3BUT2 72 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 PRB2P02812 416 aaPredicted RBP4.7□□□□□ -1.66
CSMD1-211ENST00000523062 ANGP03950 147 aaKnown RBP4.7□□□□□ -1.66
CSMD1-211ENST00000523062 NANOS2P60321 138 aaKnown RBP4.7□□□□□ -1.66
CSMD1-211ENST00000523062 HERV-K104P63124 156 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
CSMD1-211ENST00000523062 MIAQ16674 131 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 DEFB121Q5J5C9 76 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 LINC01561Q8N1V8 128 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 COX7B2Q8TF08 81 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 LITAFQ99732 161 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 SPANXDQ9BXN6 97 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 Q9H8V8 135 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 SPANXCQ9NY87 97 aa4.7□□□□□ -1.66
CSMD1-211ENST00000523062 CMYA5Q8N3K9 4069 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms