RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 NAA38Q9BRA0 125 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-210ENST00000521667 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
TRAPPC9-210ENST00000521667 RETNQ9HD89 108 aa12.84□□□□□ -0.35
TRAPPC9-210ENST00000521667 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
TRAPPC9-210ENST00000521667 TMEM238C9JI98 176 aa12.83□□□□□ -0.36
TRAPPC9-210ENST00000521667 SMIM1B2RUZ4 78 aa12.83□□□□□ -0.36
TRAPPC9-210ENST00000521667 HTN3P15516 51 aa12.83□□□□□ -0.36
TRAPPC9-210ENST00000521667 A0A1W2PPM0 123 aa12.81□□□□□ -0.36
TRAPPC9-210ENST00000521667 TMEM262E9PQX1 116 aa12.81□□□□□ -0.36
TRAPPC9-210ENST00000521667 SAMD5Q5TGI4 173 aa12.81□□□□□ -0.36
TRAPPC9-210ENST00000521667 CBY1Q9Y3M2 126 aa12.81□□□□□ -0.36
TRAPPC9-210ENST00000521667 IGKV3OR2-268A0A0C4DH90 116 aa12.81□□□□□ -0.36
TRAPPC9-210ENST00000521667 A0A1B0GUV1 79 aa12.81□□□□□ -0.36
TRAPPC9-210ENST00000521667 RBX1P62877 108 aa12.8□□□□□ -0.36
TRAPPC9-210ENST00000521667 IGLL5B9A064 214 aa12.79□□□□□ -0.36
TRAPPC9-210ENST00000521667 NDUFA1O15239 70 aa12.79□□□□□ -0.36
TRAPPC9-210ENST00000521667 MRPL23Q16540 153 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-210ENST00000521667 LITAFQ99732 161 aa12.79□□□□□ -0.36
TRAPPC9-210ENST00000521667 NOTCH1P46531 2555 aa12.78□□□□□ -0.36
TRAPPC9-210ENST00000521667 GAGE10A6NGK3 116 aa12.78□□□□□ -0.36
TRAPPC9-210ENST00000521667 FABP2P12104 132 aa12.78□□□□□ -0.36
TRAPPC9-210ENST00000521667 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
TRAPPC9-210ENST00000521667 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-210ENST00000521667 SH2D6Q7Z4S9 175 aa12.78□□□□□ -0.36
TRAPPC9-210ENST00000521667 C11orf68Q9H3H3 251 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-210ENST00000521667 GTF2H5Q6ZYL4 71 aa12.77□□□□□ -0.37
TRAPPC9-210ENST00000521667 LINC00959A0A1B0GUT2 108 aa12.76□□□□□ -0.37
TRAPPC9-210ENST00000521667 K7EP34 96 aa12.76□□□□□ -0.37
TRAPPC9-210ENST00000521667 MUSTN1Q8IVN3 82 aa12.76□□□□□ -0.37
TRAPPC9-210ENST00000521667 RPL24P83731 157 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-210ENST00000521667 SPANXDQ9BXN6 97 aa12.76□□□□□ -0.37
TRAPPC9-210ENST00000521667 SPANXCQ9NY87 97 aa12.76□□□□□ -0.37
TRAPPC9-210ENST00000521667 NBEAL1Q6ZS30 2694 aa12.75□□□□□ -0.37
TRAPPC9-210ENST00000521667 TIMM17BO60830 172 aa12.75□□□□□ -0.37
TRAPPC9-210ENST00000521667 APOMO95445 188 aa12.75□□□□□ -0.37
TRAPPC9-210ENST00000521667 Q9H8V8 135 aa12.75□□□□□ -0.37
TRAPPC9-210ENST00000521667 SPCS1Q9Y6A9 102 aa12.75□□□□□ -0.37
TRAPPC9-210ENST00000521667 IGHV3OR16-9A0A0B4J2B5 98 aa12.74□□□□□ -0.37
TRAPPC9-210ENST00000521667 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
TRAPPC9-210ENST00000521667 A4D1N5 150 aa12.74□□□□□ -0.37
TRAPPC9-210ENST00000521667 CFC1BP0CG36 223 aa12.74□□□□□ -0.37
TRAPPC9-210ENST00000521667 CFC1P0CG37 223 aa12.74□□□□□ -0.37
TRAPPC9-210ENST00000521667 MIAQ16674 131 aa12.73□□□□□ -0.37
TRAPPC9-210ENST00000521667 PGPEP1Q9NXJ5 209 aa12.73□□□□□ -0.37
TRAPPC9-210ENST00000521667 PRSS2P07478 247 aa12.72□□□□□ -0.37
TRAPPC9-210ENST00000521667 SS18Q15532 418 aa12.72□□□□□ -0.37
TRAPPC9-210ENST00000521667 LELP1Q5T871 98 aa12.72□□□□□ -0.37
TRAPPC9-210ENST00000521667 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC9-210ENST00000521667 A0A087WZ39 114 aa12.71□□□□□ -0.37
TRAPPC9-210ENST00000521667 CIRBPQ14011 172 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-210ENST00000521667 Q6ZTC4 211 aa12.71□□□□□ -0.38
TRAPPC9-210ENST00000521667 A0A0J9YWU9 116 aa12.7□□□□□ -0.38
TRAPPC9-210ENST00000521667 H3BNG1 76 aa12.7□□□□□ -0.38
TRAPPC9-210ENST00000521667 CLPSL2Q6UWE3 100 aa12.7□□□□□ -0.38
TRAPPC9-210ENST00000521667 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
TRAPPC9-210ENST00000521667 MGAM2Q2M2H8 2515 aa12.7□□□□□ -0.38
TRAPPC9-210ENST00000521667 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-210ENST00000521667 HERV-K104P63124 156 aa12.69□□□□□ -0.38
TRAPPC9-210ENST00000521667 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
TRAPPC9-210ENST00000521667 TSPAN13O95857 204 aa12.69□□□□□ -0.38
TRAPPC9-210ENST00000521667 C5orf38Q86SI9 138 aa12.69□□□□□ -0.38
TRAPPC9-210ENST00000521667 PRO1854Q9UHT4 67 aa12.69□□□□□ -0.38
TRAPPC9-210ENST00000521667 A0A0B4J2C4 111 aa12.68□□□□□ -0.38
TRAPPC9-210ENST00000521667 ANGP03950 147 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-210ENST00000521667 XCL1P47992 114 aa12.68□□□□□ -0.38
TRAPPC9-210ENST00000521667 Q8N3U1 123 aa12.68□□□□□ -0.38
TRAPPC9-210ENST00000521667 IFITM1P13164 125 aa12.67□□□□□ -0.38
TRAPPC9-210ENST00000521667 EIF4EBP3O60516 100 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC9-210ENST00000521667 LYPD5Q6UWN5 251 aa12.67□□□□□ -0.38
TRAPPC9-210ENST00000521667 TOMM7Q9P0U1 55 aa12.67□□□□□ -0.38
TRAPPC9-210ENST00000521667 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC9-210ENST00000521667 DAND5Q8N907 189 aa12.66□□□□□ -0.38
TRAPPC9-210ENST00000521667 NPC2P61916 151 aa12.66□□□□□ -0.38
TRAPPC9-210ENST00000521667 REG3AQ06141 175 aa12.66□□□□□ -0.38
TRAPPC9-210ENST00000521667 MEIG1Q5JSS6 88 aa12.66□□□□□ -0.38
TRAPPC9-210ENST00000521667 C11orf45Q8TAV5 145 aa12.65□□□□□ -0.38
TRAPPC9-210ENST00000521667 K7EIL1 84 aa12.64□□□□□ -0.39
TRAPPC9-210ENST00000521667 NANOS2P60321 138 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-210ENST00000521667 SPATA25Q9BR10 227 aa12.64□□□□□ -0.39
TRAPPC9-210ENST00000521667 LINC01561Q8N1V8 128 aa12.64□□□□□ -0.39
TRAPPC9-210ENST00000521667 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
TRAPPC9-210ENST00000521667 IGHV3-33P01772 117 aa12.62□□□□□ -0.39
TRAPPC9-210ENST00000521667 CD164L2Q6UWJ8 174 aa12.62□□□□□ -0.39
TRAPPC9-210ENST00000521667 LINC00308Q8TCZ7 52 aa12.62□□□□□ -0.39
TRAPPC9-210ENST00000521667 DNHD1Q96M86 4753 aa12.62□□□□□ -0.39
TRAPPC9-210ENST00000521667 CHCHD10Q8WYQ3 142 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-210ENST00000521667 TM2D3Q9BRN9 247 aa12.62□□□□□ -0.39
TRAPPC9-210ENST00000521667 DEFB131BA0A096LNP1 70 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 LOC107984156A0A0G2JMH3 177 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 OCIAD2Q56VL3 154 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 DEFB121Q5J5C9 76 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 ARL17AQ8IVW1 177 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 COPS9Q8WXC6 57 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 ERG28Q9UKR5 140 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 TENM3Q9P273 2699 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 SFTA2Q6UW10 78 aa12.61□□□□□ -0.39
TRAPPC9-210ENST00000521667 IGLV10-54A0A075B6I4 117 aa12.6□□□□□ -0.39
TRAPPC9-210ENST00000521667 LYRM7Q5U5X0 104 aa12.6□□□□□ -0.39
TRAPPC9-210ENST00000521667 MRAPQ8TCY5 172 aa12.59□□□□□ -0.39
TRAPPC9-210ENST00000521667 COX7A2LO14548 114 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms